Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
APPP05067 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
APPP05067 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
APPP05067 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
APPP05067 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
APPP05067 PXK-210ENST00000479241 2817 ntTSL 2 BASIC16.46■□□□□ 0.23
APPP05067 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
APPP05067 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
APPP05067 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
APPP05067 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
APPP05067 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
APPP05067 FAM153C-201ENST00000398106 1510 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
APPP05067 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC16.46■□□□□ 0.23
APPP05067 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
APPP05067 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
APPP05067 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
APPP05067 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC16.46■□□□□ 0.23
APPP05067 AL031056.1-202ENST00000635954 2193 ntTSL 5 BASIC16.46■□□□□ 0.23
APPP05067 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
APPP05067 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
APPP05067 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
APPP05067 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
APPP05067 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
APPP05067 AC073210.1-201ENST00000414799 232 ntBASIC16.46■□□□□ 0.23
APPP05067 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
APPP05067 PFN2-202ENST00000423691 911 ntTSL 2 BASIC16.46■□□□□ 0.23
APPP05067 KRT18P62-201ENST00000446618 1287 ntBASIC16.46■□□□□ 0.23
APPP05067 AC104784.1-201ENST00000473096 294 ntBASIC16.46■□□□□ 0.23
APPP05067 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC16.46■□□□□ 0.23
APPP05067 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC16.46■□□□□ 0.23
APPP05067 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
APPP05067 CFL1-206ENST00000527344 962 ntTSL 2 BASIC16.46■□□□□ 0.23
APPP05067 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
APPP05067 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC16.46■□□□□ 0.23
APPP05067 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
APPP05067 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC16.46■□□□□ 0.23
APPP05067 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
APPP05067 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
APPP05067 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
APPP05067 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
APPP05067 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
APPP05067 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
APPP05067 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
APPP05067 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
APPP05067 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
APPP05067 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
APPP05067 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC16.45■□□□□ 0.22
APPP05067 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
APPP05067 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
APPP05067 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
APPP05067 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
APPP05067 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
APPP05067 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
APPP05067 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
APPP05067 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
APPP05067 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
APPP05067 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
APPP05067 RB1-201ENST00000267163 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
APPP05067 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
APPP05067 AL445209.1-201ENST00000607269 3491 ntBASIC16.45■□□□□ 0.22
APPP05067 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC16.45■□□□□ 0.22
APPP05067 CAPN5-201ENST00000278559 4397 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
APPP05067 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
APPP05067 ZNF654-204ENST00000636215 6446 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
APPP05067 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
APPP05067 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
APPP05067 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
APPP05067 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
APPP05067 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC16.45■□□□□ 0.22
APPP05067 HNRNPA1P2-207ENST00000432375 960 ntBASIC16.45■□□□□ 0.22
APPP05067 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC16.45■□□□□ 0.22
APPP05067 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC16.45■□□□□ 0.22
APPP05067 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
APPP05067 AC002044.2-201ENST00000624910 970 ntBASIC16.45■□□□□ 0.22
APPP05067 RETN-203ENST00000629642 400 ntTSL 5 BASIC16.45■□□□□ 0.22
APPP05067 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC16.45■□□□□ 0.22
APPP05067 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
APPP05067 COASY-202ENST00000421097 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
APPP05067 TMEM254-213ENST00000613758 2154 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
APPP05067 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
APPP05067 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC16.45■□□□□ 0.22
APPP05067 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
APPP05067 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
APPP05067 ABI2-202ENST00000261017 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
APPP05067 KCNS2-202ENST00000521839 4340 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
APPP05067 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
APPP05067 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC16.45■□□□□ 0.22
APPP05067 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC16.45■□□□□ 0.22
APPP05067 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
APPP05067 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
APPP05067 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC16.44■□□□□ 0.22
APPP05067 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
APPP05067 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
APPP05067 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
APPP05067 DANT2-201ENST00000430756 2079 ntTSL 3 BASIC16.44■□□□□ 0.22
APPP05067 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC16.44■□□□□ 0.22
APPP05067 ZNF493-208ENST00000599461 1769 ntBASIC16.44■□□□□ 0.22
APPP05067 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
APPP05067 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC16.44■□□□□ 0.22
APPP05067 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms