RNA–Protein interactions for RNA: ENST00000561816.1

LINC01616-201, Transcript of long intergenic non-protein coding RNA 1616, humanhuman

BASIC

Gene LINC01616, Length 2,280 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01616-201ENST00000561816 CHIC1Q5VXU3 224 aa19.37■□□□□ 0.69
LINC01616-201ENST00000561816 AEBP2Q6ZN18 517 aaPredicted RBP19.06■□□□□ 0.64
LINC01616-201ENST00000561816 PHF23Q9BUL5 403 aaPredicted RBP17.45■□□□□ 0.38
LINC01616-201ENST00000561816 PLPPR3Q6T4P5 718 aa16.11■□□□□ 0.17
LINC01616-201ENST00000561816 EHMT2Q96KQ7 1210 aa16.05■□□□□ 0.16
LINC01616-201ENST00000561816 KCNA4P22459 653 aa15.65■□□□□ 0.1
LINC01616-201ENST00000561816 ADRA2BP18089 450 aa15.54■□□□□ 0.08
LINC01616-201ENST00000561816 SENP3Q9H4L4 574 aaPredicted RBP15.52■□□□□ 0.08
LINC01616-201ENST00000561816 CSRNP3Q8WYN3 585 aa15.26■□□□□ 0.03
LINC01616-201ENST00000561816 PPP6R1Q9UPN7 881 aa15.12■□□□□ 0.01
LINC01616-201ENST00000561816 SLC24A1O60721 1099 aa14.89□□□□□ -0.03
LINC01616-201ENST00000561816 SLC4A1APQ9BWU0 796 aaKnown RBP14.89□□□□□ -0.03
LINC01616-201ENST00000561816 RTN4Q9NQC3 1192 aaKnown RBP14.62□□□□□ -0.07
LINC01616-201ENST00000561816 FOXD1Q16676 465 aa14.58□□□□□ -0.08
LINC01616-201ENST00000561816 ZBTB22O15209 634 aa14.57□□□□□ -0.08
LINC01616-201ENST00000561816 PPP4R3CPQ6ZMV5 832 aa14.48□□□□□ -0.09
LINC01616-201ENST00000561816 NPM3O75607 178 aaKnown RBP14.31□□□□□ -0.12
LINC01616-201ENST00000561816 AMER1Q5JTC6 1135 aaPredicted RBP14.16□□□□□ -0.14
LINC01616-201ENST00000561816 NCBP3Q53F19 620 aaKnown RBP14.1□□□□□ -0.15
LINC01616-201ENST00000561816 PIAS4Q8N2W9 510 aaPredicted RBP13.95□□□□□ -0.18
LINC01616-201ENST00000561816 FOXD4L1Q9NU39 408 aa13.79□□□□□ -0.2
LINC01616-201ENST00000561816 CNKSR2Q8WXI2 1034 aa13.67□□□□□ -0.22
LINC01616-201ENST00000561816 FKBP8Q14318 412 aa13.65□□□□□ -0.22
LINC01616-201ENST00000561816 NISCHQ9Y2I1 1504 aa13.61□□□□□ -0.23
LINC01616-201ENST00000561816 MAPK8IP2Q13387 824 aaPredicted RBP13.44□□□□□ -0.26
LINC01616-201ENST00000561816 PRKCSHP14314 528 aaPredicted RBP13.43□□□□□ -0.26
LINC01616-201ENST00000561816 SLC4A2P04920 1241 aa13.33□□□□□ -0.28
LINC01616-201ENST00000561816 DNAJC5BQ9UF47 199 aa13.33□□□□□ -0.28
LINC01616-201ENST00000561816 SCAF1Q9H7N4 1312 aaKnown RBP13.21□□□□□ -0.29
LINC01616-201ENST00000561816 PLCB2Q00722 1185 aa13.19□□□□□ -0.3
LINC01616-201ENST00000561816 RNF216Q9NWF9 866 aaPredicted RBP13.13□□□□□ -0.31
LINC01616-201ENST00000561816 HAP1P54257 671 aaPredicted RBP13.03□□□□□ -0.32
LINC01616-201ENST00000561816 TAOK2Q9UL54 1235 aa13.03□□□□□ -0.32
LINC01616-201ENST00000561816 ATF5Q9Y2D1 282 aaPredicted RBP12.99□□□□□ -0.33
LINC01616-201ENST00000561816 ATXN8OSP0DMR3 200 aa12.98□□□□□ -0.33
LINC01616-201ENST00000561816 MYCNP04198 464 aaPredicted RBP12.96□□□□□ -0.33
LINC01616-201ENST00000561816 BCANQ96GW7 911 aa12.91□□□□□ -0.34
LINC01616-201ENST00000561816 TPRNQ4KMQ1 711 aa12.86□□□□□ -0.35
LINC01616-201ENST00000561816 HOXD11P31277 338 aaPredicted RBP12.82□□□□□ -0.36
LINC01616-201ENST00000561816 DCAF8L2P0C7V8 631 aa12.79□□□□□ -0.36
LINC01616-201ENST00000561816 KDM2AQ9Y2K7 1162 aa12.79□□□□□ -0.36
LINC01616-201ENST00000561816 FBLN2P98095 1184 aa12.77□□□□□ -0.37
LINC01616-201ENST00000561816 TIMELESSQ9UNS1 1208 aa12.69□□□□□ -0.38
LINC01616-201ENST00000561816 DMRT2Q9Y5R5 561 aa12.65□□□□□ -0.38
LINC01616-201ENST00000561816 PKD2Q13563 968 aa12.64□□□□□ -0.39
LINC01616-201ENST00000561816 VSIG10Q8N0Z9 540 aa12.64□□□□□ -0.39
LINC01616-201ENST00000561816 IFNLR1Q8IU57 520 aaPredicted RBP12.63□□□□□ -0.39
LINC01616-201ENST00000561816 MSH5O43196 834 aa12.61□□□□□ -0.39
LINC01616-201ENST00000561816 VASPP50552 380 aaPredicted RBP12.55□□□□□ -0.4
LINC01616-201ENST00000561816 TULP1O00294 542 aaPredicted RBP12.53□□□□□ -0.4
LINC01616-201ENST00000561816 NPM1P06748 294 aaKnown RBP eCLIP12.53□□□□□ -0.4
LINC01616-201ENST00000561816 FBXO3Q9UK99 471 aa12.45□□□□□ -0.42
LINC01616-201ENST00000561816 PAXIP1Q6ZW49 1069 aaPredicted RBP12.44□□□□□ -0.42
LINC01616-201ENST00000561816 SPDYE4A6NLX3 237 aa12.43□□□□□ -0.42
LINC01616-201ENST00000561816 CFAP44Q96MT7 982 aa12.42□□□□□ -0.42
LINC01616-201ENST00000561816 TSHZ2Q9NRE2 1034 aa12.39□□□□□ -0.43
LINC01616-201ENST00000561816 MKRN4PQ13434 485 aaPredicted RBP12.38□□□□□ -0.43
LINC01616-201ENST00000561816 PROM2Q8N271 834 aa12.37□□□□□ -0.43
LINC01616-201ENST00000561816 DAXXQ9UER7 740 aaPredicted RBP12.34□□□□□ -0.43
LINC01616-201ENST00000561816 U3KPZ7 1027 aaPredicted RBP12.34□□□□□ -0.43
LINC01616-201ENST00000561816 BBXQ8WY36 941 aaPredicted RBP12.29□□□□□ -0.44
LINC01616-201ENST00000561816 ZNF219Q9P2Y4 722 aaPredicted RBP12.29□□□□□ -0.44
LINC01616-201ENST00000561816 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.25□□□□□ -0.45
LINC01616-201ENST00000561816 GTF3C3Q9Y5Q9 886 aa12.25□□□□□ -0.45
LINC01616-201ENST00000561816 RGL2O15211 777 aa12.23□□□□□ -0.45
LINC01616-201ENST00000561816 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.22□□□□□ -0.45
LINC01616-201ENST00000561816 SAMD1Q6SPF0 538 aaPredicted RBP12.22□□□□□ -0.45
LINC01616-201ENST00000561816 DCAF8L1A6NGE4 600 aa12.19□□□□□ -0.46
LINC01616-201ENST00000561816 ECM2O94769 699 aaPredicted RBP12.18□□□□□ -0.46
LINC01616-201ENST00000561816 ARXQ96QS3 562 aa12.16□□□□□ -0.46
LINC01616-201ENST00000561816 SPRYD3Q8NCJ5 442 aa12.11□□□□□ -0.47
LINC01616-201ENST00000561816 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.08□□□□□ -0.48
LINC01616-201ENST00000561816 HNRNPUL2Q1KMD3 747 aaKnown RBP12.08□□□□□ -0.48
LINC01616-201ENST00000561816 NBR1Q14596 966 aa12.04□□□□□ -0.48
LINC01616-201ENST00000561816 TMEM132AQ24JP5 1023 aa12.03□□□□□ -0.48
LINC01616-201ENST00000561816 DNAJC5Q9H3Z4 198 aa12.03□□□□□ -0.48
LINC01616-201ENST00000561816 POTEDQ86YR6 584 aa12.02□□□□□ -0.49
LINC01616-201ENST00000561816 CHGAP10645 457 aaKnown RBP12□□□□□ -0.49
LINC01616-201ENST00000561816 KLHL34Q8N239 644 aa12□□□□□ -0.49
LINC01616-201ENST00000561816 SPOCK2Q92563 424 aa11.99□□□□□ -0.49
LINC01616-201ENST00000561816 HOMEZQ8IX15 550 aa11.9□□□□□ -0.5
LINC01616-201ENST00000561816 C14orf37Q86TY3 774 aa11.88□□□□□ -0.51
LINC01616-201ENST00000561816 NKX1-1Q15270 411 aaPredicted RBP11.82□□□□□ -0.52
LINC01616-201ENST00000561816 POLA2Q14181 598 aa11.81□□□□□ -0.52
LINC01616-201ENST00000561816 RNF25Q96BH1 459 aaPredicted RBP11.8□□□□□ -0.52
LINC01616-201ENST00000561816 SPINK5Q9NQ38 1064 aaPredicted RBP11.79□□□□□ -0.52
LINC01616-201ENST00000561816 SUPT5HO00267 1087 aaKnown RBP11.79□□□□□ -0.52
LINC01616-201ENST00000561816 TRHP20396 242 aaPredicted RBP11.76□□□□□ -0.53
LINC01616-201ENST00000561816 CIZ1Q9ULV3 898 aaPredicted RBP11.75□□□□□ -0.53
LINC01616-201ENST00000561816 PLCD3Q8N3E9 789 aa11.72□□□□□ -0.53
LINC01616-201ENST00000561816 HS6ST3Q8IZP7 471 aa11.7□□□□□ -0.54
LINC01616-201ENST00000561816 CCDC180Q9P1Z9 1646 aa11.69□□□□□ -0.54
LINC01616-201ENST00000561816 GTPBP6O43824 516 aaPredicted RBP11.67□□□□□ -0.54
LINC01616-201ENST00000561816 PODXL2Q9NZ53 605 aa11.65□□□□□ -0.55
LINC01616-201ENST00000561816 MIER1Q8N108 512 aa11.63□□□□□ -0.55
LINC01616-201ENST00000561816 BRPF1P55201 1214 aaPredicted RBP11.63□□□□□ -0.55
LINC01616-201ENST00000561816 ERICH6Q7L0X2 663 aa11.62□□□□□ -0.55
LINC01616-201ENST00000561816 UBTFP17480 764 aaKnown RBP11.57□□□□□ -0.56
LINC01616-201ENST00000561816 ABCB7O75027 752 aa11.53□□□□□ -0.56
LINC01616-201ENST00000561816 ZCCHC6Q5VYS8 1495 aaKnown RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms