Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
APOA4P06727 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
APOA4P06727 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
APOA4P06727 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
APOA4P06727 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
APOA4P06727 DYNC1I2-204ENST00000409317 2196 ntTSL 5 BASIC13.79□□□□□ -0.2
APOA4P06727 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
APOA4P06727 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC13.79□□□□□ -0.2
APOA4P06727 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
APOA4P06727 SLC37A4-202ENST00000357590 2356 ntTSL 5 BASIC13.79□□□□□ -0.2
APOA4P06727 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
APOA4P06727 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
APOA4P06727 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
APOA4P06727 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
APOA4P06727 MAGED4-201ENST00000375626 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
APOA4P06727 MYNN-201ENST00000349841 4999 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
APOA4P06727 RBM4-201ENST00000310092 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
APOA4P06727 ANXA11-201ENST00000265447 2526 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
APOA4P06727 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
APOA4P06727 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC13.78□□□□□ -0.2
APOA4P06727 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
APOA4P06727 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOA4P06727 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC13.78□□□□□ -0.2
APOA4P06727 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC13.78□□□□□ -0.2
APOA4P06727 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOA4P06727 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
APOA4P06727 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC13.78□□□□□ -0.2
APOA4P06727 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
APOA4P06727 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOA4P06727 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
APOA4P06727 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOA4P06727 LINC01756-201ENST00000417651 2148 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
APOA4P06727 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOA4P06727 ZNF573-204ENST00000392138 2266 ntTSL 2 BASIC13.78□□□□□ -0.2
APOA4P06727 MAT2B-204ENST00000518095 3409 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
APOA4P06727 BRD1-201ENST00000216267 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOA4P06727 DDX50-201ENST00000373585 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOA4P06727 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOA4P06727 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOA4P06727 SAT1-201ENST00000379251 801 ntTSL 2 BASIC13.78□□□□□ -0.2
APOA4P06727 SAT1-202ENST00000379253 909 ntTSL 2 BASIC13.78□□□□□ -0.2
APOA4P06727 SAT1-203ENST00000379254 868 ntTSL 3 BASIC13.78□□□□□ -0.2
APOA4P06727 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOA4P06727 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
APOA4P06727 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOA4P06727 LINC00265-2P-201ENST00000413372 782 ntBASIC13.78□□□□□ -0.2
APOA4P06727 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC13.78□□□□□ -0.2
APOA4P06727 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC13.78□□□□□ -0.2
APOA4P06727 PPP1R2P4-201ENST00000424051 595 ntBASIC13.78□□□□□ -0.2
APOA4P06727 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC13.78□□□□□ -0.2
APOA4P06727 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC13.78□□□□□ -0.2
APOA4P06727 RN7SL67P-201ENST00000492147 296 ntBASIC13.78□□□□□ -0.2
APOA4P06727 C14orf132-201ENST00000553764 562 ntTSL 4 BASIC13.78□□□□□ -0.2
APOA4P06727 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC13.78□□□□□ -0.2
APOA4P06727 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC13.78□□□□□ -0.2
APOA4P06727 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC13.78□□□□□ -0.2
APOA4P06727 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
APOA4P06727 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC13.78□□□□□ -0.2
APOA4P06727 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOA4P06727 TBC1D3J-201ENST00000620719 1426 ntBASIC13.78□□□□□ -0.2
APOA4P06727 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOA4P06727 Z83844.1-201ENST00000455236 4904 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
APOA4P06727 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC13.78□□□□□ -0.2
APOA4P06727 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOA4P06727 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOA4P06727 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC13.78□□□□□ -0.2
APOA4P06727 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOA4P06727 SARS-202ENST00000369923 1882 ntTSL 5 BASIC13.78□□□□□ -0.2
APOA4P06727 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
APOA4P06727 POLG-202ENST00000442287 4487 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOA4P06727 AL805961.2-201ENST00000642139 4817 ntBASIC13.78□□□□□ -0.2
APOA4P06727 LINC01623-201ENST00000440244 2458 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
APOA4P06727 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
APOA4P06727 AC020763.3-201ENST00000625095 2904 ntBASIC13.77□□□□□ -0.2
APOA4P06727 PCDHB19P-202ENST00000625133 2914 ntBASIC13.77□□□□□ -0.2
APOA4P06727 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC13.77□□□□□ -0.2
APOA4P06727 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC13.77□□□□□ -0.2
APOA4P06727 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
APOA4P06727 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.2
APOA4P06727 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
APOA4P06727 CYB5RL-201ENST00000287899 5777 ntTSL 3 BASIC13.77□□□□□ -0.2
APOA4P06727 GAPDHS-201ENST00000222286 1489 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
APOA4P06727 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
APOA4P06727 SNRNP27-201ENST00000244227 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
APOA4P06727 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
APOA4P06727 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
APOA4P06727 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
APOA4P06727 SH3BGRL3-202ENST00000319041 768 ntTSL 2 BASIC13.77□□□□□ -0.21
APOA4P06727 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
APOA4P06727 FOXN4-202ENST00000355216 2958 ntTSL 2 BASIC13.77□□□□□ -0.21
APOA4P06727 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
APOA4P06727 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
APOA4P06727 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
APOA4P06727 LYRM9-202ENST00000379103 1685 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
APOA4P06727 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
APOA4P06727 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
APOA4P06727 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC13.77□□□□□ -0.21
APOA4P06727 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC13.77□□□□□ -0.21
APOA4P06727 NME6-203ENST00000415644 849 ntTSL 2 BASIC13.77□□□□□ -0.21
APOA4P06727 AC007274.2-201ENST00000421675 662 ntBASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms