RNA–Protein interactions for RNA: ENST00000389124.6

GRIK1-202, Transcript of glutamate ionotropic receptor kainate type subunit 1, humanhuman

TSL 5 BASIC

Gene GRIK1, Length 2,712 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1-202ENST00000389124 NISCHQ9Y2I1 1504 aa16.33■□□□□ 0.21
GRIK1-202ENST00000389124 CCDC180Q9P1Z9 1646 aa14.28□□□□□ -0.12
GRIK1-202ENST00000389124 SLC24A1O60721 1099 aa13.73□□□□□ -0.21
GRIK1-202ENST00000389124 ZCCHC6Q5VYS8 1495 aaKnown RBP13.7□□□□□ -0.22
GRIK1-202ENST00000389124 ABCC9O60706 1549 aa13.65□□□□□ -0.22
GRIK1-202ENST00000389124 DCAF8L2P0C7V8 631 aa13.59□□□□□ -0.23
GRIK1-202ENST00000389124 DCAF1Q9Y4B6 1507 aa13.45□□□□□ -0.26
GRIK1-202ENST00000389124 SHROOM4Q9ULL8 1493 aa13.34□□□□□ -0.27
GRIK1-202ENST00000389124 MYO15BQ96JP2 1530 aa13.32□□□□□ -0.28
GRIK1-202ENST00000389124 NACADO15069 1562 aa13.31□□□□□ -0.28
GRIK1-202ENST00000389124 RB1CC1Q8TDY2 1594 aa13.23□□□□□ -0.29
GRIK1-202ENST00000389124 SCRIBQ14160 1630 aa13.19□□□□□ -0.3
GRIK1-202ENST00000389124 UNC13AQ9UPW8 1703 aa13.06□□□□□ -0.32
GRIK1-202ENST00000389124 CHIC1Q5VXU3 224 aa12.9□□□□□ -0.34
GRIK1-202ENST00000389124 BICRAQ9NZM4 1560 aa12.87□□□□□ -0.35
GRIK1-202ENST00000389124 PABPN1Q86U42 306 aaKnown RBP eCLIP12.86□□□□□ -0.35
GRIK1-202ENST00000389124 EHMT2Q96KQ7 1210 aa12.8□□□□□ -0.36
GRIK1-202ENST00000389124 SUPT5HO00267 1087 aaKnown RBP12.76□□□□□ -0.37
GRIK1-202ENST00000389124 CECR2Q9BXF3 1484 aa12.74□□□□□ -0.37
GRIK1-202ENST00000389124 MROH2BQ7Z745 1585 aa12.64□□□□□ -0.39
GRIK1-202ENST00000389124 RSF1Q96T23 1441 aaPredicted RBP12.64□□□□□ -0.39
GRIK1-202ENST00000389124 BAZ1AQ9NRL2 1556 aaPredicted RBP12.61□□□□□ -0.39
GRIK1-202ENST00000389124 SMARCA4P51532 1647 aa12.6□□□□□ -0.39
GRIK1-202ENST00000389124 PLPPR3Q6T4P5 718 aa12.6□□□□□ -0.39
GRIK1-202ENST00000389124 WIZO95785 1651 aa12.57□□□□□ -0.4
GRIK1-202ENST00000389124 EIF4G1Q04637 1599 aaKnown RBP12.49□□□□□ -0.41
GRIK1-202ENST00000389124 RTN4Q9NQC3 1192 aaKnown RBP12.42□□□□□ -0.42
GRIK1-202ENST00000389124 PEG3Q9GZU2 1588 aa12.41□□□□□ -0.42
GRIK1-202ENST00000389124 ATAD2BQ9ULI0 1458 aa12.39□□□□□ -0.43
GRIK1-202ENST00000389124 DAXXQ9UER7 740 aaPredicted RBP12.38□□□□□ -0.43
GRIK1-202ENST00000389124 SMARCA2P51531 1590 aa12.37□□□□□ -0.43
GRIK1-202ENST00000389124 TOP2AP11388 1531 aaKnown RBP12.37□□□□□ -0.43
GRIK1-202ENST00000389124 CC2D2AQ9P2K1 1620 aa12.34□□□□□ -0.43
GRIK1-202ENST00000389124 BAZ1BQ9UIG0 1483 aaKnown RBP12.33□□□□□ -0.44
GRIK1-202ENST00000389124 NCAPD3P42695 1498 aa12.28□□□□□ -0.44
GRIK1-202ENST00000389124 HMGXB3Q12766 1538 aa12.26□□□□□ -0.45
GRIK1-202ENST00000389124 CCDC88BA6NC98 1476 aa12.26□□□□□ -0.45
GRIK1-202ENST00000389124 PELP1Q8IZL8 1130 aaKnown RBP12.25□□□□□ -0.45
GRIK1-202ENST00000389124 NCBP3Q53F19 620 aaKnown RBP12.19□□□□□ -0.46
GRIK1-202ENST00000389124 MYT1Q01538 1121 aa12.15□□□□□ -0.46
GRIK1-202ENST00000389124 DNAJC5BQ9UF47 199 aa12.13□□□□□ -0.47
GRIK1-202ENST00000389124 AEBP2Q6ZN18 517 aaPredicted RBP12.11□□□□□ -0.47
GRIK1-202ENST00000389124 ABCC8Q09428 1581 aa12.03□□□□□ -0.48
GRIK1-202ENST00000389124 PRKCSHP14314 528 aaPredicted RBP12□□□□□ -0.49
GRIK1-202ENST00000389124 CFTRP13569 1480 aa12□□□□□ -0.49
GRIK1-202ENST00000389124 KCNA4P22459 653 aa11.99□□□□□ -0.49
GRIK1-202ENST00000389124 PRDM2Q13029 1718 aa11.98□□□□□ -0.49
GRIK1-202ENST00000389124 TRIM41Q8WV44 630 aa11.97□□□□□ -0.49
GRIK1-202ENST00000389124 CADPSQ9ULU8 1353 aa11.97□□□□□ -0.49
GRIK1-202ENST00000389124 NESP48681 1621 aa11.96□□□□□ -0.49
GRIK1-202ENST00000389124 AMER1Q5JTC6 1135 aaPredicted RBP11.93□□□□□ -0.5
GRIK1-202ENST00000389124 WRNQ14191 1432 aaPredicted RBP eCLIP11.9□□□□□ -0.5
GRIK1-202ENST00000389124 LAMC3Q9Y6N6 1575 aa11.9□□□□□ -0.5
GRIK1-202ENST00000389124 SYNJ1O43426 1573 aa11.89□□□□□ -0.51
GRIK1-202ENST00000389124 CSRNP3Q8WYN3 585 aa11.88□□□□□ -0.51
GRIK1-202ENST00000389124 FANCD2Q9BXW9 1451 aa11.86□□□□□ -0.51
GRIK1-202ENST00000389124 KIF21AQ7Z4S6 1674 aa11.84□□□□□ -0.51
GRIK1-202ENST00000389124 CUX1P39880 1505 aa11.83□□□□□ -0.52
GRIK1-202ENST00000389124 APLP2Q06481 763 aa11.82□□□□□ -0.52
GRIK1-202ENST00000389124 TOP2BQ02880 1626 aa11.82□□□□□ -0.52
GRIK1-202ENST00000389124 BIVM-ERCC5R4GMW8 1640 aa11.81□□□□□ -0.52
GRIK1-202ENST00000389124 PHF23Q9BUL5 403 aaPredicted RBP11.8□□□□□ -0.52
GRIK1-202ENST00000389124 FAM9AQ8IZU1 332 aaPredicted RBP11.8□□□□□ -0.52
GRIK1-202ENST00000389124 CEP164Q9UPV0 1460 aa11.79□□□□□ -0.52
GRIK1-202ENST00000389124 PDS5BQ9NTI5 1447 aa11.79□□□□□ -0.52
GRIK1-202ENST00000389124 TTBK1Q5TCY1 1321 aaPredicted RBP11.77□□□□□ -0.52
GRIK1-202ENST00000389124 SOGA1O94964 1423 aa11.75□□□□□ -0.53
GRIK1-202ENST00000389124 DNMBPQ6XZF7 1577 aa11.73□□□□□ -0.53
GRIK1-202ENST00000389124 URB2Q14146 1524 aaKnown RBP11.73□□□□□ -0.53
GRIK1-202ENST00000389124 RUSC2Q8N2Y8 1516 aa11.73□□□□□ -0.53
GRIK1-202ENST00000389124 TIMELESSQ9UNS1 1208 aa11.72□□□□□ -0.53
GRIK1-202ENST00000389124 TOPBP1Q92547 1522 aa11.72□□□□□ -0.53
GRIK1-202ENST00000389124 FGD5Q6ZNL6 1462 aa11.71□□□□□ -0.54
GRIK1-202ENST00000389124 LOC105371045A0A1W2PR82 267 aa11.7□□□□□ -0.54
GRIK1-202ENST00000389124 ERCC6Q03468 1493 aa11.69□□□□□ -0.54
GRIK1-202ENST00000389124 POLA1P09884 1462 aaPredicted RBP11.67□□□□□ -0.54
GRIK1-202ENST00000389124 MRC2Q9UBG0 1479 aa11.66□□□□□ -0.54
GRIK1-202ENST00000389124 RAD54L2Q9Y4B4 1467 aa11.64□□□□□ -0.55
GRIK1-202ENST00000389124 THOC2Q8NI27 1593 aaKnown RBP11.63□□□□□ -0.55
GRIK1-202ENST00000389124 ARXQ96QS3 562 aa11.63□□□□□ -0.55
GRIK1-202ENST00000389124 EEA1Q15075 1411 aa11.62□□□□□ -0.55
GRIK1-202ENST00000389124 WDR62O43379 1518 aa11.61□□□□□ -0.55
GRIK1-202ENST00000389124 CUX2O14529 1486 aa11.61□□□□□ -0.55
GRIK1-202ENST00000389124 WDR97A6NE52 1622 aa11.59□□□□□ -0.55
GRIK1-202ENST00000389124 KIF27Q86VH2 1401 aa11.59□□□□□ -0.55
GRIK1-202ENST00000389124 ABCA10Q8WWZ4 1543 aa11.57□□□□□ -0.56
GRIK1-202ENST00000389124 TARBP1Q13395 1621 aaKnown RBP11.57□□□□□ -0.56
GRIK1-202ENST00000389124 TDRD9Q8NDG6 1382 aaKnown RBP11.53□□□□□ -0.56
GRIK1-202ENST00000389124 ERICH6Q7L0X2 663 aa11.53□□□□□ -0.56
GRIK1-202ENST00000389124 KIF21BO75037 1637 aa11.53□□□□□ -0.56
GRIK1-202ENST00000389124 ABCA5Q8WWZ7 1642 aa11.52□□□□□ -0.57
GRIK1-202ENST00000389124 RAPGEF2Q9Y4G8 1499 aa11.51□□□□□ -0.57
GRIK1-202ENST00000389124 IGF1RP08069 1367 aa11.5□□□□□ -0.57
GRIK1-202ENST00000389124 GOLGA3Q08378 1498 aa11.5□□□□□ -0.57
GRIK1-202ENST00000389124 TULP1O00294 542 aaPredicted RBP11.5□□□□□ -0.57
GRIK1-202ENST00000389124 ZNF608Q9ULD9 1512 aaPredicted RBP11.49□□□□□ -0.57
GRIK1-202ENST00000389124 PRXQ9BXM0 1461 aa11.49□□□□□ -0.57
GRIK1-202ENST00000389124 GAPVD1Q14C86 1478 aa11.49□□□□□ -0.57
GRIK1-202ENST00000389124 IFT140Q96RY7 1462 aa11.49□□□□□ -0.57
GRIK1-202ENST00000389124 AQRO60306 1485 aaKnown RBP eCLIP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms