Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC13.8□□□□□ -0.2
KDELR3O43731 MIR5196-201ENST00000578146 115 ntBASIC13.8□□□□□ -0.2
KDELR3O43731 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
KDELR3O43731 MECP2-213ENST00000622433 1071 ntTSL 5 BASIC13.8□□□□□ -0.2
KDELR3O43731 AC011471.3-201ENST00000623576 402 ntBASIC13.8□□□□□ -0.2
KDELR3O43731 TPPP3-205ENST00000564104 1736 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
KDELR3O43731 TAGLN3-205ENST00000478951 1301 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
KDELR3O43731 C7orf49-214ENST00000620897 1349 ntTSL 3 BASIC13.8□□□□□ -0.2
KDELR3O43731 PIGG-217ENST00000509768 3121 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
KDELR3O43731 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
KDELR3O43731 MRRF-201ENST00000297908 1841 ntTSL 2 BASIC13.8□□□□□ -0.2
KDELR3O43731 MKL1-212ENST00000618417 1842 ntTSL 5 BASIC13.8□□□□□ -0.2
KDELR3O43731 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
KDELR3O43731 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
KDELR3O43731 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
KDELR3O43731 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
KDELR3O43731 SRPRA-201ENST00000332118 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
KDELR3O43731 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
KDELR3O43731 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
KDELR3O43731 NME1-209ENST00000511355 1645 ntTSL 5 BASIC13.79□□□□□ -0.2
KDELR3O43731 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
KDELR3O43731 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
KDELR3O43731 FARS2-201ENST00000274680 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
KDELR3O43731 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
KDELR3O43731 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
KDELR3O43731 CHRNA2-201ENST00000240132 1735 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
KDELR3O43731 AC025271.4-201ENST00000621477 1726 ntBASIC13.79□□□□□ -0.2
KDELR3O43731 SLC45A2-201ENST00000296589 1772 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
KDELR3O43731 HSD3B2-206ENST00000543831 1783 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
KDELR3O43731 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
KDELR3O43731 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC13.79□□□□□ -0.2
KDELR3O43731 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
KDELR3O43731 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC13.79□□□□□ -0.2
KDELR3O43731 DRD2-210ENST00000544518 2473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
KDELR3O43731 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
KDELR3O43731 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
KDELR3O43731 RPL10L-201ENST00000298283 812 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
KDELR3O43731 ZMAT5-201ENST00000344318 899 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
KDELR3O43731 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
KDELR3O43731 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
KDELR3O43731 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
KDELR3O43731 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
KDELR3O43731 TBC1D3P6-201ENST00000505954 962 ntBASIC13.79□□□□□ -0.2
KDELR3O43731 SCAMP5-216ENST00000568081 710 ntTSL 2 BASIC13.79□□□□□ -0.2
KDELR3O43731 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC13.79□□□□□ -0.2
KDELR3O43731 RN7SL134P-201ENST00000579756 303 ntBASIC13.79□□□□□ -0.2
KDELR3O43731 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC13.79□□□□□ -0.2
KDELR3O43731 MIR4472-1-201ENST00000584349 80 ntBASIC13.79□□□□□ -0.2
KDELR3O43731 C19orf53-202ENST00000588234 873 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
KDELR3O43731 AC008972.2-201ENST00000606587 494 ntBASIC13.79□□□□□ -0.2
KDELR3O43731 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
KDELR3O43731 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
KDELR3O43731 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
KDELR3O43731 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
KDELR3O43731 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
KDELR3O43731 ZNRF4-201ENST00000222033 1426 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
KDELR3O43731 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
KDELR3O43731 SEC13-203ENST00000383801 1479 ntTSL 2 BASIC13.79□□□□□ -0.2
KDELR3O43731 ZCCHC12-201ENST00000310164 2231 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
KDELR3O43731 RNF121-211ENST00000530137 2202 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
KDELR3O43731 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC13.79□□□□□ -0.2
KDELR3O43731 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
KDELR3O43731 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC13.79□□□□□ -0.2
KDELR3O43731 DRD3-201ENST00000295881 1541 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
KDELR3O43731 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
KDELR3O43731 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC13.79□□□□□ -0.2
KDELR3O43731 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
KDELR3O43731 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
KDELR3O43731 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
KDELR3O43731 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC13.79□□□□□ -0.2
KDELR3O43731 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
KDELR3O43731 GABRR2-201ENST00000402938 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
KDELR3O43731 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
KDELR3O43731 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
KDELR3O43731 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
KDELR3O43731 CSNK1G3-201ENST00000345990 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
KDELR3O43731 DMBT1P1-203ENST00000636837 4628 ntBASIC13.78□□□□□ -0.2
KDELR3O43731 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC13.78□□□□□ -0.2
KDELR3O43731 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
KDELR3O43731 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
KDELR3O43731 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC13.78□□□□□ -0.2
KDELR3O43731 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC13.78□□□□□ -0.2
KDELR3O43731 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
KDELR3O43731 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
KDELR3O43731 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
KDELR3O43731 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
KDELR3O43731 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC13.78□□□□□ -0.2
KDELR3O43731 LINC02026-202ENST00000414309 772 ntTSL 3 BASIC13.78□□□□□ -0.2
KDELR3O43731 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC13.78□□□□□ -0.2
KDELR3O43731 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC13.78□□□□□ -0.2
KDELR3O43731 ASS1P2-201ENST00000439895 1223 ntBASIC13.78□□□□□ -0.2
KDELR3O43731 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC13.78□□□□□ -0.2
KDELR3O43731 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
KDELR3O43731 TMEM106A-201ENST00000536052 1181 ntTSL 2 BASIC13.78□□□□□ -0.2
KDELR3O43731 AC026583.1-201ENST00000561310 569 ntTSL 4 BASIC13.78□□□□□ -0.2
KDELR3O43731 LINC01996-201ENST00000573270 1273 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
KDELR3O43731 MIR4750-201ENST00000584564 56 ntBASIC13.78□□□□□ -0.2
KDELR3O43731 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC13.78□□□□□ -0.2
KDELR3O43731 LINC00431-202ENST00000636375 159 ntBASIC13.78□□□□□ -0.2
KDELR3O43731 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms