RNA–Protein interactions for RNA: ENST00000529846.5

PUM1-220, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 3

Gene PUM1, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-220ENST00000529846 NISCHQ9Y2I1 1504 aa12.49□□□□□ -0.41
PUM1-220ENST00000529846 AEBP2Q6ZN18 517 aaPredicted RBP12.2□□□□□ -0.46
PUM1-220ENST00000529846 CHIC1Q5VXU3 224 aa12.07□□□□□ -0.48
PUM1-220ENST00000529846 CCDC180Q9P1Z9 1646 aa11.06□□□□□ -0.64
PUM1-220ENST00000529846 PHF23Q9BUL5 403 aaPredicted RBP10.68□□□□□ -0.7
PUM1-220ENST00000529846 ABCC9O60706 1549 aa10.63□□□□□ -0.71
PUM1-220ENST00000529846 MYO15BQ96JP2 1530 aa10.48□□□□□ -0.73
PUM1-220ENST00000529846 DCAF1Q9Y4B6 1507 aa10.43□□□□□ -0.74
PUM1-220ENST00000529846 NACADO15069 1562 aa10.43□□□□□ -0.74
PUM1-220ENST00000529846 ZCCHC6Q5VYS8 1495 aaKnown RBP10.41□□□□□ -0.74
PUM1-220ENST00000529846 RB1CC1Q8TDY2 1594 aa10.39□□□□□ -0.75
PUM1-220ENST00000529846 DCAF8L2P0C7V8 631 aa10.38□□□□□ -0.75
PUM1-220ENST00000529846 SENP3Q9H4L4 574 aaPredicted RBP10.23□□□□□ -0.77
PUM1-220ENST00000529846 SHROOM4Q9ULL8 1493 aa10.09□□□□□ -0.79
PUM1-220ENST00000529846 SCRIBQ14160 1630 aa9.98□□□□□ -0.81
PUM1-220ENST00000529846 PABPN1Q86U42 306 aaKnown RBP eCLIP9.96□□□□□ -0.82
PUM1-220ENST00000529846 BICRAQ9NZM4 1560 aa9.95□□□□□ -0.82
PUM1-220ENST00000529846 UNC13AQ9UPW8 1703 aa9.94□□□□□ -0.82
PUM1-220ENST00000529846 PLPPR3Q6T4P5 718 aa9.87□□□□□ -0.83
PUM1-220ENST00000529846 EIF4G1Q04637 1599 aaKnown RBP9.73□□□□□ -0.85
PUM1-220ENST00000529846 BAZ1AQ9NRL2 1556 aaPredicted RBP9.71□□□□□ -0.86
PUM1-220ENST00000529846 SMARCA2P51531 1590 aa9.63□□□□□ -0.87
PUM1-220ENST00000529846 DNAJC5BQ9UF47 199 aa9.63□□□□□ -0.87
PUM1-220ENST00000529846 NCAPD3P42695 1498 aa9.63□□□□□ -0.87
PUM1-220ENST00000529846 CECR2Q9BXF3 1484 aa9.63□□□□□ -0.87
PUM1-220ENST00000529846 CC2D2AQ9P2K1 1620 aa9.63□□□□□ -0.87
PUM1-220ENST00000529846 SMARCA4P51532 1647 aa9.62□□□□□ -0.87
PUM1-220ENST00000529846 PEG3Q9GZU2 1588 aa9.6□□□□□ -0.87
PUM1-220ENST00000529846 ATAD2BQ9ULI0 1458 aa9.59□□□□□ -0.87
PUM1-220ENST00000529846 HMGXB3Q12766 1538 aa9.56□□□□□ -0.88
PUM1-220ENST00000529846 MROH2BQ7Z745 1585 aa9.55□□□□□ -0.88
PUM1-220ENST00000529846 RSF1Q96T23 1441 aaPredicted RBP9.55□□□□□ -0.88
PUM1-220ENST00000529846 BAZ1BQ9UIG0 1483 aaKnown RBP9.53□□□□□ -0.88
PUM1-220ENST00000529846 FOXD1Q16676 465 aa9.52□□□□□ -0.89
PUM1-220ENST00000529846 TOP2AP11388 1531 aaKnown RBP9.42□□□□□ -0.9
PUM1-220ENST00000529846 WIZO95785 1651 aa9.42□□□□□ -0.9
PUM1-220ENST00000529846 SUPT5HO00267 1087 aaKnown RBP9.36□□□□□ -0.91
PUM1-220ENST00000529846 PPP6R1Q9UPN7 881 aa9.35□□□□□ -0.91
PUM1-220ENST00000529846 CADPSQ9ULU8 1353 aa9.35□□□□□ -0.91
PUM1-220ENST00000529846 ADRA2BP18089 450 aa9.34□□□□□ -0.91
PUM1-220ENST00000529846 LAMC3Q9Y6N6 1575 aa9.33□□□□□ -0.92
PUM1-220ENST00000529846 PDS5BQ9NTI5 1447 aa9.32□□□□□ -0.92
PUM1-220ENST00000529846 CCDC88BA6NC98 1476 aa9.3□□□□□ -0.92
PUM1-220ENST00000529846 CFTRP13569 1480 aa9.29□□□□□ -0.92
PUM1-220ENST00000529846 ERCC6Q03468 1493 aa9.23□□□□□ -0.93
PUM1-220ENST00000529846 ABCC8Q09428 1581 aa9.2□□□□□ -0.94
PUM1-220ENST00000529846 NESP48681 1621 aa9.19□□□□□ -0.94
PUM1-220ENST00000529846 FANCD2Q9BXW9 1451 aa9.18□□□□□ -0.94
PUM1-220ENST00000529846 CEP164Q9UPV0 1460 aa9.17□□□□□ -0.94
PUM1-220ENST00000529846 CUX2O14529 1486 aa9.15□□□□□ -0.94
PUM1-220ENST00000529846 MRC2Q9UBG0 1479 aa9.14□□□□□ -0.95
PUM1-220ENST00000529846 PRDM2Q13029 1718 aa9.13□□□□□ -0.95
PUM1-220ENST00000529846 WDR62O43379 1518 aa9.09□□□□□ -0.95
PUM1-220ENST00000529846 KIF21AQ7Z4S6 1674 aa9.06□□□□□ -0.96
PUM1-220ENST00000529846 THOC2Q8NI27 1593 aaKnown RBP9.05□□□□□ -0.96
PUM1-220ENST00000529846 DNMBPQ6XZF7 1577 aa9.04□□□□□ -0.96
PUM1-220ENST00000529846 URB2Q14146 1524 aaKnown RBP9.03□□□□□ -0.96
PUM1-220ENST00000529846 TOPBP1Q92547 1522 aa9.03□□□□□ -0.96
PUM1-220ENST00000529846 WRNQ14191 1432 aaPredicted RBP eCLIP9.03□□□□□ -0.96
PUM1-220ENST00000529846 IFT140Q96RY7 1462 aa9.02□□□□□ -0.96
PUM1-220ENST00000529846 PIAS4Q8N2W9 510 aaPredicted RBP9.02□□□□□ -0.97
PUM1-220ENST00000529846 SOGA1O94964 1423 aa8.98□□□□□ -0.97
PUM1-220ENST00000529846 WDR97A6NE52 1622 aa8.98□□□□□ -0.97
PUM1-220ENST00000529846 TOP2BQ02880 1626 aa8.97□□□□□ -0.97
PUM1-220ENST00000529846 CUX1P39880 1505 aa8.96□□□□□ -0.97
PUM1-220ENST00000529846 POLA1P09884 1462 aaPredicted RBP8.96□□□□□ -0.98
PUM1-220ENST00000529846 TRIM41Q8WV44 630 aa8.94□□□□□ -0.98
PUM1-220ENST00000529846 FGD5Q6ZNL6 1462 aa8.94□□□□□ -0.98
PUM1-220ENST00000529846 BIVM-ERCC5R4GMW8 1640 aa8.94□□□□□ -0.98
PUM1-220ENST00000529846 ABCA10Q8WWZ4 1543 aa8.92□□□□□ -0.98
PUM1-220ENST00000529846 TARBP1Q13395 1621 aaKnown RBP8.89□□□□□ -0.99
PUM1-220ENST00000529846 SYNJ1O43426 1573 aa8.88□□□□□ -0.99
PUM1-220ENST00000529846 KIF27Q86VH2 1401 aa8.88□□□□□ -0.99
PUM1-220ENST00000529846 GRIN2BQ13224 1484 aa8.87□□□□□ -0.99
PUM1-220ENST00000529846 RAD54L2Q9Y4B4 1467 aa8.87□□□□□ -0.99
PUM1-220ENST00000529846 TDRD9Q8NDG6 1382 aaKnown RBP8.86□□□□□ -0.99
PUM1-220ENST00000529846 GAPVD1Q14C86 1478 aa8.86□□□□□ -0.99
PUM1-220ENST00000529846 EEA1Q15075 1411 aa8.85□□□□□ -0.99
PUM1-220ENST00000529846 AQRO60306 1485 aaKnown RBP eCLIP8.84□□□□□ -0.991e-7■■■■■ 27.9
PUM1-220ENST00000529846 MAGI1Q96QZ7 1491 aaPredicted RBP8.84□□□□□ -0.99
PUM1-220ENST00000529846 ERICH3Q5RHP9 1530 aa8.84□□□□□ -0.99
PUM1-220ENST00000529846 ZNF608Q9ULD9 1512 aaPredicted RBP8.84□□□□□ -0.99
PUM1-220ENST00000529846 OSCARQ8IYS5 282 aa8.83□□□□□ -1
PUM1-220ENST00000529846 KCNA4P22459 653 aa8.82□□□□□ -1
PUM1-220ENST00000529846 CHMP7Q8WUX9 453 aaPredicted RBP8.82□□□□□ -1
PUM1-220ENST00000529846 EIF4G3O43432 1585 aaKnown RBP8.82□□□□□ -1
PUM1-220ENST00000529846 FHAD1B1AJZ9 1412 aa8.8□□□□□ -1
PUM1-220ENST00000529846 ABCA5Q8WWZ7 1642 aa8.8□□□□□ -1
PUM1-220ENST00000529846 IGF1RP08069 1367 aa8.8□□□□□ -1
PUM1-220ENST00000529846 SYNJ2O15056 1496 aa8.8□□□□□ -1
PUM1-220ENST00000529846 CSRNP3Q8WYN3 585 aa8.77□□□□□ -1.01
PUM1-220ENST00000529846 SNAPC4Q5SXM2 1469 aa8.77□□□□□ -1.01
PUM1-220ENST00000529846 FBLN2P98095 1184 aa8.76□□□□□ -1.01
PUM1-220ENST00000529846 CARMIL1Q5VZK9 1371 aa8.75□□□□□ -1.01
PUM1-220ENST00000529846 PPP4R3CPQ6ZMV5 832 aa8.75□□□□□ -1.01
PUM1-220ENST00000529846 CUL7Q14999 1698 aa8.75□□□□□ -1.01
PUM1-220ENST00000529846 DNAJC5Q9H3Z4 198 aa8.74□□□□□ -1.01
PUM1-220ENST00000529846 PBRM1Q86U86 1689 aa8.72□□□□□ -1.01
PUM1-220ENST00000529846 GRIN2AQ12879 1464 aa8.71□□□□□ -1.01
PUM1-220ENST00000529846 RAPGEF2Q9Y4G8 1499 aa8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms