RNA–Protein interactions for RNA: ENST00000545061.5

SCN8A-203, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5 BASIC

Gene SCN8A, Length 11,433 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-203ENST00000545061 PELP1Q8IZL8 1130 aaKnown RBP15.54■□□□□ 0.08
SCN8A-203ENST00000545061 MYT1Q01538 1121 aa15.36■□□□□ 0.05
SCN8A-203ENST00000545061 CCER1Q8TC90 406 aaPredicted RBP14.72□□□□□ -0.05
SCN8A-203ENST00000545061 ERICH6Q7L0X2 663 aa14.65□□□□□ -0.06
SCN8A-203ENST00000545061 YTHDC1Q96MU7 727 aaKnown RBP14.58□□□□□ -0.08
SCN8A-203ENST00000545061 TTBK1Q5TCY1 1321 aaPredicted RBP14.54□□□□□ -0.08
SCN8A-203ENST00000545061 CENPBP07199 599 aaPredicted RBP14.16□□□□□ -0.14
SCN8A-203ENST00000545061 NEFLP07196 543 aa13.85□□□□□ -0.19
SCN8A-203ENST00000545061 DAXXQ9UER7 740 aaPredicted RBP13.82□□□□□ -0.2
SCN8A-203ENST00000545061 ZEB1P37275 1124 aaPredicted RBP13.66□□□□□ -0.22
SCN8A-203ENST00000545061 GLIPR1L2Q4G1C9 344 aa13.62□□□□□ -0.23
SCN8A-203ENST00000545061 RTL5Q5HYW3 569 aaPredicted RBP13.58□□□□□ -0.23
SCN8A-203ENST00000545061 APLP2Q06481 763 aa13.52□□□□□ -0.24
SCN8A-203ENST00000545061 ZNF316A6NFI3 1004 aaPredicted RBP13.39□□□□□ -0.27
SCN8A-203ENST00000545061 FAM9AQ8IZU1 332 aaPredicted RBP13.34□□□□□ -0.27
SCN8A-203ENST00000545061 CLSPNQ9HAW4 1339 aa13.34□□□□□ -0.27
SCN8A-203ENST00000545061 RANGAP1P46060 587 aaPredicted RBP13.33□□□□□ -0.28
SCN8A-203ENST00000545061 DCAF8L2P0C7V8 631 aa13.32□□□□□ -0.28
SCN8A-203ENST00000545061 MYT1LQ9UL68 1186 aa13.08□□□□□ -0.32
SCN8A-203ENST00000545061 PCGF6Q9BYE7 350 aa13.07□□□□□ -0.32
SCN8A-203ENST00000545061 EIF5BO60841 1220 aaKnown RBP13.05□□□□□ -0.32
SCN8A-203ENST00000545061 SUPT5HO00267 1087 aaKnown RBP13.02□□□□□ -0.32
SCN8A-203ENST00000545061 ANP32BQ92688 251 aaKnown RBP13.02□□□□□ -0.33
SCN8A-203ENST00000545061 TNNT2P45379 298 aaPredicted RBP12.95□□□□□ -0.34
SCN8A-203ENST00000545061 CDK11AQ9UQ88 783 aaPredicted RBP12.79□□□□□ -0.36
SCN8A-203ENST00000545061 EHMT2Q96KQ7 1210 aa12.77□□□□□ -0.37
SCN8A-203ENST00000545061 CDK11BP21127 795 aaKnown RBP12.75□□□□□ -0.37
SCN8A-203ENST00000545061 ANP32AP39687 249 aaKnown RBP12.75□□□□□ -0.37
SCN8A-203ENST00000545061 TRIM44Q96DX7 344 aaPredicted RBP12.74□□□□□ -0.37
SCN8A-203ENST00000545061 NCLP19338 710 aaKnown RBP12.73□□□□□ -0.37
SCN8A-203ENST00000545061 POLR3GLQ9BT43 218 aa12.71□□□□□ -0.37
SCN8A-203ENST00000545061 ZBTB47Q9UFB7 747 aaPredicted RBP12.7□□□□□ -0.38
SCN8A-203ENST00000545061 HRCP23327 699 aa12.56□□□□□ -0.4
SCN8A-203ENST00000545061 ZNF326Q5BKZ1 582 aaKnown RBP12.52□□□□□ -0.41
SCN8A-203ENST00000545061 NEFMP07197 916 aa12.52□□□□□ -0.41
SCN8A-203ENST00000545061 HSP90AA1P07900 732 aaKnown RBP12.49□□□□□ -0.41
SCN8A-203ENST00000545061 TRIM26Q12899 539 aaPredicted RBP12.48□□□□□ -0.41
SCN8A-203ENST00000545061 ANP32EQ9BTT0 268 aa12.47□□□□□ -0.41
SCN8A-203ENST00000545061 UPF2Q9HAU5 1272 aaKnown RBP12.47□□□□□ -0.41
SCN8A-203ENST00000545061 DIEXFQ68CQ4 756 aaKnown RBP12.44□□□□□ -0.42
SCN8A-203ENST00000545061 CALRP27797 417 aaKnown RBP12.4□□□□□ -0.42
SCN8A-203ENST00000545061 GTF3C3Q9Y5Q9 886 aa12.4□□□□□ -0.42
SCN8A-203ENST00000545061 ATP1B4Q9UN42 357 aaPredicted RBP12.37□□□□□ -0.43
SCN8A-203ENST00000545061 ERICH6BQ5W0A0 696 aa12.37□□□□□ -0.43
SCN8A-203ENST00000545061 PTMSP20962 102 aa12.36□□□□□ -0.43
SCN8A-203ENST00000545061 CANXP27824 592 aaKnown RBP12.33□□□□□ -0.44
SCN8A-203ENST00000545061 SHROOM4Q9ULL8 1493 aa12.28□□□□□ -0.44
SCN8A-203ENST00000545061 UBTFP17480 764 aaKnown RBP12.26□□□□□ -0.45
SCN8A-203ENST00000545061 SLC4A1APQ9BWU0 796 aaKnown RBP12.25□□□□□ -0.45
SCN8A-203ENST00000545061 ANP32CO43423 234 aa12.23□□□□□ -0.45
SCN8A-203ENST00000545061 BCANQ96GW7 911 aa12.22□□□□□ -0.45
SCN8A-203ENST00000545061 TRIM41Q8WV44 630 aa12.21□□□□□ -0.45
SCN8A-203ENST00000545061 DNTTIP2Q5QJE6 756 aaKnown RBP12.2□□□□□ -0.46
SCN8A-203ENST00000545061 NPM2Q86SE8 214 aaKnown RBP12.2□□□□□ -0.46
SCN8A-203ENST00000545061 TNNT3P45378 269 aaPredicted RBP12.2□□□□□ -0.46
SCN8A-203ENST00000545061 NBR1Q14596 966 aa12.19□□□□□ -0.46
SCN8A-203ENST00000545061 GOLGA6L22H0YM25 854 aa12.18□□□□□ -0.46
SCN8A-203ENST00000545061 NAP1L5Q96NT1 182 aaPredicted RBP12.18□□□□□ -0.46
SCN8A-203ENST00000545061 CHAF1AQ13111 956 aaPredicted RBP12.18□□□□□ -0.46
SCN8A-203ENST00000545061 GOLGA6L6A8MZA4 724 aa12.15□□□□□ -0.46
SCN8A-203ENST00000545061 SLC24A1O60721 1099 aa12.15□□□□□ -0.46
SCN8A-203ENST00000545061 DDRGK1Q96HY6 314 aa12.15□□□□□ -0.47
SCN8A-203ENST00000545061 BECN1Q14457 450 aa12.14□□□□□ -0.47
SCN8A-203ENST00000545061 L1TD1Q5T7N2 865 aaKnown RBP12.13□□□□□ -0.47
SCN8A-203ENST00000545061 NRDCO43847 1150 aa12.12□□□□□ -0.47
SCN8A-203ENST00000545061 ACIN1Q9UKV3 1341 aaKnown RBP12.12□□□□□ -0.47
SCN8A-203ENST00000545061 PTMAP06454 111 aaKnown RBP12.12□□□□□ -0.47
SCN8A-203ENST00000545061 ZRSR1Q15695 479 aaKnown RBP12.11□□□□□ -0.47
SCN8A-203ENST00000545061 USP35Q9P2H5 1018 aa12.08□□□□□ -0.48
SCN8A-203ENST00000545061 CNGB1Q14028 1251 aaPredicted RBP12.07□□□□□ -0.48
SCN8A-203ENST00000545061 ARXQ96QS3 562 aa12.06□□□□□ -0.48
SCN8A-203ENST00000545061 SETQ01105 290 aaPredicted RBP12.06□□□□□ -0.48
SCN8A-203ENST00000545061 AMER1Q5JTC6 1135 aaPredicted RBP12.06□□□□□ -0.48
SCN8A-203ENST00000545061 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.02□□□□□ -0.49
SCN8A-203ENST00000545061 PNNQ9H307 717 aaKnown RBP12□□□□□ -0.49
SCN8A-203ENST00000545061 A0A0U1RQG5 324 aaPredicted RBP11.98□□□□□ -0.49
SCN8A-203ENST00000545061 BCL11AQ9H165 835 aa11.98□□□□□ -0.49
SCN8A-203ENST00000545061 MSNP26038 577 aaKnown RBP11.98□□□□□ -0.49
SCN8A-203ENST00000545061 PPM1GO15355 546 aaPredicted RBP11.96□□□□□ -0.49
SCN8A-203ENST00000545061 APPP05067 770 aa11.94□□□□□ -0.5
SCN8A-203ENST00000545061 GOLGA6L1Q8N7Z2 621 aa11.94□□□□□ -0.5
SCN8A-203ENST00000545061 ARID4BQ4LE39 1312 aaPredicted RBP11.9□□□□□ -0.5
SCN8A-203ENST00000545061 CCDC136Q96JN2 1154 aa11.9□□□□□ -0.5
SCN8A-203ENST00000545061 ITGAEP38570 1179 aa11.9□□□□□ -0.5
SCN8A-203ENST00000545061 LAS1LQ9Y4W2 734 aaKnown RBP11.9□□□□□ -0.51
SCN8A-203ENST00000545061 FKBP8Q14318 412 aa11.89□□□□□ -0.51
SCN8A-203ENST00000545061 MYH16Q9H6N6 1097 aa11.89□□□□□ -0.51
SCN8A-203ENST00000545061 STK11IPQ8N1F8 1099 aa11.88□□□□□ -0.51
SCN8A-203ENST00000545061 GOLGA6L4A6NEF3 574 aa11.88□□□□□ -0.51
SCN8A-203ENST00000545061 CASC1Q6TDU7 716 aa11.84□□□□□ -0.51
SCN8A-203ENST00000545061 KIAA2012Q0VF49 1180 aa11.83□□□□□ -0.52
SCN8A-203ENST00000545061 NOC3LQ8WTT2 800 aaKnown RBP11.83□□□□□ -0.52
SCN8A-203ENST00000545061 HNRNPUL2Q1KMD3 747 aaKnown RBP11.82□□□□□ -0.52
SCN8A-203ENST00000545061 GOLGA6L3A6NEY3 463 aa11.8□□□□□ -0.52
SCN8A-203ENST00000545061 HSP90AA2PQ14568 343 aaPredicted RBP11.79□□□□□ -0.52
SCN8A-203ENST00000545061 RSPH6AQ9H0K4 717 aa11.78□□□□□ -0.52
SCN8A-203ENST00000545061 RTN4Q9NQC3 1192 aaKnown RBP11.78□□□□□ -0.52
SCN8A-203ENST00000545061 PPARGC1BQ86YN6 1023 aaKnown RBP11.77□□□□□ -0.52
SCN8A-203ENST00000545061 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.77□□□□□ -0.52
SCN8A-203ENST00000545061 NEUROD1Q13562 356 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms