Protein–RNA interactions for Protein: P56539

CAV3, Caveolin-3, humanhuman

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAV3P56539 DPH2-202ENST00000396758 1738 ntTSL 3 BASIC12.27□□□□□ -0.45
CAV3P56539 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
CAV3P56539 C12orf56-201ENST00000333722 3936 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CAV3P56539 USP38-201ENST00000307017 7009 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CAV3P56539 MCM7-213ENST00000621318 3084 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CAV3P56539 HMGCS1-201ENST00000325110 3506 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CAV3P56539 LINC00115-201ENST00000473798 1317 ntBASIC12.27□□□□□ -0.45
CAV3P56539 TCF3-220ENST00000611869 4409 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
CAV3P56539 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC12.27□□□□□ -0.45
CAV3P56539 ZNF133-201ENST00000316358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
CAV3P56539 ILDR1-201ENST00000273691 2659 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
CAV3P56539 LDLRAD4-201ENST00000359446 8486 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CAV3P56539 DFFB-201ENST00000338895 3105 ntTSL 2 BASIC12.27□□□□□ -0.45
CAV3P56539 RPS6KC1-209ENST00000615329 4022 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CAV3P56539 ERBB2-202ENST00000406381 4564 ntTSL 5 BASIC12.27□□□□□ -0.45
CAV3P56539 GJB5-201ENST00000338513 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CAV3P56539 C1QTNF9-202ENST00000382071 1854 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
CAV3P56539 RBM15-201ENST00000369784 4244 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CAV3P56539 SPTB-202ENST00000389720 6321 ntTSL 5 BASIC12.27□□□□□ -0.45
CAV3P56539 ABCB9-201ENST00000280560 3517 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
CAV3P56539 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CAV3P56539 LIMS1-205ENST00000410093 1526 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CAV3P56539 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CAV3P56539 GATAD2A-203ENST00000404158 5776 ntAPPRIS ALT1 TSL 2 BASIC12.26□□□□□ -0.45
CAV3P56539 RNF170-206ENST00000527424 3880 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CAV3P56539 TJAP1-202ENST00000372444 2778 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
CAV3P56539 TJAP1-203ENST00000372445 2751 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CAV3P56539 LDLR-203ENST00000535915 2768 ntTSL 2 BASIC12.26□□□□□ -0.45
CAV3P56539 RBPJ-203ENST00000345843 1682 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CAV3P56539 ITPRIP-201ENST00000278071 6807 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CAV3P56539 PARD6B-201ENST00000371610 4615 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CAV3P56539 HSP90AA1-202ENST00000334701 3510 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CAV3P56539 UBTF-206ENST00000527034 3010 ntTSL 5 BASIC12.26□□□□□ -0.45
CAV3P56539 MLX-203ENST00000435881 2428 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CAV3P56539 TNRC6C-207ENST00000588847 8527 ntAPPRIS P4 TSL 5 BASIC12.26□□□□□ -0.45
CAV3P56539 ALDH1A2-204ENST00000537372 3700 ntTSL 2 BASIC12.26□□□□□ -0.45
CAV3P56539 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC12.26□□□□□ -0.45
CAV3P56539 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
CAV3P56539 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
CAV3P56539 AC103592.1-201ENST00000394513 664 ntBASIC12.26□□□□□ -0.45
CAV3P56539 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CAV3P56539 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
CAV3P56539 RPS2P32-201ENST00000439199 892 ntBASIC12.26□□□□□ -0.45
CAV3P56539 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC12.26□□□□□ -0.45
CAV3P56539 Z93015.1-201ENST00000451718 390 ntBASIC12.26□□□□□ -0.45
CAV3P56539 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC12.26□□□□□ -0.45
CAV3P56539 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
CAV3P56539 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC12.26□□□□□ -0.45
CAV3P56539 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
CAV3P56539 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC12.26□□□□□ -0.45
CAV3P56539 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
CAV3P56539 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC12.26□□□□□ -0.45
CAV3P56539 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC12.26□□□□□ -0.45
CAV3P56539 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
CAV3P56539 RN7SL560P-201ENST00000577943 264 ntBASIC12.26□□□□□ -0.45
CAV3P56539 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CAV3P56539 CYGB-203ENST00000589145 788 ntTSL 3 BASIC12.26□□□□□ -0.45
CAV3P56539 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC12.26□□□□□ -0.45
CAV3P56539 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC12.26□□□□□ -0.45
CAV3P56539 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC12.26□□□□□ -0.45
CAV3P56539 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC12.26□□□□□ -0.45
CAV3P56539 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC12.26□□□□□ -0.45
CAV3P56539 CU639417.6-202ENST00000624872 3241 ntTSL 5 BASIC12.26□□□□□ -0.45
CAV3P56539 CORO7-PAM16-202ENST00000572467 3284 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
CAV3P56539 TUBB1P2-201ENST00000422712 1306 ntBASIC12.26□□□□□ -0.45
CAV3P56539 TUBB1P1-201ENST00000503144 1300 ntBASIC12.26□□□□□ -0.45
CAV3P56539 SPACA6P-AS-201ENST00000602324 3962 ntTSL 2 BASIC12.26□□□□□ -0.45
CAV3P56539 COL6A3-203ENST00000353578 9963 ntTSL 5 BASIC12.26□□□□□ -0.45
CAV3P56539 BDH1-201ENST00000358186 3330 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
CAV3P56539 SH3KBP1-202ENST00000379698 2678 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CAV3P56539 MED24-204ENST00000394128 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CAV3P56539 HAS3-202ENST00000306560 4220 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CAV3P56539 DRAM1-201ENST00000258534 3519 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CAV3P56539 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC12.26□□□□□ -0.45
CAV3P56539 PLOD3-201ENST00000223127 2920 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
CAV3P56539 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC12.26□□□□□ -0.45
CAV3P56539 OFD1-203ENST00000380567 3736 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
CAV3P56539 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC12.26□□□□□ -0.45
CAV3P56539 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CAV3P56539 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
CAV3P56539 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC12.26□□□□□ -0.45
CAV3P56539 ARPIN-201ENST00000357484 7591 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CAV3P56539 SERPINA13P-201ENST00000469935 1718 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CAV3P56539 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
CAV3P56539 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
CAV3P56539 AC008040.5-201ENST00000599781 1781 ntBASIC12.25□□□□□ -0.45
CAV3P56539 MYT1-201ENST00000328439 5535 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CAV3P56539 KIF9-207ENST00000444589 2791 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CAV3P56539 NTRK2-203ENST00000323115 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CAV3P56539 CHMP4C-201ENST00000297265 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CAV3P56539 FZD7-201ENST00000286201 3859 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
CAV3P56539 BSCL2-206ENST00000405837 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CAV3P56539 GNPDA1-210ENST00000508177 2980 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CAV3P56539 DDX11-223ENST00000542838 3079 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CAV3P56539 EEF2K-201ENST00000263026 7388 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
CAV3P56539 ORMDL2-201ENST00000243045 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CAV3P56539 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CAV3P56539 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CAV3P56539 VPS52-218ENST00000482399 3338 ntTSL 2 BASIC12.25□□□□□ -0.45
CAV3P56539 CDHR5-202ENST00000358353 3635 ntAPPRIS P4 TSL 5 BASIC12.25□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms