RNA–Protein interactions for RNA: ENST00000338895.7

DFFB-201, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 2 BASIC

Gene DFFB, Length 3,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-201ENST00000338895 NISCHQ9Y2I1 1504 aa26.84■■□□□ 1.89
DFFB-201ENST00000338895 SHROOM4Q9ULL8 1493 aa23.51■■□□□ 1.35
DFFB-201ENST00000338895 DCAF8L2P0C7V8 631 aa23.22■■□□□ 1.31
DFFB-201ENST00000338895 SUPT5HO00267 1087 aaKnown RBP23.03■■□□□ 1.28
DFFB-201ENST00000338895 ZCCHC6Q5VYS8 1495 aaKnown RBP22.6■■□□□ 1.21
DFFB-201ENST00000338895 CCDC180Q9P1Z9 1646 aa22.57■■□□□ 1.2
DFFB-201ENST00000338895 CHIC1Q5VXU3 224 aa21.98■■□□□ 1.11
DFFB-201ENST00000338895 MYO15BQ96JP2 1530 aa21.78■■□□□ 1.08
DFFB-201ENST00000338895 ABCC9O60706 1549 aa21.71■■□□□ 1.07
DFFB-201ENST00000338895 DCAF1Q9Y4B6 1507 aa21.71■■□□□ 1.07
DFFB-201ENST00000338895 SCRIBQ14160 1630 aa21.64■■□□□ 1.05
DFFB-201ENST00000338895 LOC105371045A0A1W2PR82 267 aa21.59■■□□□ 1.05
DFFB-201ENST00000338895 EHMT2Q96KQ7 1210 aa21.49■■□□□ 1.03
DFFB-201ENST00000338895 PCGF6Q9BYE7 350 aa21.46■■□□□ 1.03
DFFB-201ENST00000338895 FAM9AQ8IZU1 332 aaPredicted RBP21.4■■□□□ 1.02
DFFB-201ENST00000338895 RSF1Q96T23 1441 aaPredicted RBP21.32■■□□□ 1
DFFB-201ENST00000338895 TRIM41Q8WV44 630 aa21.27■■□□□ 1
DFFB-201ENST00000338895 CECR2Q9BXF3 1484 aa21.18■□□□□ 0.98
DFFB-201ENST00000338895 RB1CC1Q8TDY2 1594 aa21.09■□□□□ 0.97
DFFB-201ENST00000338895 NACADO15069 1562 aa21.06■□□□□ 0.96
DFFB-201ENST00000338895 HRCP23327 699 aa21.05■□□□□ 0.96
DFFB-201ENST00000338895 MROH2BQ7Z745 1585 aa20.99■□□□□ 0.95
DFFB-201ENST00000338895 PPARGC1BQ86YN6 1023 aaKnown RBP20.98■□□□□ 0.95
DFFB-201ENST00000338895 PABPN1Q86U42 306 aaKnown RBP eCLIP20.96■□□□□ 0.95
DFFB-201ENST00000338895 WIZO95785 1651 aa20.86■□□□□ 0.93
DFFB-201ENST00000338895 TRIM26Q12899 539 aaPredicted RBP20.78■□□□□ 0.92
DFFB-201ENST00000338895 TTBK1Q5TCY1 1321 aaPredicted RBP20.7■□□□□ 0.9
DFFB-201ENST00000338895 BAZ1AQ9NRL2 1556 aaPredicted RBP20.61■□□□□ 0.89
DFFB-201ENST00000338895 ABCC8Q09428 1581 aa20.5■□□□□ 0.87
DFFB-201ENST00000338895 CCDC88BA6NC98 1476 aa20.47■□□□□ 0.87
DFFB-201ENST00000338895 SMARCA4P51532 1647 aa20.44■□□□□ 0.86
DFFB-201ENST00000338895 UNC13AQ9UPW8 1703 aa20.43■□□□□ 0.86
DFFB-201ENST00000338895 UBTFP17480 764 aaKnown RBP20.4■□□□□ 0.86
DFFB-201ENST00000338895 RANGAP1P46060 587 aaPredicted RBP20.37■□□□□ 0.85
DFFB-201ENST00000338895 TOP2AP11388 1531 aaKnown RBP20.36■□□□□ 0.85
DFFB-201ENST00000338895 SOGA1O94964 1423 aa20.32■□□□□ 0.84
DFFB-201ENST00000338895 SMARCA2P51531 1590 aa20.3■□□□□ 0.84
DFFB-201ENST00000338895 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.27■□□□□ 0.84
DFFB-201ENST00000338895 BICRAQ9NZM4 1560 aa20.25■□□□□ 0.83
DFFB-201ENST00000338895 RUSC2Q8N2Y8 1516 aa20.22■□□□□ 0.83
DFFB-201ENST00000338895 CSRNP3Q8WYN3 585 aa20.22■□□□□ 0.83
DFFB-201ENST00000338895 EIF4G1Q04637 1599 aaKnown RBP20.18■□□□□ 0.82
DFFB-201ENST00000338895 CCER1Q8TC90 406 aaPredicted RBP20.17■□□□□ 0.82
DFFB-201ENST00000338895 ZEB1P37275 1124 aaPredicted RBP20.15■□□□□ 0.82
DFFB-201ENST00000338895 WRNQ14191 1432 aaPredicted RBP eCLIP20.1■□□□□ 0.81
DFFB-201ENST00000338895 CEP162Q5TB80 1403 aa20.1■□□□□ 0.81
DFFB-201ENST00000338895 BAZ1BQ9UIG0 1483 aaKnown RBP20.07■□□□□ 0.8
DFFB-201ENST00000338895 ATAD2BQ9ULI0 1458 aa20.05■□□□□ 0.8
DFFB-201ENST00000338895 TNIKQ9UKE5 1360 aa19.95■□□□□ 0.78
DFFB-201ENST00000338895 HNRNPUL2Q1KMD3 747 aaKnown RBP19.93■□□□□ 0.78
DFFB-201ENST00000338895 SYNJ1O43426 1573 aa19.9■□□□□ 0.78
DFFB-201ENST00000338895 APLP2Q06481 763 aa19.88■□□□□ 0.77
DFFB-201ENST00000338895 GOLGA3Q08378 1498 aa19.88■□□□□ 0.77
DFFB-201ENST00000338895 EEA1Q15075 1411 aa19.86■□□□□ 0.77
DFFB-201ENST00000338895 PEG3Q9GZU2 1588 aa19.82■□□□□ 0.76
DFFB-201ENST00000338895 CLIP1P30622 1438 aa19.78■□□□□ 0.76
DFFB-201ENST00000338895 RAPGEF2Q9Y4G8 1499 aa19.76■□□□□ 0.75
DFFB-201ENST00000338895 CEP164Q9UPV0 1460 aa19.75■□□□□ 0.75
DFFB-201ENST00000338895 ITGAEP38570 1179 aa19.59■□□□□ 0.73
DFFB-201ENST00000338895 DIEXFQ68CQ4 756 aaKnown RBP19.59■□□□□ 0.73
DFFB-201ENST00000338895 NCAPD3P42695 1498 aa19.58■□□□□ 0.73
DFFB-201ENST00000338895 ATP1B4Q9UN42 357 aaPredicted RBP19.56■□□□□ 0.72
DFFB-201ENST00000338895 VPS8Q8N3P4 1428 aa19.55■□□□□ 0.72
DFFB-201ENST00000338895 TOP2BQ02880 1626 aa19.53■□□□□ 0.72
DFFB-201ENST00000338895 KIF21BO75037 1637 aa19.53■□□□□ 0.72
DFFB-201ENST00000338895 KANK4Q5T7N3 995 aaPredicted RBP19.52■□□□□ 0.72
DFFB-201ENST00000338895 P3H3Q8IVL6 736 aa19.51■□□□□ 0.71
DFFB-201ENST00000338895 CUX1P39880 1505 aa19.5■□□□□ 0.71
DFFB-201ENST00000338895 KIF27Q86VH2 1401 aa19.48■□□□□ 0.71
DFFB-201ENST00000338895 HMGXB3Q12766 1538 aa19.45■□□□□ 0.7
DFFB-201ENST00000338895 YTHDC1Q96MU7 727 aaKnown RBP19.44■□□□□ 0.7
DFFB-201ENST00000338895 CFTRP13569 1480 aa19.43■□□□□ 0.7
DFFB-201ENST00000338895 SCAF1Q9H7N4 1312 aaKnown RBP19.42■□□□□ 0.7
DFFB-201ENST00000338895 CUX2O14529 1486 aa19.41■□□□□ 0.7
DFFB-201ENST00000338895 PRXQ9BXM0 1461 aa19.38■□□□□ 0.69
DFFB-201ENST00000338895 ZNF316A6NFI3 1004 aaPredicted RBP19.38■□□□□ 0.69
DFFB-201ENST00000338895 CADPSQ9ULU8 1353 aa19.37■□□□□ 0.69
DFFB-201ENST00000338895 BIVM-ERCC5R4GMW8 1640 aa19.35■□□□□ 0.69
DFFB-201ENST00000338895 ARAP1Q96P48 1450 aa19.35■□□□□ 0.69
DFFB-201ENST00000338895 NEUROD1Q13562 356 aa19.33■□□□□ 0.69
DFFB-201ENST00000338895 IGF1RP08069 1367 aa19.29■□□□□ 0.68
DFFB-201ENST00000338895 DNAJC5BQ9UF47 199 aa19.29■□□□□ 0.68
DFFB-201ENST00000338895 CARMIL1Q5VZK9 1371 aa19.27■□□□□ 0.68
DFFB-201ENST00000338895 CC2D2AQ9P2K1 1620 aa19.27■□□□□ 0.68
DFFB-201ENST00000338895 FGD5Q6ZNL6 1462 aa19.26■□□□□ 0.67
DFFB-201ENST00000338895 NESP48681 1621 aa19.25■□□□□ 0.67
DFFB-201ENST00000338895 ERICH3Q5RHP9 1530 aa19.25■□□□□ 0.67
DFFB-201ENST00000338895 FAM50AQ14320 339 aaKnown RBP19.24■□□□□ 0.67
DFFB-201ENST00000338895 ACIN1Q9UKV3 1341 aaKnown RBP19.22■□□□□ 0.67
DFFB-201ENST00000338895 ARHGAP35Q9NRY4 1499 aa19.22■□□□□ 0.67
DFFB-201ENST00000338895 RAD54L2Q9Y4B4 1467 aa19.21■□□□□ 0.67
DFFB-201ENST00000338895 MIER1Q8N108 512 aa19.21■□□□□ 0.67
DFFB-201ENST00000338895 FANCD2Q9BXW9 1451 aa19.2■□□□□ 0.66
DFFB-201ENST00000338895 CENPBP07199 599 aaPredicted RBP19.2■□□□□ 0.66
DFFB-201ENST00000338895 GTF3C3Q9Y5Q9 886 aa19.16■□□□□ 0.66
DFFB-201ENST00000338895 CCNB3Q8WWL7 1395 aa19.12■□□□□ 0.65
DFFB-201ENST00000338895 TDRD9Q8NDG6 1382 aaKnown RBP19.11■□□□□ 0.65
DFFB-201ENST00000338895 DHX57Q6P158 1386 aaKnown RBP19.1■□□□□ 0.65
DFFB-201ENST00000338895 ARID3CA6NKF2 412 aa19.08■□□□□ 0.65
DFFB-201ENST00000338895 FHOD3Q2V2M9 1422 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms