RNA–Protein interactions for RNA: ENST00000299638.7

POLR2M-201, Transcript of RNA polymerase II subunit M, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene POLR2M, Length 4,199 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2M-201ENST00000299638 NISCHQ9Y2I1 1504 aa21.95■■□□□ 1.1
POLR2M-201ENST00000299638 DCAF8L2P0C7V8 631 aa21.56■■□□□ 1.04
POLR2M-201ENST00000299638 SHROOM4Q9ULL8 1493 aa20.42■□□□□ 0.86
POLR2M-201ENST00000299638 SUPT5HO00267 1087 aaKnown RBP20.27■□□□□ 0.84
POLR2M-201ENST00000299638 EHMT2Q96KQ7 1210 aa19.47■□□□□ 0.71
POLR2M-201ENST00000299638 FAM9AQ8IZU1 332 aaPredicted RBP19.07■□□□□ 0.64
POLR2M-201ENST00000299638 ABCC9O60706 1549 aa19.05■□□□□ 0.64
POLR2M-201ENST00000299638 PABPN1Q86U42 306 aaKnown RBP eCLIP18.78■□□□□ 0.6
POLR2M-201ENST00000299638 RANGAP1P46060 587 aaPredicted RBP18.66■□□□□ 0.58
POLR2M-201ENST00000299638 TRIM41Q8WV44 630 aa18.66■□□□□ 0.58
POLR2M-201ENST00000299638 TTBK1Q5TCY1 1321 aaPredicted RBP18.64■□□□□ 0.57
POLR2M-201ENST00000299638 CHIC1Q5VXU3 224 aa18.3■□□□□ 0.52
POLR2M-201ENST00000299638 PCGF6Q9BYE7 350 aa18.3■□□□□ 0.52
POLR2M-201ENST00000299638 LOC105371045A0A1W2PR82 267 aa18.29■□□□□ 0.52
POLR2M-201ENST00000299638 UBTFP17480 764 aaKnown RBP18.29■□□□□ 0.52
POLR2M-201ENST00000299638 PPARGC1BQ86YN6 1023 aaKnown RBP18.27■□□□□ 0.52
POLR2M-201ENST00000299638 APLP2Q06481 763 aa18.25■□□□□ 0.51
POLR2M-201ENST00000299638 ATP1B4Q9UN42 357 aaPredicted RBP18.2■□□□□ 0.5
POLR2M-201ENST00000299638 ZCCHC6Q5VYS8 1495 aaKnown RBP18.18■□□□□ 0.5
POLR2M-201ENST00000299638 SCRIBQ14160 1630 aa18.07■□□□□ 0.48
POLR2M-201ENST00000299638 CCDC180Q9P1Z9 1646 aa18.03■□□□□ 0.48
POLR2M-201ENST00000299638 CCER1Q8TC90 406 aaPredicted RBP17.69■□□□□ 0.42
POLR2M-201ENST00000299638 ITGAEP38570 1179 aa17.68■□□□□ 0.42
POLR2M-201ENST00000299638 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.64■□□□□ 0.41
POLR2M-201ENST00000299638 HNRNPUL2Q1KMD3 747 aaKnown RBP17.64■□□□□ 0.41
POLR2M-201ENST00000299638 RB1CC1Q8TDY2 1594 aa17.57■□□□□ 0.4
POLR2M-201ENST00000299638 FBLN2P98095 1184 aa17.54■□□□□ 0.4
POLR2M-201ENST00000299638 RSF1Q96T23 1441 aaPredicted RBP17.51■□□□□ 0.39
POLR2M-201ENST00000299638 TRIM26Q12899 539 aaPredicted RBP17.51■□□□□ 0.39
POLR2M-201ENST00000299638 CECR2Q9BXF3 1484 aa17.49■□□□□ 0.39
POLR2M-201ENST00000299638 NACADO15069 1562 aa17.48■□□□□ 0.39
POLR2M-201ENST00000299638 P3H3Q8IVL6 736 aa17.46■□□□□ 0.38
POLR2M-201ENST00000299638 CSRNP3Q8WYN3 585 aa17.42■□□□□ 0.38
POLR2M-201ENST00000299638 ARID3CA6NKF2 412 aa17.4■□□□□ 0.38
POLR2M-201ENST00000299638 MYT1LQ9UL68 1186 aa17.29■□□□□ 0.36
POLR2M-201ENST00000299638 DCAF1Q9Y4B6 1507 aa17.28■□□□□ 0.36
POLR2M-201ENST00000299638 FAM50AQ14320 339 aaKnown RBP17.22■□□□□ 0.35
POLR2M-201ENST00000299638 ZEB1P37275 1124 aaPredicted RBP17.2■□□□□ 0.34
POLR2M-201ENST00000299638 MROH2BQ7Z745 1585 aa17.16■□□□□ 0.34
POLR2M-201ENST00000299638 MYO15BQ96JP2 1530 aa17.14■□□□□ 0.33
POLR2M-201ENST00000299638 HRCP23327 699 aa17.14■□□□□ 0.33
POLR2M-201ENST00000299638 BAZ1BQ9UIG0 1483 aaKnown RBP17.14■□□□□ 0.33
POLR2M-201ENST00000299638 BAZ1AQ9NRL2 1556 aaPredicted RBP17.05■□□□□ 0.32
POLR2M-201ENST00000299638 YTHDC1Q96MU7 727 aaKnown RBP17.03■□□□□ 0.32
POLR2M-201ENST00000299638 CNGB1Q14028 1251 aaPredicted RBP17.03■□□□□ 0.32
POLR2M-201ENST00000299638 POLR3GLQ9BT43 218 aa16.99■□□□□ 0.31
POLR2M-201ENST00000299638 WRNQ14191 1432 aaPredicted RBP eCLIP16.96■□□□□ 0.31
POLR2M-201ENST00000299638 TRIM52Q96A61 297 aa16.95■□□□□ 0.3
POLR2M-201ENST00000299638 NEUROD1Q13562 356 aa16.95■□□□□ 0.3
POLR2M-201ENST00000299638 ZNF777Q9ULD5 760 aaPredicted RBP16.92■□□□□ 0.3
POLR2M-201ENST00000299638 CCDC88BA6NC98 1476 aa16.91■□□□□ 0.3
POLR2M-201ENST00000299638 CHMP7Q8WUX9 453 aaPredicted RBP16.89■□□□□ 0.29
POLR2M-201ENST00000299638 WIZO95785 1651 aa16.88■□□□□ 0.29
POLR2M-201ENST00000299638 SOGA1O94964 1423 aa16.84■□□□□ 0.29
POLR2M-201ENST00000299638 ABCC8Q09428 1581 aa16.81■□□□□ 0.28
POLR2M-201ENST00000299638 ZNF326Q5BKZ1 582 aaKnown RBP16.76■□□□□ 0.27
POLR2M-201ENST00000299638 CHIC2Q9UKJ5 165 aa16.75■□□□□ 0.27
POLR2M-201ENST00000299638 CLIP1P30622 1438 aa16.75■□□□□ 0.27
POLR2M-201ENST00000299638 ATAD2BQ9ULI0 1458 aa16.73■□□□□ 0.27
POLR2M-201ENST00000299638 ERCC6Q03468 1493 aa16.71■□□□□ 0.27
POLR2M-201ENST00000299638 CENPBP07199 599 aaPredicted RBP16.69■□□□□ 0.26
POLR2M-201ENST00000299638 CEP162Q5TB80 1403 aa16.68■□□□□ 0.26
POLR2M-201ENST00000299638 KIF27Q86VH2 1401 aa16.68■□□□□ 0.26
POLR2M-201ENST00000299638 TDRD9Q8NDG6 1382 aaKnown RBP16.67■□□□□ 0.26
POLR2M-201ENST00000299638 CDK11AQ9UQ88 783 aaPredicted RBP16.66■□□□□ 0.26
POLR2M-201ENST00000299638 SMARCA2P51531 1590 aa16.64■□□□□ 0.25
POLR2M-201ENST00000299638 CUX2O14529 1486 aa16.64■□□□□ 0.25
POLR2M-201ENST00000299638 KCNH8Q96L42 1107 aa16.63■□□□□ 0.25
POLR2M-201ENST00000299638 SMARCA4P51532 1647 aa16.61■□□□□ 0.25
POLR2M-201ENST00000299638 DIEXFQ68CQ4 756 aaKnown RBP16.61■□□□□ 0.25
POLR2M-201ENST00000299638 GOLGA3Q08378 1498 aa16.6■□□□□ 0.25
POLR2M-201ENST00000299638 DNAJC5BQ9UF47 199 aa16.6■□□□□ 0.25
POLR2M-201ENST00000299638 CADPSQ9ULU8 1353 aa16.58■□□□□ 0.25
POLR2M-201ENST00000299638 TOP2AP11388 1531 aaKnown RBP16.58■□□□□ 0.24
POLR2M-201ENST00000299638 SLC4A1APQ9BWU0 796 aaKnown RBP16.58■□□□□ 0.24
POLR2M-201ENST00000299638 MTUS2Q5JR59 1369 aa16.57■□□□□ 0.24
POLR2M-201ENST00000299638 CARMIL1Q5VZK9 1371 aa16.56■□□□□ 0.24
POLR2M-201ENST00000299638 EEA1Q15075 1411 aa16.56■□□□□ 0.24
POLR2M-201ENST00000299638 NPM1P06748 294 aaKnown RBP eCLIP16.56■□□□□ 0.24
POLR2M-201ENST00000299638 PLPPR3Q6T4P5 718 aa16.55■□□□□ 0.24
POLR2M-201ENST00000299638 TNIKQ9UKE5 1360 aa16.54■□□□□ 0.24
POLR2M-201ENST00000299638 RUSC2Q8N2Y8 1516 aa16.53■□□□□ 0.24
POLR2M-201ENST00000299638 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.52■□□□□ 0.23
POLR2M-201ENST00000299638 RRP7BPQ9NSQ0 103 aa16.52■□□□□ 0.23
POLR2M-201ENST00000299638 CEP164Q9UPV0 1460 aa16.5■□□□□ 0.23
POLR2M-201ENST00000299638 PDS5BQ9NTI5 1447 aa16.47■□□□□ 0.23
POLR2M-201ENST00000299638 SENP3Q9H4L4 574 aaPredicted RBP16.45■□□□□ 0.22
POLR2M-201ENST00000299638 PLEKHD1A6NEE1 506 aa16.42■□□□□ 0.22
POLR2M-201ENST00000299638 KANK4Q5T7N3 995 aaPredicted RBP16.42■□□□□ 0.22
POLR2M-201ENST00000299638 HIRIP3Q9BW71 556 aaPredicted RBP16.42■□□□□ 0.22
POLR2M-201ENST00000299638 PELP1Q8IZL8 1130 aaKnown RBP16.41■□□□□ 0.22
POLR2M-201ENST00000299638 CHGAP10645 457 aaKnown RBP16.41■□□□□ 0.22
POLR2M-201ENST00000299638 EIF4G1Q04637 1599 aaKnown RBP16.4■□□□□ 0.22
POLR2M-201ENST00000299638 TSPY4P0CV99 314 aa16.39■□□□□ 0.21
POLR2M-201ENST00000299638 TSPY10P0CW01 314 aa16.39■□□□□ 0.21
POLR2M-201ENST00000299638 ZNF316A6NFI3 1004 aaPredicted RBP16.38■□□□□ 0.21
POLR2M-201ENST00000299638 FANCD2Q9BXW9 1451 aa16.35■□□□□ 0.21
POLR2M-201ENST00000299638 BCANQ96GW7 911 aa16.34■□□□□ 0.21
POLR2M-201ENST00000299638 CFDP1Q9UEE9 299 aaPredicted RBP16.34■□□□□ 0.21
POLR2M-201ENST00000299638 NEFLP07196 543 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms