RNA–Protein interactions for RNA: ENST00000536287.2

RHBDL3-203, Transcript of rhomboid like 3, humanhuman

TSL 2 BASIC

Gene RHBDL3, Length 4,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3-203ENST00000536287 DCAF8L2P0C7V8 631 aa20.53■□□□□ 0.88
RHBDL3-203ENST00000536287 NISCHQ9Y2I1 1504 aa20.04■□□□□ 0.8
RHBDL3-203ENST00000536287 SUPT5HO00267 1087 aaKnown RBP19.94■□□□□ 0.78
RHBDL3-203ENST00000536287 SHROOM4Q9ULL8 1493 aa19.55■□□□□ 0.72
RHBDL3-203ENST00000536287 EHMT2Q96KQ7 1210 aa19.16■□□□□ 0.66
RHBDL3-203ENST00000536287 PCGF6Q9BYE7 350 aa18.91■□□□□ 0.62
RHBDL3-203ENST00000536287 FAM9AQ8IZU1 332 aaPredicted RBP18.77■□□□□ 0.59
RHBDL3-203ENST00000536287 PELP1Q8IZL8 1130 aaKnown RBP18.63■□□□□ 0.57
RHBDL3-203ENST00000536287 APLP2Q06481 763 aa18.59■□□□□ 0.57
RHBDL3-203ENST00000536287 TTBK1Q5TCY1 1321 aaPredicted RBP18.55■□□□□ 0.56
RHBDL3-203ENST00000536287 ZEB1P37275 1124 aaPredicted RBP18.4■□□□□ 0.54
RHBDL3-203ENST00000536287 TRIM41Q8WV44 630 aa18.4■□□□□ 0.54
RHBDL3-203ENST00000536287 CCER1Q8TC90 406 aaPredicted RBP18.33■□□□□ 0.53
RHBDL3-203ENST00000536287 CENPBP07199 599 aaPredicted RBP18.33■□□□□ 0.52
RHBDL3-203ENST00000536287 RANGAP1P46060 587 aaPredicted RBP18.2■□□□□ 0.5
RHBDL3-203ENST00000536287 HRCP23327 699 aa18.12■□□□□ 0.49
RHBDL3-203ENST00000536287 UBTFP17480 764 aaKnown RBP18.08■□□□□ 0.48
RHBDL3-203ENST00000536287 PPARGC1BQ86YN6 1023 aaKnown RBP18.06■□□□□ 0.48
RHBDL3-203ENST00000536287 TRIM26Q12899 539 aaPredicted RBP18.05■□□□□ 0.48
RHBDL3-203ENST00000536287 CHIC1Q5VXU3 224 aa17.98■□□□□ 0.47
RHBDL3-203ENST00000536287 YTHDC1Q96MU7 727 aaKnown RBP17.98■□□□□ 0.47
RHBDL3-203ENST00000536287 LOC105371045A0A1W2PR82 267 aa17.96■□□□□ 0.47
RHBDL3-203ENST00000536287 ATP1B4Q9UN42 357 aaPredicted RBP17.89■□□□□ 0.45
RHBDL3-203ENST00000536287 ERICH6Q7L0X2 663 aa17.87■□□□□ 0.45
RHBDL3-203ENST00000536287 NEFLP07196 543 aa17.76■□□□□ 0.43
RHBDL3-203ENST00000536287 MYT1Q01538 1121 aa17.71■□□□□ 0.43
RHBDL3-203ENST00000536287 ABCC9O60706 1549 aa17.63■□□□□ 0.41
RHBDL3-203ENST00000536287 HNRNPUL2Q1KMD3 747 aaKnown RBP17.58■□□□□ 0.4
RHBDL3-203ENST00000536287 ITGAEP38570 1179 aa17.55■□□□□ 0.4
RHBDL3-203ENST00000536287 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.54■□□□□ 0.4
RHBDL3-203ENST00000536287 DIEXFQ68CQ4 756 aaKnown RBP17.45■□□□□ 0.38
RHBDL3-203ENST00000536287 POLR3GLQ9BT43 218 aa17.26■□□□□ 0.35
RHBDL3-203ENST00000536287 PABPN1Q86U42 306 aaKnown RBP eCLIP17.22■□□□□ 0.35
RHBDL3-203ENST00000536287 GTF3C3Q9Y5Q9 886 aa17.21■□□□□ 0.35
RHBDL3-203ENST00000536287 CNGB1Q14028 1251 aaPredicted RBP17.2■□□□□ 0.34
RHBDL3-203ENST00000536287 DAXXQ9UER7 740 aaPredicted RBP17.08■□□□□ 0.32
RHBDL3-203ENST00000536287 FAM50AQ14320 339 aaKnown RBP17.04■□□□□ 0.32
RHBDL3-203ENST00000536287 ZNF316A6NFI3 1004 aaPredicted RBP17.03■□□□□ 0.32
RHBDL3-203ENST00000536287 ACIN1Q9UKV3 1341 aaKnown RBP17■□□□□ 0.31
RHBDL3-203ENST00000536287 NEUROD1Q13562 356 aa17■□□□□ 0.31
RHBDL3-203ENST00000536287 BCANQ96GW7 911 aa17■□□□□ 0.31
RHBDL3-203ENST00000536287 MYT1LQ9UL68 1186 aa16.93■□□□□ 0.3
RHBDL3-203ENST00000536287 TRIM52Q96A61 297 aa16.88■□□□□ 0.29
RHBDL3-203ENST00000536287 CSRNP3Q8WYN3 585 aa16.88■□□□□ 0.29
RHBDL3-203ENST00000536287 RTL5Q5HYW3 569 aaPredicted RBP16.87■□□□□ 0.29
RHBDL3-203ENST00000536287 ANP32CO43423 234 aa16.86■□□□□ 0.29
RHBDL3-203ENST00000536287 DCAF1Q9Y4B6 1507 aa16.8■□□□□ 0.28
RHBDL3-203ENST00000536287 CLSPNQ9HAW4 1339 aa16.77■□□□□ 0.28
RHBDL3-203ENST00000536287 CDK11AQ9UQ88 783 aaPredicted RBP16.74■□□□□ 0.27
RHBDL3-203ENST00000536287 SLC4A1APQ9BWU0 796 aaKnown RBP16.72■□□□□ 0.27
RHBDL3-203ENST00000536287 ZNF326Q5BKZ1 582 aaKnown RBP16.72■□□□□ 0.27
RHBDL3-203ENST00000536287 P3H3Q8IVL6 736 aa16.66■□□□□ 0.26
RHBDL3-203ENST00000536287 ZCCHC6Q5VYS8 1495 aaKnown RBP16.63■□□□□ 0.25
RHBDL3-203ENST00000536287 SCAF1Q9H7N4 1312 aaKnown RBP16.61■□□□□ 0.25
RHBDL3-203ENST00000536287 FKBP8Q14318 412 aa16.57■□□□□ 0.24
RHBDL3-203ENST00000536287 MYO15BQ96JP2 1530 aa16.55■□□□□ 0.24
RHBDL3-203ENST00000536287 DDX10Q13206 875 aaKnown RBP16.53■□□□□ 0.24
RHBDL3-203ENST00000536287 ARID3CA6NKF2 412 aa16.52■□□□□ 0.24
RHBDL3-203ENST00000536287 MIER1Q8N108 512 aa16.48■□□□□ 0.23
RHBDL3-203ENST00000536287 HNRNPUQ00839 825 aaKnown RBP eCLIP16.46■□□□□ 0.23
RHBDL3-203ENST00000536287 TONSLQ96HA7 1378 aa16.45■□□□□ 0.22
RHBDL3-203ENST00000536287 FBLN2P98095 1184 aa16.45■□□□□ 0.22
RHBDL3-203ENST00000536287 SCRIBQ14160 1630 aa16.44■□□□□ 0.22
RHBDL3-203ENST00000536287 ANP32AP39687 249 aaKnown RBP16.44■□□□□ 0.22
RHBDL3-203ENST00000536287 NPM2Q86SE8 214 aaKnown RBP16.37■□□□□ 0.21
RHBDL3-203ENST00000536287 ZNF777Q9ULD5 760 aaPredicted RBP16.37■□□□□ 0.21
RHBDL3-203ENST00000536287 FAM9BQ8IZU0 186 aa16.37■□□□□ 0.21
RHBDL3-203ENST00000536287 CCDC180Q9P1Z9 1646 aa16.36■□□□□ 0.21
RHBDL3-203ENST00000536287 CANXP27824 592 aaKnown RBP16.35■□□□□ 0.21
RHBDL3-203ENST00000536287 HIRIP3Q9BW71 556 aaPredicted RBP16.3■□□□□ 0.2
RHBDL3-203ENST00000536287 BCL11AQ9H165 835 aa16.29■□□□□ 0.2
RHBDL3-203ENST00000536287 CLIP1P30622 1438 aa16.28■□□□□ 0.2
RHBDL3-203ENST00000536287 ZBTB47Q9UFB7 747 aaPredicted RBP16.28■□□□□ 0.2
RHBDL3-203ENST00000536287 CHIC2Q9UKJ5 165 aa16.27■□□□□ 0.19
RHBDL3-203ENST00000536287 RB1CC1Q8TDY2 1594 aa16.26■□□□□ 0.19
RHBDL3-203ENST00000536287 SALL2Q9Y467 1007 aaPredicted RBP16.25■□□□□ 0.19
RHBDL3-203ENST00000536287 RSF1Q96T23 1441 aaPredicted RBP16.25■□□□□ 0.19
RHBDL3-203ENST00000536287 CCDC136Q96JN2 1154 aa16.23■□□□□ 0.19
RHBDL3-203ENST00000536287 CEP162Q5TB80 1403 aa16.22■□□□□ 0.19
RHBDL3-203ENST00000536287 IRX6P78412 446 aaPredicted RBP16.22■□□□□ 0.19
RHBDL3-203ENST00000536287 MRS2Q9HD23 443 aa16.22■□□□□ 0.19
RHBDL3-203ENST00000536287 TMC1Q8TDI8 760 aa16.2■□□□□ 0.18
RHBDL3-203ENST00000536287 NEFMP07197 916 aa16.16■□□□□ 0.18
RHBDL3-203ENST00000536287 NBR1Q14596 966 aa16.16■□□□□ 0.18
RHBDL3-203ENST00000536287 MTUS2Q5JR59 1369 aa16.13■□□□□ 0.17
RHBDL3-203ENST00000536287 EEA1Q15075 1411 aa16.12■□□□□ 0.17
RHBDL3-203ENST00000536287 EIF5BO60841 1220 aaKnown RBP16.11■□□□□ 0.17
RHBDL3-203ENST00000536287 GOLGA3Q08378 1498 aa16.1■□□□□ 0.17
RHBDL3-203ENST00000536287 EIF4G2P78344 907 aaKnown RBP eCLIP16.1■□□□□ 0.17
RHBDL3-203ENST00000536287 SLC24A1O60721 1099 aa16.09■□□□□ 0.17
RHBDL3-203ENST00000536287 TNIKQ9UKE5 1360 aa16.07■□□□□ 0.16
RHBDL3-203ENST00000536287 KDM2AQ9Y2K7 1162 aa16.07■□□□□ 0.16
RHBDL3-203ENST00000536287 RRP7BPQ9NSQ0 103 aa16.06■□□□□ 0.16
RHBDL3-203ENST00000536287 UPF2Q9HAU5 1272 aaKnown RBP16.04■□□□□ 0.16
RHBDL3-203ENST00000536287 CHGAP10645 457 aaKnown RBP16.04■□□□□ 0.16
RHBDL3-203ENST00000536287 NACADO15069 1562 aa16.03■□□□□ 0.16
RHBDL3-203ENST00000536287 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.03■□□□□ 0.16
RHBDL3-203ENST00000536287 TSPY4P0CV99 314 aa16.02■□□□□ 0.15
RHBDL3-203ENST00000536287 TSPY10P0CW01 314 aa16.02■□□□□ 0.15
RHBDL3-203ENST00000536287 WRNQ14191 1432 aaPredicted RBP eCLIP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms