RNA–Protein interactions for RNA: ENST00000613251.1

FAM47A-202, Transcript of family with sequence similarity 47 member A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene FAM47A, Length 2,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM47A-202ENST00000613251 NISCHQ9Y2I1 1504 aa26.04■■□□□ 1.76
FAM47A-202ENST00000613251 CCDC180Q9P1Z9 1646 aa22.23■■□□□ 1.15
FAM47A-202ENST00000613251 ZCCHC6Q5VYS8 1495 aaKnown RBP22.01■■□□□ 1.11
FAM47A-202ENST00000613251 SHROOM4Q9ULL8 1493 aa22■■□□□ 1.11
FAM47A-202ENST00000613251 SUPT5HO00267 1087 aaKnown RBP21.52■■□□□ 1.04
FAM47A-202ENST00000613251 DCAF8L2P0C7V8 631 aa21.51■■□□□ 1.03
FAM47A-202ENST00000613251 DCAF1Q9Y4B6 1507 aa21.42■■□□□ 1.02
FAM47A-202ENST00000613251 CHIC1Q5VXU3 224 aa20.93■□□□□ 0.94
FAM47A-202ENST00000613251 MYO15BQ96JP2 1530 aa20.86■□□□□ 0.93
FAM47A-202ENST00000613251 SCRIBQ14160 1630 aa20.74■□□□□ 0.91
FAM47A-202ENST00000613251 ABCC9O60706 1549 aa20.73■□□□□ 0.91
FAM47A-202ENST00000613251 NACADO15069 1562 aa20.58■□□□□ 0.88
FAM47A-202ENST00000613251 RSF1Q96T23 1441 aaPredicted RBP20.55■□□□□ 0.88
FAM47A-202ENST00000613251 RB1CC1Q8TDY2 1594 aa20.31■□□□□ 0.84
FAM47A-202ENST00000613251 CECR2Q9BXF3 1484 aa20.29■□□□□ 0.84
FAM47A-202ENST00000613251 LOC105371045A0A1W2PR82 267 aa20.26■□□□□ 0.83
FAM47A-202ENST00000613251 MROH2BQ7Z745 1585 aa20.22■□□□□ 0.83
FAM47A-202ENST00000613251 WIZO95785 1651 aa20.09■□□□□ 0.81
FAM47A-202ENST00000613251 TRIM41Q8WV44 630 aa20.09■□□□□ 0.81
FAM47A-202ENST00000613251 PCGF6Q9BYE7 350 aa20.08■□□□□ 0.81
FAM47A-202ENST00000613251 HRCP23327 699 aa20.04■□□□□ 0.8
FAM47A-202ENST00000613251 BAZ1AQ9NRL2 1556 aaPredicted RBP20.01■□□□□ 0.79
FAM47A-202ENST00000613251 UNC13AQ9UPW8 1703 aa19.93■□□□□ 0.78
FAM47A-202ENST00000613251 FAM9AQ8IZU1 332 aaPredicted RBP19.87■□□□□ 0.77
FAM47A-202ENST00000613251 SMARCA4P51532 1647 aa19.85■□□□□ 0.77
FAM47A-202ENST00000613251 TOP2AP11388 1531 aaKnown RBP19.81■□□□□ 0.76
FAM47A-202ENST00000613251 EIF4G1Q04637 1599 aaKnown RBP19.81■□□□□ 0.76
FAM47A-202ENST00000613251 TRIM26Q12899 539 aaPredicted RBP19.79■□□□□ 0.76
FAM47A-202ENST00000613251 CCDC88BA6NC98 1476 aa19.71■□□□□ 0.75
FAM47A-202ENST00000613251 BICRAQ9NZM4 1560 aa19.71■□□□□ 0.75
FAM47A-202ENST00000613251 SMARCA2P51531 1590 aa19.69■□□□□ 0.74
FAM47A-202ENST00000613251 PABPN1Q86U42 306 aaKnown RBP eCLIP19.67■□□□□ 0.74
FAM47A-202ENST00000613251 EHMT2Q96KQ7 1210 aa19.66■□□□□ 0.74
FAM47A-202ENST00000613251 PPARGC1BQ86YN6 1023 aaKnown RBP19.6■□□□□ 0.73
FAM47A-202ENST00000613251 ABCC8Q09428 1581 aa19.58■□□□□ 0.72
FAM47A-202ENST00000613251 PEG3Q9GZU2 1588 aa19.51■□□□□ 0.71
FAM47A-202ENST00000613251 SOGA1O94964 1423 aa19.38■□□□□ 0.69
FAM47A-202ENST00000613251 ATAD2BQ9ULI0 1458 aa19.38■□□□□ 0.69
FAM47A-202ENST00000613251 ZEB1P37275 1124 aaPredicted RBP19.31■□□□□ 0.68
FAM47A-202ENST00000613251 EEA1Q15075 1411 aa19.31■□□□□ 0.68
FAM47A-202ENST00000613251 BAZ1BQ9UIG0 1483 aaKnown RBP19.3■□□□□ 0.68
FAM47A-202ENST00000613251 RUSC2Q8N2Y8 1516 aa19.29■□□□□ 0.68
FAM47A-202ENST00000613251 WRNQ14191 1432 aaPredicted RBP eCLIP19.29■□□□□ 0.68
FAM47A-202ENST00000613251 CSRNP3Q8WYN3 585 aa19.28■□□□□ 0.68
FAM47A-202ENST00000613251 TNIKQ9UKE5 1360 aa19.25■□□□□ 0.67
FAM47A-202ENST00000613251 CEP162Q5TB80 1403 aa19.24■□□□□ 0.67
FAM47A-202ENST00000613251 SYNJ1O43426 1573 aa19.2■□□□□ 0.66
FAM47A-202ENST00000613251 GOLGA3Q08378 1498 aa19.15■□□□□ 0.66
FAM47A-202ENST00000613251 UBTFP17480 764 aaKnown RBP19.14■□□□□ 0.65
FAM47A-202ENST00000613251 CEP164Q9UPV0 1460 aa19.06■□□□□ 0.64
FAM47A-202ENST00000613251 KIF21BO75037 1637 aa19.05■□□□□ 0.64
FAM47A-202ENST00000613251 NCAPD3P42695 1498 aa19.04■□□□□ 0.64
FAM47A-202ENST00000613251 HMGXB3Q12766 1538 aa19.03■□□□□ 0.64
FAM47A-202ENST00000613251 TOP2BQ02880 1626 aa19■□□□□ 0.63
FAM47A-202ENST00000613251 TTBK1Q5TCY1 1321 aaPredicted RBP18.99■□□□□ 0.63
FAM47A-202ENST00000613251 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.98■□□□□ 0.63
FAM47A-202ENST00000613251 BIVM-ERCC5R4GMW8 1640 aa18.95■□□□□ 0.62
FAM47A-202ENST00000613251 CCER1Q8TC90 406 aaPredicted RBP18.93■□□□□ 0.62
FAM47A-202ENST00000613251 RAPGEF2Q9Y4G8 1499 aa18.92■□□□□ 0.62
FAM47A-202ENST00000613251 CLIP1P30622 1438 aa18.91■□□□□ 0.62
FAM47A-202ENST00000613251 CFTRP13569 1480 aa18.84■□□□□ 0.61
FAM47A-202ENST00000613251 CUX1P39880 1505 aa18.84■□□□□ 0.61
FAM47A-202ENST00000613251 VPS8Q8N3P4 1428 aa18.82■□□□□ 0.6
FAM47A-202ENST00000613251 PRXQ9BXM0 1461 aa18.79■□□□□ 0.6
FAM47A-202ENST00000613251 ERICH3Q5RHP9 1530 aa18.77■□□□□ 0.6
FAM47A-202ENST00000613251 RANGAP1P46060 587 aaPredicted RBP18.73■□□□□ 0.59
FAM47A-202ENST00000613251 KIF27Q86VH2 1401 aa18.72■□□□□ 0.59
FAM47A-202ENST00000613251 APLP2Q06481 763 aa18.69■□□□□ 0.58
FAM47A-202ENST00000613251 PRDM2Q13029 1718 aa18.69■□□□□ 0.58
FAM47A-202ENST00000613251 CADPSQ9ULU8 1353 aa18.65■□□□□ 0.58
FAM47A-202ENST00000613251 ARAP1Q96P48 1450 aa18.64■□□□□ 0.57
FAM47A-202ENST00000613251 HNRNPUL2Q1KMD3 747 aaKnown RBP18.63■□□□□ 0.57
FAM47A-202ENST00000613251 CC2D2AQ9P2K1 1620 aa18.59■□□□□ 0.57
FAM47A-202ENST00000613251 CUX2O14529 1486 aa18.55■□□□□ 0.56
FAM47A-202ENST00000613251 IGF1RP08069 1367 aa18.54■□□□□ 0.56
FAM47A-202ENST00000613251 FGD5Q6ZNL6 1462 aa18.51■□□□□ 0.55
FAM47A-202ENST00000613251 ARHGAP35Q9NRY4 1499 aa18.5■□□□□ 0.55
FAM47A-202ENST00000613251 KANK4Q5T7N3 995 aaPredicted RBP18.49■□□□□ 0.55
FAM47A-202ENST00000613251 DIEXFQ68CQ4 756 aaKnown RBP18.49■□□□□ 0.55
FAM47A-202ENST00000613251 FANCD2Q9BXW9 1451 aa18.45■□□□□ 0.54
FAM47A-202ENST00000613251 CARMIL1Q5VZK9 1371 aa18.44■□□□□ 0.54
FAM47A-202ENST00000613251 ZNF316A6NFI3 1004 aaPredicted RBP18.42■□□□□ 0.54
FAM47A-202ENST00000613251 RRBP1Q9P2E9 1410 aaKnown RBP18.38■□□□□ 0.53
FAM47A-202ENST00000613251 DNMBPQ6XZF7 1577 aa18.37■□□□□ 0.53
FAM47A-202ENST00000613251 SCAF1Q9H7N4 1312 aaKnown RBP18.35■□□□□ 0.53
FAM47A-202ENST00000613251 NESP48681 1621 aa18.34■□□□□ 0.53
FAM47A-202ENST00000613251 TOPBP1Q92547 1522 aa18.33■□□□□ 0.53
FAM47A-202ENST00000613251 RAD54L2Q9Y4B4 1467 aa18.33■□□□□ 0.53
FAM47A-202ENST00000613251 ABCA10Q8WWZ4 1543 aa18.32■□□□□ 0.52
FAM47A-202ENST00000613251 POLA1P09884 1462 aaPredicted RBP18.31■□□□□ 0.52
FAM47A-202ENST00000613251 DHX57Q6P158 1386 aaKnown RBP18.3■□□□□ 0.52
FAM47A-202ENST00000613251 CCNB3Q8WWL7 1395 aa18.29■□□□□ 0.52
FAM47A-202ENST00000613251 MAP3K1Q13233 1512 aa18.29■□□□□ 0.52
FAM47A-202ENST00000613251 CLSPNQ9HAW4 1339 aa18.28■□□□□ 0.52
FAM47A-202ENST00000613251 TIAM1Q13009 1591 aa18.28■□□□□ 0.52
FAM47A-202ENST00000613251 ACIN1Q9UKV3 1341 aaKnown RBP18.26■□□□□ 0.51
FAM47A-202ENST00000613251 LAMC3Q9Y6N6 1575 aa18.23■□□□□ 0.51
FAM47A-202ENST00000613251 NEUROD1Q13562 356 aa18.22■□□□□ 0.51
FAM47A-202ENST00000613251 FHAD1B1AJZ9 1412 aa18.22■□□□□ 0.51
FAM47A-202ENST00000613251 URB2Q14146 1524 aaKnown RBP18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms