RNA–Protein interactions for RNA: ENST00000544909.5

PAAF1-215, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-215ENST00000544909 NISCHQ9Y2I1 1504 aa26.45■■□□□ 1.83
PAAF1-215ENST00000544909 CCDC180Q9P1Z9 1646 aa22.81■■□□□ 1.24
PAAF1-215ENST00000544909 ZCCHC6Q5VYS8 1495 aaKnown RBP22.42■■□□□ 1.18
PAAF1-215ENST00000544909 DCAF1Q9Y4B6 1507 aa22.03■■□□□ 1.12
PAAF1-215ENST00000544909 SHROOM4Q9ULL8 1493 aa21.83■■□□□ 1.09
PAAF1-215ENST00000544909 MYO15BQ96JP2 1530 aa21.53■■□□□ 1.04
PAAF1-215ENST00000544909 SUPT5HO00267 1087 aaKnown RBP21.41■■□□□ 1.02
PAAF1-215ENST00000544909 DCAF8L2P0C7V8 631 aa21.31■■□□□ 1
PAAF1-215ENST00000544909 ABCC9O60706 1549 aa21.13■□□□□ 0.97
PAAF1-215ENST00000544909 NACADO15069 1562 aa21.06■□□□□ 0.96
PAAF1-215ENST00000544909 CHIC1Q5VXU3 224 aa21■□□□□ 0.95
PAAF1-215ENST00000544909 SCRIBQ14160 1630 aa20.88■□□□□ 0.93
PAAF1-215ENST00000544909 RSF1Q96T23 1441 aaPredicted RBP20.78■□□□□ 0.92
PAAF1-215ENST00000544909 RB1CC1Q8TDY2 1594 aa20.67■□□□□ 0.9
PAAF1-215ENST00000544909 BAZ1AQ9NRL2 1556 aaPredicted RBP20.41■□□□□ 0.86
PAAF1-215ENST00000544909 MROH2BQ7Z745 1585 aa20.39■□□□□ 0.85
PAAF1-215ENST00000544909 CECR2Q9BXF3 1484 aa20.38■□□□□ 0.85
PAAF1-215ENST00000544909 WIZO95785 1651 aa20.23■□□□□ 0.83
PAAF1-215ENST00000544909 TRIM41Q8WV44 630 aa20.18■□□□□ 0.82
PAAF1-215ENST00000544909 TOP2AP11388 1531 aaKnown RBP20.17■□□□□ 0.82
PAAF1-215ENST00000544909 SMARCA4P51532 1647 aa20.17■□□□□ 0.82
PAAF1-215ENST00000544909 UNC13AQ9UPW8 1703 aa20.16■□□□□ 0.82
PAAF1-215ENST00000544909 HRCP23327 699 aa20.16■□□□□ 0.82
PAAF1-215ENST00000544909 EIF4G1Q04637 1599 aaKnown RBP20.15■□□□□ 0.82
PAAF1-215ENST00000544909 LOC105371045A0A1W2PR82 267 aa20.08■□□□□ 0.8
PAAF1-215ENST00000544909 PEG3Q9GZU2 1588 aa20.01■□□□□ 0.79
PAAF1-215ENST00000544909 PCGF6Q9BYE7 350 aa20■□□□□ 0.79
PAAF1-215ENST00000544909 TRIM26Q12899 539 aaPredicted RBP19.96■□□□□ 0.79
PAAF1-215ENST00000544909 SMARCA2P51531 1590 aa19.96■□□□□ 0.79
PAAF1-215ENST00000544909 BICRAQ9NZM4 1560 aa19.96■□□□□ 0.79
PAAF1-215ENST00000544909 CCDC88BA6NC98 1476 aa19.89■□□□□ 0.78
PAAF1-215ENST00000544909 EEA1Q15075 1411 aa19.8■□□□□ 0.76
PAAF1-215ENST00000544909 ZEB1P37275 1124 aaPredicted RBP19.67■□□□□ 0.74
PAAF1-215ENST00000544909 FAM9AQ8IZU1 332 aaPredicted RBP19.66■□□□□ 0.74
PAAF1-215ENST00000544909 ATAD2BQ9ULI0 1458 aa19.65■□□□□ 0.74
PAAF1-215ENST00000544909 ABCC8Q09428 1581 aa19.64■□□□□ 0.73
PAAF1-215ENST00000544909 WRNQ14191 1432 aaPredicted RBP eCLIP19.6■□□□□ 0.73
PAAF1-215ENST00000544909 BAZ1BQ9UIG0 1483 aaKnown RBP19.58■□□□□ 0.72
PAAF1-215ENST00000544909 PABPN1Q86U42 306 aaKnown RBP eCLIP19.55■□□□□ 0.72
PAAF1-215ENST00000544909 TNIKQ9UKE5 1360 aa19.54■□□□□ 0.72
PAAF1-215ENST00000544909 HMGXB3Q12766 1538 aa19.49■□□□□ 0.71
PAAF1-215ENST00000544909 GOLGA3Q08378 1498 aa19.45■□□□□ 0.7
PAAF1-215ENST00000544909 SOGA1O94964 1423 aa19.45■□□□□ 0.7
PAAF1-215ENST00000544909 CSRNP3Q8WYN3 585 aa19.44■□□□□ 0.7
PAAF1-215ENST00000544909 CEP162Q5TB80 1403 aa19.43■□□□□ 0.7
PAAF1-215ENST00000544909 KIF21BO75037 1637 aa19.43■□□□□ 0.7
PAAF1-215ENST00000544909 NCAPD3P42695 1498 aa19.41■□□□□ 0.7
PAAF1-215ENST00000544909 CEP164Q9UPV0 1460 aa19.4■□□□□ 0.7
PAAF1-215ENST00000544909 SYNJ1O43426 1573 aa19.39■□□□□ 0.69
PAAF1-215ENST00000544909 TOP2BQ02880 1626 aa19.34■□□□□ 0.69
PAAF1-215ENST00000544909 PPARGC1BQ86YN6 1023 aaKnown RBP19.33■□□□□ 0.69
PAAF1-215ENST00000544909 BIVM-ERCC5R4GMW8 1640 aa19.31■□□□□ 0.68
PAAF1-215ENST00000544909 RUSC2Q8N2Y8 1516 aa19.28■□□□□ 0.68
PAAF1-215ENST00000544909 EHMT2Q96KQ7 1210 aa19.22■□□□□ 0.67
PAAF1-215ENST00000544909 ERICH3Q5RHP9 1530 aa19.2■□□□□ 0.66
PAAF1-215ENST00000544909 CFTRP13569 1480 aa19.17■□□□□ 0.66
PAAF1-215ENST00000544909 UBTFP17480 764 aaKnown RBP19.17■□□□□ 0.66
PAAF1-215ENST00000544909 PRDM2Q13029 1718 aa19.13■□□□□ 0.65
PAAF1-215ENST00000544909 CLIP1P30622 1438 aa19.12■□□□□ 0.65
PAAF1-215ENST00000544909 VPS8Q8N3P4 1428 aa19.11■□□□□ 0.65
PAAF1-215ENST00000544909 PRXQ9BXM0 1461 aa19.09■□□□□ 0.65
PAAF1-215ENST00000544909 RAPGEF2Q9Y4G8 1499 aa19.06■□□□□ 0.64
PAAF1-215ENST00000544909 CUX1P39880 1505 aa19.04■□□□□ 0.64
PAAF1-215ENST00000544909 KIF27Q86VH2 1401 aa19.02■□□□□ 0.63
PAAF1-215ENST00000544909 CCER1Q8TC90 406 aaPredicted RBP18.97■□□□□ 0.63
PAAF1-215ENST00000544909 CADPSQ9ULU8 1353 aa18.92■□□□□ 0.62
PAAF1-215ENST00000544909 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.88■□□□□ 0.61
PAAF1-215ENST00000544909 APLP2Q06481 763 aa18.86■□□□□ 0.61
PAAF1-215ENST00000544909 ARAP1Q96P48 1450 aa18.82■□□□□ 0.6
PAAF1-215ENST00000544909 CC2D2AQ9P2K1 1620 aa18.79■□□□□ 0.6
PAAF1-215ENST00000544909 MAP3K1Q13233 1512 aa18.76■□□□□ 0.59
PAAF1-215ENST00000544909 CLSPNQ9HAW4 1339 aa18.74■□□□□ 0.59
PAAF1-215ENST00000544909 CUX2O14529 1486 aa18.72■□□□□ 0.59
PAAF1-215ENST00000544909 IGF1RP08069 1367 aa18.72■□□□□ 0.59
PAAF1-215ENST00000544909 FGD5Q6ZNL6 1462 aa18.71■□□□□ 0.59
PAAF1-215ENST00000544909 DNMBPQ6XZF7 1577 aa18.7■□□□□ 0.58
PAAF1-215ENST00000544909 ARHGAP35Q9NRY4 1499 aa18.7■□□□□ 0.58
PAAF1-215ENST00000544909 RRBP1Q9P2E9 1410 aaKnown RBP18.69■□□□□ 0.58
PAAF1-215ENST00000544909 FANCD2Q9BXW9 1451 aa18.68■□□□□ 0.58
PAAF1-215ENST00000544909 ABCA10Q8WWZ4 1543 aa18.65■□□□□ 0.58
PAAF1-215ENST00000544909 TTBK1Q5TCY1 1321 aaPredicted RBP18.65■□□□□ 0.58
PAAF1-215ENST00000544909 CARMIL1Q5VZK9 1371 aa18.64■□□□□ 0.57
PAAF1-215ENST00000544909 LAMC3Q9Y6N6 1575 aa18.63■□□□□ 0.57
PAAF1-215ENST00000544909 CUL7Q14999 1698 aa18.6■□□□□ 0.57
PAAF1-215ENST00000544909 FHAD1B1AJZ9 1412 aa18.59■□□□□ 0.57
PAAF1-215ENST00000544909 EFCAB5A4FU69 1503 aa18.57■□□□□ 0.56
PAAF1-215ENST00000544909 TOPBP1Q92547 1522 aa18.57■□□□□ 0.56
PAAF1-215ENST00000544909 TIAM1Q13009 1591 aa18.55■□□□□ 0.56
PAAF1-215ENST00000544909 DIEXFQ68CQ4 756 aaKnown RBP18.55■□□□□ 0.56
PAAF1-215ENST00000544909 ZNF316A6NFI3 1004 aaPredicted RBP18.54■□□□□ 0.56
PAAF1-215ENST00000544909 POLA1P09884 1462 aaPredicted RBP18.54■□□□□ 0.56
PAAF1-215ENST00000544909 HNRNPUL2Q1KMD3 747 aaKnown RBP18.53■□□□□ 0.56
PAAF1-215ENST00000544909 CCNB3Q8WWL7 1395 aa18.51■□□□□ 0.55
PAAF1-215ENST00000544909 AQRO60306 1485 aaKnown RBP eCLIP18.51■□□□□ 0.55
PAAF1-215ENST00000544909 WDR97A6NE52 1622 aa18.49■□□□□ 0.55
PAAF1-215ENST00000544909 CFAP43Q8NDM7 1665 aa18.49■□□□□ 0.55
PAAF1-215ENST00000544909 KANK4Q5T7N3 995 aaPredicted RBP18.47■□□□□ 0.55
PAAF1-215ENST00000544909 DHX57Q6P158 1386 aaKnown RBP18.46■□□□□ 0.55
PAAF1-215ENST00000544909 FYCO1Q9BQS8 1478 aa18.46■□□□□ 0.54
PAAF1-215ENST00000544909 LRRC9Q6ZRR7 1453 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms