Protein–RNA interactions for Protein: P46098

HTR3A, 5-hydroxytryptamine receptor 3A, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3AP46098 RN7SL665P-201ENST00000578793 300 ntBASIC12.69□□□□□ -0.38
HTR3AP46098 MIR4754-201ENST00000582477 89 ntBASIC12.69□□□□□ -0.38
HTR3AP46098 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC12.69□□□□□ -0.38
HTR3AP46098 MIR6787-201ENST00000616675 61 ntBASIC12.69□□□□□ -0.38
HTR3AP46098 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
HTR3AP46098 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HTR3AP46098 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HTR3AP46098 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
HTR3AP46098 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HTR3AP46098 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
HTR3AP46098 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
HTR3AP46098 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC12.69□□□□□ -0.38
HTR3AP46098 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HTR3AP46098 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
HTR3AP46098 REXO5-208ENST00000564274 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HTR3AP46098 FOXN3-219ENST00000615335 2421 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
HTR3AP46098 CSF3R-201ENST00000331941 2375 ntTSL 5 BASIC12.69□□□□□ -0.38
HTR3AP46098 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
HTR3AP46098 LINC00846-201ENST00000334165 1778 ntTSL 2 BASIC12.69□□□□□ -0.38
HTR3AP46098 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC12.69□□□□□ -0.38
HTR3AP46098 ITGA2B-201ENST00000262407 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HTR3AP46098 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HTR3AP46098 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HTR3AP46098 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HTR3AP46098 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
HTR3AP46098 PHB-210ENST00000511832 1509 ntTSL 2 BASIC12.68□□□□□ -0.38
HTR3AP46098 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
HTR3AP46098 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HTR3AP46098 SARS-202ENST00000369923 1882 ntTSL 5 BASIC12.68□□□□□ -0.38
HTR3AP46098 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HTR3AP46098 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
HTR3AP46098 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
HTR3AP46098 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HTR3AP46098 PRKAB1-205ENST00000540121 1673 ntTSL 5 BASIC12.68□□□□□ -0.38
HTR3AP46098 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC12.68□□□□□ -0.38
HTR3AP46098 DUSP14-205ENST00000614411 2207 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
HTR3AP46098 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC12.68□□□□□ -0.38
HTR3AP46098 BEND6-202ENST00000370746 2379 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
HTR3AP46098 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HTR3AP46098 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC12.68□□□□□ -0.38
HTR3AP46098 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
HTR3AP46098 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
HTR3AP46098 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC12.68□□□□□ -0.38
HTR3AP46098 PDIA3P2-201ENST00000428073 158 ntBASIC12.68□□□□□ -0.38
HTR3AP46098 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC12.68□□□□□ -0.38
HTR3AP46098 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC12.68□□□□□ -0.38
HTR3AP46098 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC12.68□□□□□ -0.38
HTR3AP46098 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
HTR3AP46098 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
HTR3AP46098 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC12.68□□□□□ -0.38
HTR3AP46098 AC145285.5-201ENST00000562217 361 ntBASIC12.68□□□□□ -0.38
HTR3AP46098 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC12.68□□□□□ -0.38
HTR3AP46098 MIR3619-201ENST00000579667 83 ntBASIC12.68□□□□□ -0.38
HTR3AP46098 AC020922.3-201ENST00000595064 547 ntBASIC12.68□□□□□ -0.38
HTR3AP46098 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
HTR3AP46098 AL353770.1-201ENST00000614915 403 ntBASIC12.68□□□□□ -0.38
HTR3AP46098 CU633904.3-201ENST00000624042 1029 ntBASIC12.68□□□□□ -0.38
HTR3AP46098 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
HTR3AP46098 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
HTR3AP46098 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HTR3AP46098 IL10-202ENST00000423557 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HTR3AP46098 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
HTR3AP46098 C1RL-201ENST00000266542 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HTR3AP46098 NRP2-202ENST00000357118 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
HTR3AP46098 PEX1-201ENST00000248633 4385 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HTR3AP46098 TMOD1-201ENST00000259365 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HTR3AP46098 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
HTR3AP46098 SLC25A18-202ENST00000399813 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HTR3AP46098 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
HTR3AP46098 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC12.68□□□□□ -0.38
HTR3AP46098 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC12.67□□□□□ -0.38
HTR3AP46098 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
HTR3AP46098 DNMT3B-205ENST00000443239 2674 ntTSL 2 BASIC12.67□□□□□ -0.38
HTR3AP46098 OCA2-202ENST00000354638 3186 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
HTR3AP46098 GLIS3-202ENST00000381971 3961 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
HTR3AP46098 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
HTR3AP46098 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC12.67□□□□□ -0.38
HTR3AP46098 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC12.67□□□□□ -0.38
HTR3AP46098 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HTR3AP46098 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HTR3AP46098 ZNF197-204ENST00000383745 2935 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
HTR3AP46098 AL445250.1-201ENST00000641671 2259 ntBASIC12.67□□□□□ -0.38
HTR3AP46098 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
HTR3AP46098 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
HTR3AP46098 ZNF792-201ENST00000404801 3888 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
HTR3AP46098 COBLL1-225ENST00000629362 3868 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
HTR3AP46098 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HTR3AP46098 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC12.67□□□□□ -0.38
HTR3AP46098 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HTR3AP46098 TNRC18P1-201ENST00000502875 3650 ntBASIC12.67□□□□□ -0.38
HTR3AP46098 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
HTR3AP46098 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC12.67□□□□□ -0.38
HTR3AP46098 AP000358.1-201ENST00000456260 156 ntBASIC12.67□□□□□ -0.38
HTR3AP46098 RPL18AP8-201ENST00000486071 528 ntBASIC12.67□□□□□ -0.38
HTR3AP46098 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
HTR3AP46098 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC12.67□□□□□ -0.38
HTR3AP46098 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC12.67□□□□□ -0.38
HTR3AP46098 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
HTR3AP46098 GPR182-203ENST00000622922 591 ntBASIC12.67□□□□□ -0.38
HTR3AP46098 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms