Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 LIPG-205ENST00000580036 1453 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
SVIPQ8NHG7 TRIM42-201ENST00000286349 2539 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
SVIPQ8NHG7 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
SVIPQ8NHG7 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
SVIPQ8NHG7 MGAM2-203ENST00000550469 1591 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
SVIPQ8NHG7 SALL2-206ENST00000613414 1566 ntTSL 2 BASIC8.04□□□□□ -1.12
SVIPQ8NHG7 CORO1C-201ENST00000261401 3892 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
SVIPQ8NHG7 FARS2-201ENST00000274680 1663 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
SVIPQ8NHG7 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC8.04□□□□□ -1.12
SVIPQ8NHG7 CD164-203ENST00000324953 2936 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
SVIPQ8NHG7 SMARCA2-202ENST00000324954 1781 ntTSL 5 BASIC8.04□□□□□ -1.12
SVIPQ8NHG7 NTPCR-201ENST00000366627 1762 ntTSL 3 BASIC8.04□□□□□ -1.12
SVIPQ8NHG7 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC8.04□□□□□ -1.12
SVIPQ8NHG7 POLR2M-201ENST00000299638 4199 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
SVIPQ8NHG7 CS-202ENST00000542324 1893 ntAPPRIS ALT2 TSL 2 BASIC8.04□□□□□ -1.12
SVIPQ8NHG7 FAM120B-203ENST00000537664 3212 ntAPPRIS ALT2 TSL 2 BASIC8.04□□□□□ -1.12
SVIPQ8NHG7 AL356273.3-201ENST00000623474 1989 ntBASIC8.04□□□□□ -1.12
SVIPQ8NHG7 XRRA1-201ENST00000321448 4695 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
SVIPQ8NHG7 FAHD2A-201ENST00000233379 4757 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
SVIPQ8NHG7 AC118344.2-201ENST00000622968 4765 ntBASIC8.04□□□□□ -1.12
SVIPQ8NHG7 FGD3-203ENST00000416701 3432 ntAPPRIS ALT2 TSL 2 BASIC8.04□□□□□ -1.12
SVIPQ8NHG7 LINC01616-201ENST00000561816 2280 ntBASIC8.04□□□□□ -1.12
SVIPQ8NHG7 ALDH3A2-202ENST00000339618 3828 ntAPPRIS ALT1 TSL 1 (best) BASIC8.04□□□□□ -1.12
SVIPQ8NHG7 ZSCAN20-201ENST00000361328 4316 ntAPPRIS P1 TSL 2 BASIC8.04□□□□□ -1.12
SVIPQ8NHG7 CLIC4-201ENST00000374379 4346 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
SVIPQ8NHG7 POTEKP-201ENST00000397487 2688 ntBASIC8.04□□□□□ -1.12
SVIPQ8NHG7 FXR1-203ENST00000445140 2651 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
SVIPQ8NHG7 LINC01761-201ENST00000424943 2755 ntTSL 2 BASIC8.04□□□□□ -1.12
SVIPQ8NHG7 KIF13A-213ENST00000636847 5538 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
SVIPQ8NHG7 ACBD7-201ENST00000356189 1322 ntAPPRIS P1 TSL 2 BASIC8.03□□□□□ -1.12
SVIPQ8NHG7 CSF2RB-201ENST00000262825 4087 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
SVIPQ8NHG7 AC100757.3-201ENST00000622361 1406 ntBASIC8.03□□□□□ -1.12
SVIPQ8NHG7 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC8.03□□□□□ -1.12
SVIPQ8NHG7 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC8.03□□□□□ -1.12
SVIPQ8NHG7 PAAF1-215ENST00000544909 1802 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
SVIPQ8NHG7 ARHGAP5-AS1-201ENST00000553596 1848 ntBASIC8.03□□□□□ -1.12
SVIPQ8NHG7 NICN1-208ENST00000615713 1921 ntAPPRIS P1 TSL 2 BASIC8.03□□□□□ -1.12
SVIPQ8NHG7 SLC11A2-212ENST00000547688 2401 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
SVIPQ8NHG7 GRIK1-202ENST00000389124 2712 ntTSL 5 BASIC8.03□□□□□ -1.12
SVIPQ8NHG7 WASF1-204ENST00000392586 2815 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
SVIPQ8NHG7 AC007938.1-201ENST00000562524 2902 ntBASIC8.03□□□□□ -1.12
SVIPQ8NHG7 GZF1-201ENST00000338121 4835 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
SVIPQ8NHG7 PPP6C-202ENST00000415905 4172 ntTSL 2 BASIC8.03□□□□□ -1.12
SVIPQ8NHG7 ARMC4-201ENST00000305242 3572 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
SVIPQ8NHG7 STAT1-204ENST00000409465 3097 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
SVIPQ8NHG7 SORBS1-209ENST00000371245 2779 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
SVIPQ8NHG7 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC8.03□□□□□ -1.12
SVIPQ8NHG7 TAS1R1-202ENST00000351136 1871 ntTSL 2 BASIC8.03□□□□□ -1.12
SVIPQ8NHG7 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
SVIPQ8NHG7 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
SVIPQ8NHG7 AP003038.1-201ENST00000527289 1754 ntBASIC8.03□□□□□ -1.12
SVIPQ8NHG7 AC009102.1-201ENST00000564074 1777 ntTSL 2 BASIC8.03□□□□□ -1.12
SVIPQ8NHG7 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
SVIPQ8NHG7 LEXM-202ENST00000371273 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
SVIPQ8NHG7 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
SVIPQ8NHG7 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC8.03□□□□□ -1.12
SVIPQ8NHG7 SCN8A-203ENST00000545061 11433 ntTSL 5 BASIC8.03□□□□□ -1.12
SVIPQ8NHG7 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
SVIPQ8NHG7 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC8.03□□□□□ -1.12
SVIPQ8NHG7 GABPB1-206ENST00000543881 1450 ntTSL 2 BASIC8.03□□□□□ -1.12
SVIPQ8NHG7 AC011195.2-201ENST00000583666 1486 ntAPPRIS P1 TSL 3 BASIC8.03□□□□□ -1.12
SVIPQ8NHG7 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
SVIPQ8NHG7 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
SVIPQ8NHG7 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC8.03□□□□□ -1.12
SVIPQ8NHG7 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
SVIPQ8NHG7 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC8.03□□□□□ -1.12
SVIPQ8NHG7 AC022431.2-201ENST00000431789 536 ntTSL 4 BASIC8.03□□□□□ -1.12
SVIPQ8NHG7 FAAHP1-202ENST00000446499 1238 ntBASIC8.03□□□□□ -1.12
SVIPQ8NHG7 BX284668.4-201ENST00000453917 508 ntBASIC8.03□□□□□ -1.12
SVIPQ8NHG7 SCDP1-201ENST00000455244 1081 ntBASIC8.03□□□□□ -1.12
SVIPQ8NHG7 TPT1P11-201ENST00000458482 498 ntBASIC8.03□□□□□ -1.12
SVIPQ8NHG7 AC090589.1-201ENST00000473109 362 ntBASIC8.03□□□□□ -1.12
SVIPQ8NHG7 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC8.03□□□□□ -1.12
SVIPQ8NHG7 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
SVIPQ8NHG7 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC8.03□□□□□ -1.12
SVIPQ8NHG7 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC8.03□□□□□ -1.12
SVIPQ8NHG7 AL583810.1-201ENST00000553344 1045 ntBASIC8.03□□□□□ -1.12
SVIPQ8NHG7 SNHG16-201ENST00000448136 3607 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
SVIPQ8NHG7 SLC39A6-201ENST00000269187 3543 ntAPPRIS P3 TSL 2 BASIC8.03□□□□□ -1.12
SVIPQ8NHG7 OPTN-205ENST00000378757 3321 ntAPPRIS P2 TSL 1 (best) BASIC8.03□□□□□ -1.12
SVIPQ8NHG7 ACAP2-215ENST00000618471 3207 ntTSL 5 BASIC8.03□□□□□ -1.12
SVIPQ8NHG7 LINC02288-201ENST00000500215 2924 ntTSL 2 BASIC8.03□□□□□ -1.12
SVIPQ8NHG7 TIMM10B-201ENST00000254616 2840 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
SVIPQ8NHG7 AP000446.1-201ENST00000530045 2643 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
SVIPQ8NHG7 GP1BA-201ENST00000329125 2501 ntAPPRIS P2 TSL 1 (best) BASIC8.03□□□□□ -1.12
SVIPQ8NHG7 AC006600.2-201ENST00000624834 2506 ntBASIC8.03□□□□□ -1.12
SVIPQ8NHG7 APBB2-201ENST00000295974 8972 ntAPPRIS ALT1 TSL 2 BASIC8.03□□□□□ -1.12
SVIPQ8NHG7 EGFR-201ENST00000275493 9821 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
SVIPQ8NHG7 CCL14-201ENST00000614009 3265 ntTSL 2 BASIC8.03□□□□□ -1.12
SVIPQ8NHG7 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC8.03□□□□□ -1.12
SVIPQ8NHG7 GOLGA6A-201ENST00000290438 3176 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
SVIPQ8NHG7 BTN2A3P-201ENST00000377662 1836 ntBASIC8.03□□□□□ -1.12
SVIPQ8NHG7 KCTD7-209ENST00000640385 4118 ntTSL 5 BASIC8.03□□□□□ -1.12
SVIPQ8NHG7 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
SVIPQ8NHG7 RFFL-205ENST00000415395 1706 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
SVIPQ8NHG7 AL121936.1-201ENST00000641660 2884 ntBASIC8.03□□□□□ -1.12
SVIPQ8NHG7 LINC00963-202ENST00000419300 9557 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
SVIPQ8NHG7 MIER1-203ENST00000357692 4978 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
SVIPQ8NHG7 AL133230.1-201ENST00000431019 4587 ntTSL 2 BASIC8.03□□□□□ -1.12
SVIPQ8NHG7 CBFA2T2-210ENST00000543126 3502 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms