Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC12.22□□□□□ -0.45
ZIC3O60481 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC12.22□□□□□ -0.45
ZIC3O60481 CRABP2-204ENST00000621784 1033 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
ZIC3O60481 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
ZIC3O60481 ESR1-214ENST00000638569 132 ntTSL 5 BASIC12.22□□□□□ -0.45
ZIC3O60481 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ZIC3O60481 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
ZIC3O60481 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ZIC3O60481 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ZIC3O60481 MMD2-203ENST00000406755 2372 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ZIC3O60481 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC12.22□□□□□ -0.45
ZIC3O60481 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ZIC3O60481 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ZIC3O60481 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC12.22□□□□□ -0.45
ZIC3O60481 FARS2-201ENST00000274680 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ZIC3O60481 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ZIC3O60481 NME1-209ENST00000511355 1645 ntTSL 5 BASIC12.22□□□□□ -0.45
ZIC3O60481 HNRNPL-210ENST00000600873 1633 ntTSL 5 BASIC12.22□□□□□ -0.45
ZIC3O60481 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
ZIC3O60481 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC12.22□□□□□ -0.45
ZIC3O60481 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ZIC3O60481 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ZIC3O60481 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
ZIC3O60481 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC12.21□□□□□ -0.45
ZIC3O60481 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
ZIC3O60481 KRT8P25-201ENST00000473150 1456 ntBASIC12.21□□□□□ -0.45
ZIC3O60481 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
ZIC3O60481 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
ZIC3O60481 AC020658.7-201ENST00000624274 2442 ntBASIC12.21□□□□□ -0.45
ZIC3O60481 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
ZIC3O60481 KIR3DL1-203ENST00000391728 1871 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
ZIC3O60481 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
ZIC3O60481 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC12.21□□□□□ -0.45
ZIC3O60481 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC12.21□□□□□ -0.45
ZIC3O60481 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
ZIC3O60481 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
ZIC3O60481 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
ZIC3O60481 ITGB1BP1-201ENST00000238091 1772 ntTSL 3 BASIC12.21□□□□□ -0.45
ZIC3O60481 GDA-203ENST00000376986 1771 ntTSL 2 BASIC12.21□□□□□ -0.45
ZIC3O60481 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC12.21□□□□□ -0.45
ZIC3O60481 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC12.21□□□□□ -0.45
ZIC3O60481 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
ZIC3O60481 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
ZIC3O60481 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
ZIC3O60481 RNA5SP491-201ENST00000362936 118 ntBASIC12.21□□□□□ -0.45
ZIC3O60481 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC12.21□□□□□ -0.45
ZIC3O60481 OLFML2B-202ENST00000367938 1153 ntTSL 2 BASIC12.21□□□□□ -0.45
ZIC3O60481 CHEK2-203ENST00000382565 696 ntTSL 5 BASIC12.21□□□□□ -0.45
ZIC3O60481 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
ZIC3O60481 AL355482.2-201ENST00000428646 1145 ntTSL 2 BASIC12.21□□□□□ -0.45
ZIC3O60481 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC12.21□□□□□ -0.45
ZIC3O60481 KRT18P46-201ENST00000435568 1279 ntBASIC12.21□□□□□ -0.45
ZIC3O60481 AL121787.1-202ENST00000445838 876 ntTSL 5 BASIC12.21□□□□□ -0.45
ZIC3O60481 AL161668.2-201ENST00000531638 492 ntTSL 5 BASIC12.21□□□□□ -0.45
ZIC3O60481 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
ZIC3O60481 AC073569.2-201ENST00000551995 354 ntTSL 5 BASIC12.21□□□□□ -0.45
ZIC3O60481 AL139316.1-201ENST00000555643 568 ntTSL 3 BASIC12.21□□□□□ -0.45
ZIC3O60481 AC026583.1-201ENST00000561310 569 ntTSL 4 BASIC12.21□□□□□ -0.45
ZIC3O60481 AC026470.4-201ENST00000565812 308 ntTSL 3 BASIC12.21□□□□□ -0.45
ZIC3O60481 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC12.21□□□□□ -0.45
ZIC3O60481 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC12.21□□□□□ -0.45
ZIC3O60481 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC12.21□□□□□ -0.45
ZIC3O60481 C19orf53-202ENST00000588234 873 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
ZIC3O60481 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
ZIC3O60481 KXD1-211ENST00000599319 707 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
ZIC3O60481 AC006483.2-201ENST00000609813 515 ntBASIC12.21□□□□□ -0.45
ZIC3O60481 HLA-C-210ENST00000640219 976 ntBASIC12.21□□□□□ -0.45
ZIC3O60481 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
ZIC3O60481 AC079781.5-202ENST00000641784 3743 ntBASIC12.21□□□□□ -0.45
ZIC3O60481 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
ZIC3O60481 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
ZIC3O60481 EFHC1-221ENST00000636489 2421 ntTSL 5 BASIC12.21□□□□□ -0.46
ZIC3O60481 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
ZIC3O60481 EHMT2-202ENST00000375530 3856 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
ZIC3O60481 HPGD-204ENST00000504433 1910 ntTSL 2 BASIC12.21□□□□□ -0.46
ZIC3O60481 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
ZIC3O60481 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
ZIC3O60481 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC12.21□□□□□ -0.46
ZIC3O60481 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
ZIC3O60481 CDC42-202ENST00000344548 2256 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.46
ZIC3O60481 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC12.2□□□□□ -0.46
ZIC3O60481 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ZIC3O60481 LTA-213ENST00000418386 1422 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ZIC3O60481 AC018904.2-201ENST00000561202 1757 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
ZIC3O60481 AP000437.1-201ENST00000624057 2085 ntBASIC12.2□□□□□ -0.46
ZIC3O60481 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
ZIC3O60481 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
ZIC3O60481 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ZIC3O60481 TBC1D3P1-201ENST00000590047 1693 ntBASIC12.2□□□□□ -0.46
ZIC3O60481 KLK4-201ENST00000324041 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ZIC3O60481 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ZIC3O60481 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC12.2□□□□□ -0.46
ZIC3O60481 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
ZIC3O60481 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
ZIC3O60481 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ZIC3O60481 CNGB1-202ENST00000311183 1633 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
ZIC3O60481 CDCA7L-201ENST00000356195 2915 ntTSL 2 BASIC12.2□□□□□ -0.46
ZIC3O60481 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ZIC3O60481 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
ZIC3O60481 HRH2-202ENST00000377291 2561 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms