Protein–RNA interactions for Protein: Q9GZM3

POLR2J2, DNA-directed RNA polymerase II subunit RPB11-b1, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2Q9GZM3 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
POLR2J2Q9GZM3 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC12.69□□□□□ -0.38
POLR2J2Q9GZM3 ZNF595-205ENST00000610261 2911 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
POLR2J2Q9GZM3 MARCH3-201ENST00000308660 4196 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
POLR2J2Q9GZM3 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
POLR2J2Q9GZM3 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
POLR2J2Q9GZM3 ARPIN-201ENST00000357484 7591 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
POLR2J2Q9GZM3 ACER1-201ENST00000301452 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
POLR2J2Q9GZM3 TRIM35-201ENST00000305364 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
POLR2J2Q9GZM3 RTL10-202ENST00000405640 6785 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
POLR2J2Q9GZM3 EPHA1-201ENST00000275815 3363 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
POLR2J2Q9GZM3 SCNN1B-202ENST00000343070 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
POLR2J2Q9GZM3 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
POLR2J2Q9GZM3 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
POLR2J2Q9GZM3 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
POLR2J2Q9GZM3 DGKZ-204ENST00000454345 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
POLR2J2Q9GZM3 TNFRSF8-201ENST00000263932 3686 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
POLR2J2Q9GZM3 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
POLR2J2Q9GZM3 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
POLR2J2Q9GZM3 AC018735.1-201ENST00000437208 1502 ntBASIC12.68□□□□□ -0.38
POLR2J2Q9GZM3 BTBD3-204ENST00000405977 5137 ntAPPRIS P4 TSL 5 BASIC12.68□□□□□ -0.38
POLR2J2Q9GZM3 FRMPD2B-201ENST00000431305 1347 ntBASIC12.68□□□□□ -0.38
POLR2J2Q9GZM3 TNFRSF8-203ENST00000417814 3593 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
POLR2J2Q9GZM3 KLHL7-202ENST00000339077 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
POLR2J2Q9GZM3 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC12.68□□□□□ -0.38
POLR2J2Q9GZM3 AC040160.2-201ENST00000623816 1675 ntBASIC12.68□□□□□ -0.38
POLR2J2Q9GZM3 TSC22D1-203ENST00000458659 4820 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
POLR2J2Q9GZM3 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
POLR2J2Q9GZM3 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC12.68□□□□□ -0.38
POLR2J2Q9GZM3 PDZRN3-208ENST00000479530 2778 ntTSL 2 BASIC12.68□□□□□ -0.38
POLR2J2Q9GZM3 SECISBP2-201ENST00000339901 3320 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
POLR2J2Q9GZM3 FAM237B-201ENST00000637645 3877 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
POLR2J2Q9GZM3 DYSF-203ENST00000409366 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
POLR2J2Q9GZM3 DYSF-205ENST00000409651 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
POLR2J2Q9GZM3 PHF13-201ENST00000377648 3681 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
POLR2J2Q9GZM3 ITGA3-201ENST00000007722 3665 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
POLR2J2Q9GZM3 ZNF277-201ENST00000361822 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
POLR2J2Q9GZM3 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
POLR2J2Q9GZM3 KRT17P5-201ENST00000332088 839 ntBASIC12.68□□□□□ -0.38
POLR2J2Q9GZM3 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
POLR2J2Q9GZM3 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
POLR2J2Q9GZM3 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
POLR2J2Q9GZM3 SSR4P1-201ENST00000415143 412 ntBASIC12.68□□□□□ -0.38
POLR2J2Q9GZM3 AC003958.1-201ENST00000435883 421 ntBASIC12.68□□□□□ -0.38
POLR2J2Q9GZM3 AC004898.1-201ENST00000451057 766 ntBASIC12.68□□□□□ -0.38
POLR2J2Q9GZM3 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
POLR2J2Q9GZM3 CD164-210ENST00000512821 964 ntTSL 2 BASIC12.68□□□□□ -0.38
POLR2J2Q9GZM3 IGHV3-71-201ENST00000523324 359 ntBASIC12.68□□□□□ -0.38
POLR2J2Q9GZM3 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC12.68□□□□□ -0.38
POLR2J2Q9GZM3 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
POLR2J2Q9GZM3 MIR4259-201ENST00000584466 101 ntBASIC12.68□□□□□ -0.38
POLR2J2Q9GZM3 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
POLR2J2Q9GZM3 HPN-206ENST00000597419 1212 ntTSL 5 BASIC12.68□□□□□ -0.38
POLR2J2Q9GZM3 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC12.68□□□□□ -0.38
POLR2J2Q9GZM3 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC12.68□□□□□ -0.38
POLR2J2Q9GZM3 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC12.68□□□□□ -0.38
POLR2J2Q9GZM3 AL033527.4-201ENST00000641026 673 ntBASIC12.68□□□□□ -0.38
POLR2J2Q9GZM3 SEZ6-202ENST00000335960 4195 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
POLR2J2Q9GZM3 ZNF185-205ENST00000370270 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
POLR2J2Q9GZM3 PCDHB17P-202ENST00000623466 3066 ntBASIC12.68□□□□□ -0.38
POLR2J2Q9GZM3 AC015921.1-201ENST00000574885 2546 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
POLR2J2Q9GZM3 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
POLR2J2Q9GZM3 ZBED2-201ENST00000317012 2311 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
POLR2J2Q9GZM3 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
POLR2J2Q9GZM3 RPS27L-201ENST00000330964 6434 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
POLR2J2Q9GZM3 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
POLR2J2Q9GZM3 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC12.68□□□□□ -0.38
POLR2J2Q9GZM3 CACNB1-202ENST00000394303 3742 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
POLR2J2Q9GZM3 LINC01756-201ENST00000417651 2148 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
POLR2J2Q9GZM3 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
POLR2J2Q9GZM3 DRD2-208ENST00000542968 2467 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
POLR2J2Q9GZM3 KCNJ11-201ENST00000339994 2801 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
POLR2J2Q9GZM3 FAM71E2-201ENST00000424985 3191 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
POLR2J2Q9GZM3 INPP5J-201ENST00000331075 3347 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
POLR2J2Q9GZM3 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC12.68□□□□□ -0.38
POLR2J2Q9GZM3 ARHGAP45-210ENST00000590214 4191 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
POLR2J2Q9GZM3 DDC-204ENST00000426377 1700 ntTSL 3 BASIC12.68□□□□□ -0.38
POLR2J2Q9GZM3 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
POLR2J2Q9GZM3 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
POLR2J2Q9GZM3 COL6A2-204ENST00000409416 3430 ntTSL 5 BASIC12.68□□□□□ -0.38
POLR2J2Q9GZM3 ZNF124-202ENST00000472531 2243 ntTSL 2 BASIC12.68□□□□□ -0.38
POLR2J2Q9GZM3 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC12.68□□□□□ -0.38
POLR2J2Q9GZM3 B4GALT4-201ENST00000359213 2385 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
POLR2J2Q9GZM3 FLNA-203ENST00000369850 8382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
POLR2J2Q9GZM3 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC12.67□□□□□ -0.38
POLR2J2Q9GZM3 SYMPK-214ENST00000599814 6537 ntTSL 2 BASIC12.67□□□□□ -0.38
POLR2J2Q9GZM3 TACC2-209ENST00000369004 3667 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
POLR2J2Q9GZM3 DPP8-204ENST00000358939 2822 ntTSL 2 BASIC12.67□□□□□ -0.38
POLR2J2Q9GZM3 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
POLR2J2Q9GZM3 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
POLR2J2Q9GZM3 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
POLR2J2Q9GZM3 SGSM3-201ENST00000248929 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
POLR2J2Q9GZM3 PAX2-203ENST00000370296 4140 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
POLR2J2Q9GZM3 PAX2-205ENST00000428433 4126 ntTSL 5 BASIC12.67□□□□□ -0.38
POLR2J2Q9GZM3 PDE4A-204ENST00000440014 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
POLR2J2Q9GZM3 MESD-201ENST00000261758 4264 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
POLR2J2Q9GZM3 H1FX-AS1-201ENST00000383461 2600 ntTSL 2 BASIC12.67□□□□□ -0.38
POLR2J2Q9GZM3 KCND1-201ENST00000218176 4437 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
POLR2J2Q9GZM3 MKL1-210ENST00000614754 3917 ntTSL 5 BASIC12.67□□□□□ -0.38
POLR2J2Q9GZM3 SPAG5-AS1-201ENST00000414744 2143 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms