RNA–Protein interactions for RNA: ENST00000527289.1

AP003038.1-201, humanhuman

BASIC

Gene AP003038.1, Length 1,754 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003038.1-201ENST00000527289 NISCHQ9Y2I1 1504 aa22.23■■□□□ 1.15
AP003038.1-201ENST00000527289 AEBP2Q6ZN18 517 aaPredicted RBP19.85■□□□□ 0.77
AP003038.1-201ENST00000527289 CCDC180Q9P1Z9 1646 aa19.12■□□□□ 0.65
AP003038.1-201ENST00000527289 CHIC1Q5VXU3 224 aa19.11■□□□□ 0.65
AP003038.1-201ENST00000527289 ZCCHC6Q5VYS8 1495 aaKnown RBP18.86■□□□□ 0.61
AP003038.1-201ENST00000527289 SHROOM4Q9ULL8 1493 aa18.6■□□□□ 0.57
AP003038.1-201ENST00000527289 DCAF1Q9Y4B6 1507 aa18.47■□□□□ 0.55
AP003038.1-201ENST00000527289 SUPT5HO00267 1087 aaKnown RBP18.34■□□□□ 0.53
AP003038.1-201ENST00000527289 DCAF8L2P0C7V8 631 aa17.96■□□□□ 0.47
AP003038.1-201ENST00000527289 MYO15BQ96JP2 1530 aa17.94■□□□□ 0.46
AP003038.1-201ENST00000527289 ABCC9O60706 1549 aa17.86■□□□□ 0.45
AP003038.1-201ENST00000527289 HRCP23327 699 aa17.72■□□□□ 0.43
AP003038.1-201ENST00000527289 SCRIBQ14160 1630 aa17.58■□□□□ 0.41
AP003038.1-201ENST00000527289 NACADO15069 1562 aa17.56■□□□□ 0.4
AP003038.1-201ENST00000527289 RB1CC1Q8TDY2 1594 aa17.53■□□□□ 0.4
AP003038.1-201ENST00000527289 RSF1Q96T23 1441 aaPredicted RBP17.52■□□□□ 0.4
AP003038.1-201ENST00000527289 PCGF6Q9BYE7 350 aa17.47■□□□□ 0.39
AP003038.1-201ENST00000527289 TRIM26Q12899 539 aaPredicted RBP17.34■□□□□ 0.37
AP003038.1-201ENST00000527289 LOC105371045A0A1W2PR82 267 aa17.29■□□□□ 0.36
AP003038.1-201ENST00000527289 TRIM41Q8WV44 630 aa17.24■□□□□ 0.35
AP003038.1-201ENST00000527289 ZEB1P37275 1124 aaPredicted RBP17.2■□□□□ 0.34
AP003038.1-201ENST00000527289 BAZ1AQ9NRL2 1556 aaPredicted RBP17.19■□□□□ 0.34
AP003038.1-201ENST00000527289 MROH2BQ7Z745 1585 aa17.16■□□□□ 0.34
AP003038.1-201ENST00000527289 WIZO95785 1651 aa17.12■□□□□ 0.33
AP003038.1-201ENST00000527289 CECR2Q9BXF3 1484 aa17.12■□□□□ 0.33
AP003038.1-201ENST00000527289 SENP3Q9H4L4 574 aaPredicted RBP17.1■□□□□ 0.33
AP003038.1-201ENST00000527289 EIF4G1Q04637 1599 aaKnown RBP17.06■□□□□ 0.32
AP003038.1-201ENST00000527289 PPARGC1BQ86YN6 1023 aaKnown RBP17■□□□□ 0.31
AP003038.1-201ENST00000527289 TOP2AP11388 1531 aaKnown RBP17■□□□□ 0.31
AP003038.1-201ENST00000527289 SMARCA4P51532 1647 aa16.95■□□□□ 0.3
AP003038.1-201ENST00000527289 UNC13AQ9UPW8 1703 aa16.93■□□□□ 0.3
AP003038.1-201ENST00000527289 FAM9AQ8IZU1 332 aaPredicted RBP16.86■□□□□ 0.29
AP003038.1-201ENST00000527289 SMARCA2P51531 1590 aa16.83■□□□□ 0.29
AP003038.1-201ENST00000527289 EEA1Q15075 1411 aa16.82■□□□□ 0.28
AP003038.1-201ENST00000527289 PHF23Q9BUL5 403 aaPredicted RBP16.81■□□□□ 0.28
AP003038.1-201ENST00000527289 WRNQ14191 1432 aaPredicted RBP eCLIP16.77■□□□□ 0.27
AP003038.1-201ENST00000527289 CCDC88BA6NC98 1476 aa16.76■□□□□ 0.27
AP003038.1-201ENST00000527289 PEG3Q9GZU2 1588 aa16.73■□□□□ 0.27
AP003038.1-201ENST00000527289 ABCC8Q09428 1581 aa16.67■□□□□ 0.26
AP003038.1-201ENST00000527289 TNIKQ9UKE5 1360 aa16.66■□□□□ 0.26
AP003038.1-201ENST00000527289 CEP162Q5TB80 1403 aa16.61■□□□□ 0.25
AP003038.1-201ENST00000527289 BICRAQ9NZM4 1560 aa16.59■□□□□ 0.25
AP003038.1-201ENST00000527289 GOLGA3Q08378 1498 aa16.58■□□□□ 0.24
AP003038.1-201ENST00000527289 PELP1Q8IZL8 1130 aaKnown RBP16.56■□□□□ 0.24
AP003038.1-201ENST00000527289 KIF21BO75037 1637 aa16.55■□□□□ 0.24
AP003038.1-201ENST00000527289 EHMT2Q96KQ7 1210 aa16.53■□□□□ 0.24
AP003038.1-201ENST00000527289 CSRNP3Q8WYN3 585 aa16.51■□□□□ 0.23
AP003038.1-201ENST00000527289 SOGA1O94964 1423 aa16.5■□□□□ 0.23
AP003038.1-201ENST00000527289 CCER1Q8TC90 406 aaPredicted RBP16.49■□□□□ 0.23
AP003038.1-201ENST00000527289 CEP164Q9UPV0 1460 aa16.49■□□□□ 0.23
AP003038.1-201ENST00000527289 BAZ1BQ9UIG0 1483 aaKnown RBP16.45■□□□□ 0.22
AP003038.1-201ENST00000527289 SYNJ1O43426 1573 aa16.4■□□□□ 0.22
AP003038.1-201ENST00000527289 ATAD2BQ9ULI0 1458 aa16.4■□□□□ 0.22
AP003038.1-201ENST00000527289 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.38■□□□□ 0.21
AP003038.1-201ENST00000527289 UBTFP17480 764 aaKnown RBP16.38■□□□□ 0.21
AP003038.1-201ENST00000527289 RUSC2Q8N2Y8 1516 aa16.37■□□□□ 0.21
AP003038.1-201ENST00000527289 TOP2BQ02880 1626 aa16.33■□□□□ 0.21
AP003038.1-201ENST00000527289 BIVM-ERCC5R4GMW8 1640 aa16.33■□□□□ 0.21
AP003038.1-201ENST00000527289 VPS8Q8N3P4 1428 aa16.3■□□□□ 0.2
AP003038.1-201ENST00000527289 CLIP1P30622 1438 aa16.29■□□□□ 0.2
AP003038.1-201ENST00000527289 ERICH3Q5RHP9 1530 aa16.28■□□□□ 0.2
AP003038.1-201ENST00000527289 CENPBP07199 599 aaPredicted RBP16.26■□□□□ 0.19
AP003038.1-201ENST00000527289 DIEXFQ68CQ4 756 aaKnown RBP16.26■□□□□ 0.19
AP003038.1-201ENST00000527289 PABPN1Q86U42 306 aaKnown RBP eCLIP16.26■□□□□ 0.19
AP003038.1-201ENST00000527289 HMGXB3Q12766 1538 aa16.25■□□□□ 0.19
AP003038.1-201ENST00000527289 SCAF1Q9H7N4 1312 aaKnown RBP16.24■□□□□ 0.19
AP003038.1-201ENST00000527289 ACIN1Q9UKV3 1341 aaKnown RBP16.22■□□□□ 0.19
AP003038.1-201ENST00000527289 APLP2Q06481 763 aa16.19■□□□□ 0.18
AP003038.1-201ENST00000527289 PRDM2Q13029 1718 aa16.18■□□□□ 0.18
AP003038.1-201ENST00000527289 RAPGEF2Q9Y4G8 1499 aa16.17■□□□□ 0.18
AP003038.1-201ENST00000527289 ZNF316A6NFI3 1004 aaPredicted RBP16.16■□□□□ 0.18
AP003038.1-201ENST00000527289 NCAPD3P42695 1498 aa16.13■□□□□ 0.17
AP003038.1-201ENST00000527289 CLSPNQ9HAW4 1339 aa16.13■□□□□ 0.17
AP003038.1-201ENST00000527289 PRXQ9BXM0 1461 aa16.12■□□□□ 0.17
AP003038.1-201ENST00000527289 TTBK1Q5TCY1 1321 aaPredicted RBP16.09■□□□□ 0.17
AP003038.1-201ENST00000527289 KIF27Q86VH2 1401 aa16.04■□□□□ 0.16
AP003038.1-201ENST00000527289 NEUROD1Q13562 356 aa16.03■□□□□ 0.16
AP003038.1-201ENST00000527289 CUX1P39880 1505 aa16.01■□□□□ 0.15
AP003038.1-201ENST00000527289 CFTRP13569 1480 aa16.01■□□□□ 0.15
AP003038.1-201ENST00000527289 ARAP1Q96P48 1450 aa16.01■□□□□ 0.15
AP003038.1-201ENST00000527289 HNRNPUL2Q1KMD3 747 aaKnown RBP15.98■□□□□ 0.15
AP003038.1-201ENST00000527289 RRBP1Q9P2E9 1410 aaKnown RBP15.95■□□□□ 0.14
AP003038.1-201ENST00000527289 CUX2O14529 1486 aa15.94■□□□□ 0.14
AP003038.1-201ENST00000527289 MAP3K1Q13233 1512 aa15.94■□□□□ 0.14
AP003038.1-201ENST00000527289 GTF3C3Q9Y5Q9 886 aa15.92■□□□□ 0.14
AP003038.1-201ENST00000527289 MYT1Q01538 1121 aa15.92■□□□□ 0.14
AP003038.1-201ENST00000527289 DHX57Q6P158 1386 aaKnown RBP15.87■□□□□ 0.13
AP003038.1-201ENST00000527289 ARHGAP35Q9NRY4 1499 aa15.85■□□□□ 0.13
AP003038.1-201ENST00000527289 CCNB3Q8WWL7 1395 aa15.82■□□□□ 0.12
AP003038.1-201ENST00000527289 TIAM1Q13009 1591 aa15.81■□□□□ 0.12
AP003038.1-201ENST00000527289 FOXD1Q16676 465 aa15.8■□□□□ 0.12
AP003038.1-201ENST00000527289 CFAP43Q8NDM7 1665 aa15.79■□□□□ 0.12
AP003038.1-201ENST00000527289 MIER1Q8N108 512 aa15.77■□□□□ 0.12
AP003038.1-201ENST00000527289 FHAD1B1AJZ9 1412 aa15.77■□□□□ 0.12
AP003038.1-201ENST00000527289 CADPSQ9ULU8 1353 aa15.76■□□□□ 0.11
AP003038.1-201ENST00000527289 RANGAP1P46060 587 aaPredicted RBP15.75■□□□□ 0.11
AP003038.1-201ENST00000527289 IGF1RP08069 1367 aa15.73■□□□□ 0.11
AP003038.1-201ENST00000527289 KANK4Q5T7N3 995 aaPredicted RBP15.73■□□□□ 0.11
AP003038.1-201ENST00000527289 CC2D2AQ9P2K1 1620 aa15.72■□□□□ 0.11
AP003038.1-201ENST00000527289 EFCAB5A4FU69 1503 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms