Protein–RNA interactions for Protein: P26368

U2AF2, Splicing factor U2AF 65 kDa subunit, humanhuman

Known RBP eCLIP

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF2P26368 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.033e-6■□□□□ 10.6
U2AF2P26368 MTMR4-204ENST00000579925 5622 ntTSL 5 BASIC14.77□□□□□ -0.053e-6■□□□□ 10.6
U2AF2P26368 ATF6B-212ENST00000468502 564 ntTSL 213.33□□□□□ -0.283e-6■□□□□ 10.6
U2AF2P26368 ARAP1-205ENST00000426523 4066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.433e-6■□□□□ 10.6
U2AF2P26368 PUM1-208ENST00000471894 812 ntTSL 312.08□□□□□ -0.487e-17■□□□□ 10.6
U2AF2P26368 ARAP1-207ENST00000429686 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.483e-6■□□□□ 10.6
U2AF2P26368 MTMR4-201ENST00000323456 5839 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.563e-6■□□□□ 10.6
U2AF2P26368 MTMR4-207ENST00000582663 572 ntTSL 410.85□□□□□ -0.673e-6■□□□□ 10.6
U2AF2P26368 NDUFV3-201ENST00000340344 4676 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.722e-6■□□□□ 10.6
U2AF2P26368 TSNAX-201ENST00000366639 2650 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.743e-6■□□□□ 10.6
U2AF2P26368 PPTC7-202ENST00000548721 1471 ntTSL 210.43□□□□□ -0.743e-6■□□□□ 10.6
U2AF2P26368 PUM1-212ENST00000498627 422 ntTSL 29.21□□□□□ -0.941e-8■□□□□ 10.6
U2AF2P26368 MTMR4-210ENST00000583966 439 ntTSL 29.12□□□□□ -0.953e-6■□□□□ 10.6
U2AF2P26368 CCNB1-206ENST00000508407 780 ntTSL 28.42□□□□□ -1.063e-6■□□□□ 10.6
U2AF2P26368 TSNAX-203ENST00000475168 5629 ntTSL 27.27□□□□□ -1.253e-6■□□□□ 10.6
U2AF2P26368 ACVR1-205ENST00000413751 536 ntTSL 46.6□□□□□ -1.353e-6■□□□□ 10.6
U2AF2P26368 PUM1-220ENST00000529846 683 ntTSL 36.04□□□□□ -1.441e-8■□□□□ 10.6
U2AF2P26368 PUM1-216ENST00000525997 650 ntTSL 35.98□□□□□ -1.451e-8■□□□□ 10.6
U2AF2P26368 AGFG1-208ENST00000486932 566 ntTSL 45.62□□□□□ -1.518e-9■□□□□ 10.6
U2AF2P26368 NT5DC3-202ENST00000415849 799 ntTSL 55.41□□□□□ -1.543e-6■□□□□ 10.6
U2AF2P26368 PCM1-219ENST00000523540 640 ntTSL 22.36□□□□□ -2.031e-20■□□□□ 10.6
U2AF2P26368 TACC1-206ENST00000519093 6447 ntTSL 1 (best)8.26□□□□□ -1.091e-7■□□□□ 10.6
U2AF2P26368 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC27.45■■□□□ 1.981e-7■□□□□ 10.6
U2AF2P26368 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC25.76■■□□□ 1.711e-7■□□□□ 10.6
U2AF2P26368 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC24.67■■□□□ 1.541e-7■□□□□ 10.6
U2AF2P26368 FPGS-218ENST00000489522 561 ntTSL 524.48■■□□□ 1.511e-7■□□□□ 10.6
U2AF2P26368 FPGS-207ENST00000460181 2206 ntTSL 1 (best)22.9■■□□□ 1.261e-7■□□□□ 10.6
U2AF2P26368 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.221e-7■□□□□ 10.6
U2AF2P26368 FPGS-208ENST00000467826 829 ntTSL 522.07■■□□□ 1.121e-7■□□□□ 10.6
U2AF2P26368 FPGS-217ENST00000488506 649 ntTSL 521.68■■□□□ 1.061e-7■□□□□ 10.6
U2AF2P26368 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC21.06■□□□□ 0.961e-7■□□□□ 10.6
U2AF2P26368 FPGS-220ENST00000497386 1060 ntTSL 219.63■□□□□ 0.731e-7■□□□□ 10.6
U2AF2P26368 FPGS-216ENST00000488307 1172 ntTSL 519.44■□□□□ 0.71e-7■□□□□ 10.6
U2AF2P26368 FPGS-205ENST00000423577 677 ntTSL 518.3■□□□□ 0.521e-7■□□□□ 10.6
U2AF2P26368 FPGS-206ENST00000431857 959 ntTSL 516.5■□□□□ 0.231e-7■□□□□ 10.6
U2AF2P26368 BISPR-203ENST00000634577 563 ntTSL 415.61■□□□□ 0.091e-7■□□□□ 10.6
U2AF2P26368 BISPR-212ENST00000635536 989 ntTSL 215.61■□□□□ 0.091e-7■□□□□ 10.6
U2AF2P26368 BISPR-208ENST00000635060 1059 ntTSL 515.43■□□□□ 0.061e-7■□□□□ 10.6
U2AF2P26368 FPGS-214ENST00000479375 690 ntTSL 515.2■□□□□ 0.021e-7■□□□□ 10.6
U2AF2P26368 BISPR-211ENST00000635435 1505 ntTSL 1 (best)14.2□□□□□ -0.141e-7■□□□□ 10.6
U2AF2P26368 BISPR-206ENST00000634813 456 ntTSL 412.46□□□□□ -0.411e-7■□□□□ 10.6
U2AF2P26368 BISPR-209ENST00000635176 1041 ntTSL 2 BASIC11.18□□□□□ -0.621e-7■□□□□ 10.6
U2AF2P26368 CNOT2-206ENST00000547780 582 ntTSL 524.51■■□□□ 1.518e-8■□□□□ 10.6
U2AF2P26368 CNOT2-236ENST00000552231 1545 ntTSL 219.39■□□□□ 0.698e-8■□□□□ 10.6
U2AF2P26368 CNOT2-220ENST00000549750 1085 ntTSL 515.14■□□□□ 0.018e-8■□□□□ 10.6
U2AF2P26368 CNOT2-241ENST00000552915 1071 ntTSL 513.86□□□□□ -0.198e-8■□□□□ 10.6
U2AF2P26368 CNOT2-239ENST00000552483 895 ntTSL 512.27□□□□□ -0.458e-8■□□□□ 10.6
U2AF2P26368 CNOT2-205ENST00000547321 577 ntTSL 211.76□□□□□ -0.538e-8■□□□□ 10.6
U2AF2P26368 CNOT2-228ENST00000551132 618 ntTSL 311.76□□□□□ -0.538e-8■□□□□ 10.6
U2AF2P26368 CNOT2-242ENST00000553020 576 ntTSL 511.76□□□□□ -0.538e-8■□□□□ 10.6
U2AF2P26368 CNOT2-243ENST00000553078 440 ntTSL 311.76□□□□□ -0.538e-8■□□□□ 10.6
U2AF2P26368 CNOT2-232ENST00000551661 571 ntTSL 410.74□□□□□ -0.698e-8■□□□□ 10.6
U2AF2P26368 CNOT2-207ENST00000547867 571 ntTSL 410.07□□□□□ -0.88e-8■□□□□ 10.6
U2AF2P26368 CNOT2-208ENST00000548021 724 ntTSL 29.87□□□□□ -0.838e-8■□□□□ 10.6
U2AF2P26368 CNOT2-214ENST00000548741 536 ntTSL 49.87□□□□□ -0.838e-8■□□□□ 10.6
U2AF2P26368 CNOT2-225ENST00000550641 964 ntTSL 59.87□□□□□ -0.838e-8■□□□□ 10.6
U2AF2P26368 CNOT2-217ENST00000549443 457 ntTSL 48.41□□□□□ -1.068e-8■□□□□ 10.6
U2AF2P26368 CNOT2-237ENST00000552319 783 ntTSL 58.41□□□□□ -1.068e-8■□□□□ 10.6
U2AF2P26368 CNOT2-238ENST00000552422 443 ntTSL 37.5□□□□□ -1.218e-8■□□□□ 10.6
U2AF2P26368 CNOT2-212ENST00000548599 643 ntTSL 57.3□□□□□ -1.248e-8■□□□□ 10.6
U2AF2P26368 CNOT2-224ENST00000550194 747 ntTSL 57.3□□□□□ -1.248e-8■□□□□ 10.6
U2AF2P26368 CNOT2-234ENST00000551873 677 ntTSL 57.3□□□□□ -1.248e-8■□□□□ 10.6
U2AF2P26368 SNHG1-216ENST00000541416 996 ntTSL 213.28□□□□□ -0.281e-14■□□□□ 10.6
U2AF2P26368 FNTA-204ENST00000525699 516 ntTSL 528.91■■■□□ 2.222e-7■□□□□ 10.6
U2AF2P26368 IRAK1-201ENST00000369973 2358 ntTSL 528.64■■■□□ 2.182e-7■□□□□ 10.6
U2AF2P26368 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC28.59■■■□□ 2.172e-7■□□□□ 10.6
U2AF2P26368 FNTA-214ENST00000533998 581 ntTSL 328.39■■■□□ 2.142e-7■□□□□ 10.6
U2AF2P26368 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC27.8■■■□□ 2.046e-9■□□□□ 10.6
U2AF2P26368 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.972e-7■□□□□ 10.6
U2AF2P26368 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.842e-7■□□□□ 10.6
U2AF2P26368 FNTA-202ENST00000524546 750 ntTSL 325.78■■□□□ 1.722e-7■□□□□ 10.6
U2AF2P26368 FNTA-212ENST00000533383 982 ntTSL 525.78■■□□□ 1.722e-7■□□□□ 10.6
U2AF2P26368 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC25.55■■□□□ 1.682e-7■□□□□ 10.6
U2AF2P26368 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.662e-7■□□□□ 10.6
U2AF2P26368 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC25.33■■□□□ 1.652e-7■□□□□ 10.6
U2AF2P26368 RPL27-208ENST00000593262 1872 ntTSL 222.69■■□□□ 1.221e-10■□□□□ 10.6
U2AF2P26368 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC22.61■■□□□ 1.212e-7■□□□□ 10.6
U2AF2P26368 ASCC2-210ENST00000460313 568 ntTSL 222.44■■□□□ 1.182e-7■□□□□ 10.6
U2AF2P26368 ASCC2-206ENST00000449900 580 ntTSL 322.39■■□□□ 1.172e-7■□□□□ 10.6
U2AF2P26368 IRAK1-210ENST00000455690 784 ntTSL 322.38■■□□□ 1.172e-7■□□□□ 10.6
U2AF2P26368 FNTA-206ENST00000527153 582 ntTSL 322.35■■□□□ 1.172e-7■□□□□ 10.6
U2AF2P26368 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.152e-7■□□□□ 10.6
U2AF2P26368 NABP1-210ENST00000491331 855 ntTSL 222.05■■□□□ 1.122e-7■□□□□ 10.6
U2AF2P26368 USP40-217ENST00000496298 665 ntTSL 221.63■■□□□ 1.052e-7■□□□□ 10.6
U2AF2P26368 ASCC2-208ENST00000454854 469 ntTSL 420.96■□□□□ 0.952e-7■□□□□ 10.6
U2AF2P26368 ASCC2-221ENST00000495681 536 ntTSL 520.96■□□□□ 0.952e-7■□□□□ 10.6
U2AF2P26368 ASCC2-222ENST00000495967 554 ntTSL 420.96■□□□□ 0.952e-7■□□□□ 10.6
U2AF2P26368 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC20.46■□□□□ 0.872e-7■□□□□ 10.6
U2AF2P26368 NABP1-208ENST00000462712 961 ntTSL 219.86■□□□□ 0.772e-7■□□□□ 10.6
U2AF2P26368 INF2-208ENST00000481338 1102 ntTSL 219.73■□□□□ 0.752e-7■□□□□ 10.6
U2AF2P26368 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC19.15■□□□□ 0.662e-7■□□□□ 10.6
U2AF2P26368 IRAK1-208ENST00000444230 1125 ntTSL 519.08■□□□□ 0.642e-7■□□□□ 10.6
U2AF2P26368 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.642e-7■□□□□ 10.6
U2AF2P26368 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.562e-7■□□□□ 10.6
U2AF2P26368 IRAK1-209ENST00000444254 783 ntTSL 518.54■□□□□ 0.562e-7■□□□□ 10.6
U2AF2P26368 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.541e-10■□□□□ 10.6
U2AF2P26368 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC18.04■□□□□ 0.482e-7■□□□□ 10.6
U2AF2P26368 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.413e-8■□□□□ 10.6
U2AF2P26368 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC17.26■□□□□ 0.352e-7■□□□□ 10.6
U2AF2P26368 FNTA-205ENST00000526755 4676 ntTSL 1 (best)17.05■□□□□ 0.322e-7■□□□□ 10.6
Retrieved 100 of 36,523 protein–RNA pairs in 633.1 ms