Protein–RNA interactions for Protein: Q9UNL2

SSR3, Translocon-associated protein subunit gamma, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3Q9UNL2 COL22A1-203ENST00000435777 4355 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
SSR3Q9UNL2 HPSE2-201ENST00000370546 1849 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
SSR3Q9UNL2 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC12.27□□□□□ -0.44
SSR3Q9UNL2 GRIPAP1-207ENST00000593475 2908 ntTSL 5 BASIC12.27□□□□□ -0.44
SSR3Q9UNL2 MZF1-AS1-202ENST00000600534 2567 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
SSR3Q9UNL2 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC12.27□□□□□ -0.44
SSR3Q9UNL2 WDR60-202ENST00000407559 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SSR3Q9UNL2 PPCDC-201ENST00000342932 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SSR3Q9UNL2 GREM2-201ENST00000318160 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SSR3Q9UNL2 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
SSR3Q9UNL2 PDXK-201ENST00000291565 7366 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SSR3Q9UNL2 SEC31A-202ENST00000311785 3909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
SSR3Q9UNL2 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC12.27□□□□□ -0.44
SSR3Q9UNL2 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC12.27□□□□□ -0.44
SSR3Q9UNL2 TP73-206ENST00000378288 5120 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
SSR3Q9UNL2 TTC4-201ENST00000371281 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SSR3Q9UNL2 VDR-202ENST00000395324 4762 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
SSR3Q9UNL2 MAML3-203ENST00000509479 6844 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SSR3Q9UNL2 SPRED2-201ENST00000356388 4097 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SSR3Q9UNL2 TBC1D3P2-203ENST00000581291 2088 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SSR3Q9UNL2 SCARA5-202ENST00000380385 2934 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SSR3Q9UNL2 MAX-212ENST00000555932 1673 ntTSL 5 BASIC12.27□□□□□ -0.45
SSR3Q9UNL2 TBL1X-206ENST00000424279 5451 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
SSR3Q9UNL2 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SSR3Q9UNL2 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
SSR3Q9UNL2 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SSR3Q9UNL2 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SSR3Q9UNL2 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC12.27□□□□□ -0.45
SSR3Q9UNL2 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC12.27□□□□□ -0.45
SSR3Q9UNL2 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC12.27□□□□□ -0.45
SSR3Q9UNL2 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC12.27□□□□□ -0.45
SSR3Q9UNL2 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC12.27□□□□□ -0.45
SSR3Q9UNL2 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC12.27□□□□□ -0.45
SSR3Q9UNL2 DUX4L27-201ENST00000554796 1261 ntBASIC12.27□□□□□ -0.45
SSR3Q9UNL2 RN7SL713P-201ENST00000582127 302 ntBASIC12.27□□□□□ -0.45
SSR3Q9UNL2 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SSR3Q9UNL2 AL671883.3-201ENST00000603274 991 ntBASIC12.27□□□□□ -0.45
SSR3Q9UNL2 ZNF529-209ENST00000591340 4331 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SSR3Q9UNL2 IGHG1-202ENST00000390548 2619 ntAPPRIS P5 BASIC12.27□□□□□ -0.45
SSR3Q9UNL2 MADD-201ENST00000311027 5990 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
SSR3Q9UNL2 MGAT4EP-201ENST00000330493 2810 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SSR3Q9UNL2 CIZ1-205ENST00000372948 2858 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
SSR3Q9UNL2 ATL2-201ENST00000378954 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SSR3Q9UNL2 KDM2B-219ENST00000611216 3434 ntTSL 5 BASIC12.27□□□□□ -0.45
SSR3Q9UNL2 AF013593.1-201ENST00000458074 1487 ntBASIC12.27□□□□□ -0.45
SSR3Q9UNL2 AL356130.1-201ENST00000620188 1965 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SSR3Q9UNL2 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SSR3Q9UNL2 IFT122-204ENST00000349441 3569 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SSR3Q9UNL2 DAXX-202ENST00000374542 2613 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
SSR3Q9UNL2 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
SSR3Q9UNL2 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC12.26□□□□□ -0.45
SSR3Q9UNL2 SEC23B-201ENST00000262544 3176 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
SSR3Q9UNL2 GRK7-201ENST00000264952 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SSR3Q9UNL2 KCNH1-209ENST00000639952 8075 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SSR3Q9UNL2 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC12.26□□□□□ -0.45
SSR3Q9UNL2 LAMA4-207ENST00000424408 5983 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
SSR3Q9UNL2 ADAM32-206ENST00000519315 2168 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SSR3Q9UNL2 RBM33-203ENST00000341148 7058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
SSR3Q9UNL2 IQUB-202ENST00000466202 3296 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SSR3Q9UNL2 SGSM1-201ENST00000400358 6643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
SSR3Q9UNL2 DIP2C-205ENST00000634311 4961 ntTSL 5 BASIC12.26□□□□□ -0.45
SSR3Q9UNL2 AC092139.4-201ENST00000624318 2794 ntBASIC12.26□□□□□ -0.45
SSR3Q9UNL2 AC009549.1-201ENST00000603468 1686 ntBASIC12.26□□□□□ -0.45
SSR3Q9UNL2 SELPLG-203ENST00000550948 2256 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
SSR3Q9UNL2 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SSR3Q9UNL2 NOL4L-203ENST00000359676 5991 ntTSL 2 BASIC12.26□□□□□ -0.45
SSR3Q9UNL2 UBTF-206ENST00000527034 3010 ntTSL 5 BASIC12.26□□□□□ -0.45
SSR3Q9UNL2 TG-201ENST00000220616 8450 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SSR3Q9UNL2 AC026992.2-203ENST00000563004 2419 ntBASIC12.26□□□□□ -0.45
SSR3Q9UNL2 AP002008.2-201ENST00000635926 4870 ntBASIC12.26□□□□□ -0.45
SSR3Q9UNL2 API5-208ENST00000531273 1868 ntTSL 2 BASIC12.26□□□□□ -0.45
SSR3Q9UNL2 CC2D1A-208ENST00000589606 3117 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SSR3Q9UNL2 OCA2-202ENST00000354638 3186 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
SSR3Q9UNL2 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SSR3Q9UNL2 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SSR3Q9UNL2 GUK1-206ENST00000366723 845 ntTSL 5 BASIC12.26□□□□□ -0.45
SSR3Q9UNL2 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
SSR3Q9UNL2 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC12.26□□□□□ -0.45
SSR3Q9UNL2 AK6-201ENST00000380818 1183 ntTSL 2 BASIC12.26□□□□□ -0.45
SSR3Q9UNL2 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SSR3Q9UNL2 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC12.26□□□□□ -0.45
SSR3Q9UNL2 AC055876.3-201ENST00000431496 288 ntBASIC12.26□□□□□ -0.45
SSR3Q9UNL2 DFFBP1-201ENST00000433250 979 ntBASIC12.26□□□□□ -0.45
SSR3Q9UNL2 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC12.26□□□□□ -0.45
SSR3Q9UNL2 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC12.26□□□□□ -0.45
SSR3Q9UNL2 AC093214.1-201ENST00000511688 1107 ntBASIC12.26□□□□□ -0.45
SSR3Q9UNL2 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC12.26□□□□□ -0.45
SSR3Q9UNL2 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC12.26□□□□□ -0.45
SSR3Q9UNL2 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC12.26□□□□□ -0.45
SSR3Q9UNL2 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC12.26□□□□□ -0.45
SSR3Q9UNL2 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC12.26□□□□□ -0.45
SSR3Q9UNL2 AC132192.2-201ENST00000596206 1147 ntBASIC12.26□□□□□ -0.45
SSR3Q9UNL2 AC138649.4-201ENST00000612222 287 ntBASIC12.26□□□□□ -0.45
SSR3Q9UNL2 VAMP1-201ENST00000361716 3449 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SSR3Q9UNL2 ECM1-202ENST00000369047 2070 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
SSR3Q9UNL2 F2RL3-201ENST00000248076 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SSR3Q9UNL2 AQP2-201ENST00000199280 4174 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SSR3Q9UNL2 FAM225B-201ENST00000423546 5629 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SSR3Q9UNL2 TRMT1-202ENST00000357720 2142 ntAPPRIS P3 TSL 2 BASIC12.26□□□□□ -0.45
SSR3Q9UNL2 FAM105A-201ENST00000274217 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms