Protein–RNA interactions for Protein: P52952

NKX2-5, Homeobox protein Nkx-2.5, humanhuman

Predicted RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5P52952 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
NKX2-5P52952 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC11.48□□□□□ -0.57
NKX2-5P52952 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC11.48□□□□□ -0.57
NKX2-5P52952 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC11.48□□□□□ -0.57
NKX2-5P52952 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC11.48□□□□□ -0.57
NKX2-5P52952 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC11.48□□□□□ -0.57
NKX2-5P52952 MIR4687-201ENST00000583618 80 ntBASIC11.48□□□□□ -0.57
NKX2-5P52952 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC11.48□□□□□ -0.57
NKX2-5P52952 AL445228.2-201ENST00000605589 952 ntBASIC11.48□□□□□ -0.57
NKX2-5P52952 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC11.48□□□□□ -0.57
NKX2-5P52952 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
NKX2-5P52952 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC11.48□□□□□ -0.57
NKX2-5P52952 CCDC120-207ENST00000606812 3857 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
NKX2-5P52952 AKAP10-201ENST00000225737 4072 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NKX2-5P52952 AXIN2-209ENST00000618960 4060 ntTSL 5 BASIC11.48□□□□□ -0.57
NKX2-5P52952 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NKX2-5P52952 BAHD1-202ENST00000560846 4432 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NKX2-5P52952 RHBDL3-203ENST00000536287 4470 ntTSL 2 BASIC11.48□□□□□ -0.57
NKX2-5P52952 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NKX2-5P52952 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NKX2-5P52952 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
NKX2-5P52952 AC007598.3-201ENST00000623077 1678 ntBASIC11.48□□□□□ -0.57
NKX2-5P52952 HERC2P9-206ENST00000529624 5187 ntBASIC11.48□□□□□ -0.57
NKX2-5P52952 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NKX2-5P52952 NAV1-203ENST00000367302 9685 ntTSL 5 BASIC11.48□□□□□ -0.57
NKX2-5P52952 SCML1-201ENST00000380041 1997 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
NKX2-5P52952 PRDM7-202ENST00000449207 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NKX2-5P52952 MTHFR-205ENST00000376592 8378 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
NKX2-5P52952 PDZRN3-203ENST00000462146 2927 ntTSL 2 BASIC11.48□□□□□ -0.57
NKX2-5P52952 FGD3-202ENST00000375482 3321 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
NKX2-5P52952 SEC23B-202ENST00000336714 3411 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NKX2-5P52952 SEC61A1-201ENST00000243253 3635 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NKX2-5P52952 FOXP4-201ENST00000307972 3745 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
NKX2-5P52952 SUPT5H-201ENST00000359191 3770 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NKX2-5P52952 AC006372.3-201ENST00000444158 4049 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
NKX2-5P52952 TBC1D16-202ENST00000340848 4244 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
NKX2-5P52952 TMEM170A-201ENST00000357613 4959 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
NKX2-5P52952 WNK4-201ENST00000246914 4001 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
NKX2-5P52952 LUZP1-201ENST00000302291 8898 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
NKX2-5P52952 NEK11-202ENST00000383366 2914 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
NKX2-5P52952 HLA-F-AS1-209ENST00000458236 2835 ntBASIC11.47□□□□□ -0.57
NKX2-5P52952 TAF6-213ENST00000472509 2551 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
NKX2-5P52952 FAM47A-202ENST00000613251 2518 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
NKX2-5P52952 CICP26-201ENST00000425003 2448 ntBASIC11.47□□□□□ -0.57
NKX2-5P52952 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
NKX2-5P52952 PMEL-215ENST00000550464 1867 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
NKX2-5P52952 KCNQ3-201ENST00000388996 11510 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
NKX2-5P52952 PCDHGB4-202ENST00000615384 4725 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
NKX2-5P52952 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC11.47□□□□□ -0.57
NKX2-5P52952 SLC12A3-201ENST00000262502 4208 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
NKX2-5P52952 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
NKX2-5P52952 PPT1-219ENST00000642050 4010 ntAPPRIS P2 BASIC11.47□□□□□ -0.57
NKX2-5P52952 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
NKX2-5P52952 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
NKX2-5P52952 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
NKX2-5P52952 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
NKX2-5P52952 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
NKX2-5P52952 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC11.47□□□□□ -0.57
NKX2-5P52952 MPV17-208ENST00000405076 603 ntTSL 5 BASIC11.47□□□□□ -0.57
NKX2-5P52952 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
NKX2-5P52952 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
NKX2-5P52952 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC11.47□□□□□ -0.57
NKX2-5P52952 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC11.47□□□□□ -0.57
NKX2-5P52952 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
NKX2-5P52952 SKP2-204ENST00000508514 821 ntTSL 3 BASIC11.47□□□□□ -0.57
NKX2-5P52952 IGHVIII-5-2-201ENST00000522505 261 ntBASIC11.47□□□□□ -0.57
NKX2-5P52952 TOLLIP-AS1-201ENST00000530897 939 ntBASIC11.47□□□□□ -0.57
NKX2-5P52952 AC243562.1-201ENST00000560672 389 ntBASIC11.47□□□□□ -0.57
NKX2-5P52952 LITAF-210ENST00000571976 548 ntTSL 2 BASIC11.47□□□□□ -0.57
NKX2-5P52952 LITAF-214ENST00000574703 486 ntTSL 2 BASIC11.47□□□□□ -0.57
NKX2-5P52952 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
NKX2-5P52952 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
NKX2-5P52952 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC11.47□□□□□ -0.57
NKX2-5P52952 RN7SL828P-201ENST00000607615 303 ntBASIC11.47□□□□□ -0.57
NKX2-5P52952 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC11.47□□□□□ -0.57
NKX2-5P52952 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC11.47□□□□□ -0.57
NKX2-5P52952 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
NKX2-5P52952 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
NKX2-5P52952 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
NKX2-5P52952 OSBPL7-201ENST00000007414 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
NKX2-5P52952 TTYH2-201ENST00000269346 3490 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
NKX2-5P52952 LIMK1-202ENST00000418310 3360 ntTSL 5 BASIC11.47□□□□□ -0.57
NKX2-5P52952 PSMD1-202ENST00000373635 3230 ntTSL 5 BASIC11.47□□□□□ -0.57
NKX2-5P52952 PDE6B-212ENST00000496514 3232 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
NKX2-5P52952 PROSER2-AS1-201ENST00000445498 3146 ntTSL 2 BASIC11.47□□□□□ -0.57
NKX2-5P52952 TMBIM1-214ENST00000444881 2936 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
NKX2-5P52952 C1QTNF3-202ENST00000382065 2802 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
NKX2-5P52952 TRAK1-202ENST00000341421 4620 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
NKX2-5P52952 AC092447.8-201ENST00000566570 4162 ntBASIC11.47□□□□□ -0.57
NKX2-5P52952 AC009078.3-201ENST00000624205 4084 ntBASIC11.47□□□□□ -0.57
NKX2-5P52952 LIF-201ENST00000249075 3969 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
NKX2-5P52952 PTGER3-206ENST00000370924 6982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
NKX2-5P52952 CCDC36-204ENST00000452691 2315 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
NKX2-5P52952 AC021517.1-202ENST00000585897 2111 ntTSL 5 BASIC11.47□□□□□ -0.57
NKX2-5P52952 ZSCAN21-201ENST00000292450 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
NKX2-5P52952 HRC-203ENST00000595625 2044 ntTSL 5 BASIC11.47□□□□□ -0.57
NKX2-5P52952 CDC45-201ENST00000263201 1976 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
NKX2-5P52952 ZNF595-203ENST00000608255 1999 ntTSL 2 BASIC11.47□□□□□ -0.57
NKX2-5P52952 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
NKX2-5P52952 TENM3-204ENST00000511685 10896 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms