RNA–Protein interactions for RNA: ENST00000455244.2

SCDP1-201, Transcript of stearoyl-CoA desaturase pseudogene 1, humanhuman

BASIC

Gene SCDP1, Length 1,081 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCDP1-201ENST00000455244 AEBP2Q6ZN18 517 aaPredicted RBP18.44■□□□□ 0.54
SCDP1-201ENST00000455244 CHIC1Q5VXU3 224 aa18.37■□□□□ 0.53
SCDP1-201ENST00000455244 NISCHQ9Y2I1 1504 aa18.1■□□□□ 0.49
SCDP1-201ENST00000455244 ABCC9O60706 1549 aa16.44■□□□□ 0.22
SCDP1-201ENST00000455244 PHF23Q9BUL5 403 aaPredicted RBP16.23■□□□□ 0.19
SCDP1-201ENST00000455244 CCDC180Q9P1Z9 1646 aa16.14■□□□□ 0.17
SCDP1-201ENST00000455244 SENP3Q9H4L4 574 aaPredicted RBP15.67■□□□□ 0.1
SCDP1-201ENST00000455244 DNAJC5BQ9UF47 199 aa15.65■□□□□ 0.1
SCDP1-201ENST00000455244 PLPPR3Q6T4P5 718 aa15.46■□□□□ 0.07
SCDP1-201ENST00000455244 RB1CC1Q8TDY2 1594 aa15.45■□□□□ 0.06
SCDP1-201ENST00000455244 DCAF8L2P0C7V8 631 aa15.4■□□□□ 0.06
SCDP1-201ENST00000455244 PABPN1Q86U42 306 aaKnown RBP eCLIP15.36■□□□□ 0.05
SCDP1-201ENST00000455244 NACADO15069 1562 aa15.33■□□□□ 0.05
SCDP1-201ENST00000455244 UNC13AQ9UPW8 1703 aa15.15■□□□□ 0.02
SCDP1-201ENST00000455244 BICRAQ9NZM4 1560 aa15.14■□□□□ 0.01
SCDP1-201ENST00000455244 POTEDQ86YR6 584 aa15.13■□□□□ 0.01
SCDP1-201ENST00000455244 EHMT2Q96KQ7 1210 aa15.07■□□□□ 0
SCDP1-201ENST00000455244 MYO15BQ96JP2 1530 aa15.07■□□□□ 0
SCDP1-201ENST00000455244 ZCCHC6Q5VYS8 1495 aaKnown RBP14.97□□□□□ -0.01
SCDP1-201ENST00000455244 DCAF1Q9Y4B6 1507 aa14.86□□□□□ -0.03
SCDP1-201ENST00000455244 SCRIBQ14160 1630 aa14.84□□□□□ -0.03
SCDP1-201ENST00000455244 CC2D2AQ9P2K1 1620 aa14.78□□□□□ -0.04
SCDP1-201ENST00000455244 CECR2Q9BXF3 1484 aa14.77□□□□□ -0.04
SCDP1-201ENST00000455244 EIF4G1Q04637 1599 aaKnown RBP14.73□□□□□ -0.05
SCDP1-201ENST00000455244 SHROOM4Q9ULL8 1493 aa14.72□□□□□ -0.05
SCDP1-201ENST00000455244 KCNA4P22459 653 aa14.69□□□□□ -0.06
SCDP1-201ENST00000455244 FOXD1Q16676 465 aa14.55□□□□□ -0.08
SCDP1-201ENST00000455244 SLC24A1O60721 1099 aa14.45□□□□□ -0.1
SCDP1-201ENST00000455244 CSRNP3Q8WYN3 585 aa14.44□□□□□ -0.1
SCDP1-201ENST00000455244 ADRA2BP18089 450 aa14.32□□□□□ -0.12
SCDP1-201ENST00000455244 DNAJC5Q9H3Z4 198 aa14.3□□□□□ -0.12
SCDP1-201ENST00000455244 SLC4A1APQ9BWU0 796 aaKnown RBP14.23□□□□□ -0.13
SCDP1-201ENST00000455244 NCAPD3P42695 1498 aa14.22□□□□□ -0.13
SCDP1-201ENST00000455244 ATAD2BQ9ULI0 1458 aa14.2□□□□□ -0.14
SCDP1-201ENST00000455244 NESP48681 1621 aa14.13□□□□□ -0.15
SCDP1-201ENST00000455244 SMARCA4P51532 1647 aa14.11□□□□□ -0.15
SCDP1-201ENST00000455244 ERCC6Q03468 1493 aa14.11□□□□□ -0.15
SCDP1-201ENST00000455244 CUX2O14529 1486 aa14.08□□□□□ -0.16
SCDP1-201ENST00000455244 HMGXB3Q12766 1538 aa14.05□□□□□ -0.16
SCDP1-201ENST00000455244 SMARCA2P51531 1590 aa14.05□□□□□ -0.16
SCDP1-201ENST00000455244 MROH2BQ7Z745 1585 aa14□□□□□ -0.17
SCDP1-201ENST00000455244 BAZ1BQ9UIG0 1483 aaKnown RBP14□□□□□ -0.17
SCDP1-201ENST00000455244 BAZ1AQ9NRL2 1556 aaPredicted RBP13.98□□□□□ -0.17
SCDP1-201ENST00000455244 PPP6R1Q9UPN7 881 aa13.97□□□□□ -0.17
SCDP1-201ENST00000455244 PEG3Q9GZU2 1588 aa13.95□□□□□ -0.18
SCDP1-201ENST00000455244 AMER1Q5JTC6 1135 aaPredicted RBP13.93□□□□□ -0.18
SCDP1-201ENST00000455244 THOC2Q8NI27 1593 aaKnown RBP13.9□□□□□ -0.18
SCDP1-201ENST00000455244 RTN4Q9NQC3 1192 aaKnown RBP13.85□□□□□ -0.19
SCDP1-201ENST00000455244 LAMC3Q9Y6N6 1575 aa13.84□□□□□ -0.19
SCDP1-201ENST00000455244 KIF21AQ7Z4S6 1674 aa13.83□□□□□ -0.2
SCDP1-201ENST00000455244 CADPSQ9ULU8 1353 aa13.81□□□□□ -0.2
SCDP1-201ENST00000455244 WIZO95785 1651 aa13.8□□□□□ -0.2
SCDP1-201ENST00000455244 PDS5BQ9NTI5 1447 aa13.8□□□□□ -0.2
SCDP1-201ENST00000455244 NCBP3Q53F19 620 aaKnown RBP13.77□□□□□ -0.21
SCDP1-201ENST00000455244 PIAS4Q8N2W9 510 aaPredicted RBP13.76□□□□□ -0.21
SCDP1-201ENST00000455244 PPP4R3CPQ6ZMV5 832 aa13.73□□□□□ -0.21
SCDP1-201ENST00000455244 MRC2Q9UBG0 1479 aa13.71□□□□□ -0.21
SCDP1-201ENST00000455244 RSF1Q96T23 1441 aaPredicted RBP13.68□□□□□ -0.22
SCDP1-201ENST00000455244 WDR62O43379 1518 aa13.68□□□□□ -0.22
SCDP1-201ENST00000455244 TRIM41Q8WV44 630 aa13.67□□□□□ -0.22
SCDP1-201ENST00000455244 FANCD2Q9BXW9 1451 aa13.64□□□□□ -0.23
SCDP1-201ENST00000455244 CFTRP13569 1480 aa13.62□□□□□ -0.23
SCDP1-201ENST00000455244 CEP164Q9UPV0 1460 aa13.62□□□□□ -0.23
SCDP1-201ENST00000455244 URB2Q14146 1524 aaKnown RBP13.58□□□□□ -0.24
SCDP1-201ENST00000455244 TOP2AP11388 1531 aaKnown RBP13.55□□□□□ -0.24
SCDP1-201ENST00000455244 ZBTB22O15209 634 aa13.52□□□□□ -0.25
SCDP1-201ENST00000455244 NPM3O75607 178 aaKnown RBP13.49□□□□□ -0.25
SCDP1-201ENST00000455244 OSCARQ8IYS5 282 aa13.49□□□□□ -0.25
SCDP1-201ENST00000455244 CCDC88BA6NC98 1476 aa13.48□□□□□ -0.25
SCDP1-201ENST00000455244 ZNF608Q9ULD9 1512 aaPredicted RBP13.46□□□□□ -0.25
SCDP1-201ENST00000455244 MSH5O43196 834 aa13.42□□□□□ -0.26
SCDP1-201ENST00000455244 TOPBP1Q92547 1522 aa13.38□□□□□ -0.27
SCDP1-201ENST00000455244 IFT140Q96RY7 1462 aa13.35□□□□□ -0.27
SCDP1-201ENST00000455244 AQRO60306 1485 aaKnown RBP eCLIP13.32□□□□□ -0.28
SCDP1-201ENST00000455244 PRDM2Q13029 1718 aa13.32□□□□□ -0.28
SCDP1-201ENST00000455244 RIMBP3CA6NJZ7 1639 aa13.31□□□□□ -0.28
SCDP1-201ENST00000455244 RIMBP3BA6NNM3 1639 aa13.31□□□□□ -0.28
SCDP1-201ENST00000455244 RIMBP3Q9UFD9 1639 aa13.31□□□□□ -0.28
SCDP1-201ENST00000455244 ARHGEF11O15085 1522 aa13.28□□□□□ -0.28
SCDP1-201ENST00000455244 EIF4G3O43432 1585 aaKnown RBP13.28□□□□□ -0.28
SCDP1-201ENST00000455244 DNMBPQ6XZF7 1577 aa13.27□□□□□ -0.29
SCDP1-201ENST00000455244 TARBP1Q13395 1621 aaKnown RBP13.26□□□□□ -0.29
SCDP1-201ENST00000455244 RAD54L2Q9Y4B4 1467 aa13.26□□□□□ -0.29
SCDP1-201ENST00000455244 CYB5RLQ6IPT4 315 aa13.25□□□□□ -0.29
SCDP1-201ENST00000455244 POLA1P09884 1462 aaPredicted RBP13.24□□□□□ -0.29
SCDP1-201ENST00000455244 FOXD4L1Q9NU39 408 aa13.24□□□□□ -0.29
SCDP1-201ENST00000455244 FBLN2P98095 1184 aa13.23□□□□□ -0.29
SCDP1-201ENST00000455244 TDRD9Q8NDG6 1382 aaKnown RBP13.22□□□□□ -0.29
SCDP1-201ENST00000455244 ABCC8Q09428 1581 aa13.22□□□□□ -0.29
SCDP1-201ENST00000455244 ARAP1Q96P48 1450 aa13.18□□□□□ -0.3
SCDP1-201ENST00000455244 SOGA1O94964 1423 aa13.18□□□□□ -0.3
SCDP1-201ENST00000455244 CHD1O14646 1710 aa13.18□□□□□ -0.3
SCDP1-201ENST00000455244 CUX1P39880 1505 aa13.15□□□□□ -0.3
SCDP1-201ENST00000455244 FGD5Q6ZNL6 1462 aa13.14□□□□□ -0.31
SCDP1-201ENST00000455244 SNAPC4Q5SXM2 1469 aa13.13□□□□□ -0.31
SCDP1-201ENST00000455244 CNKSR2Q8WXI2 1034 aa13.13□□□□□ -0.31
SCDP1-201ENST00000455244 TRHP20396 242 aaPredicted RBP13.09□□□□□ -0.31
SCDP1-201ENST00000455244 CHMP7Q8WUX9 453 aaPredicted RBP13.07□□□□□ -0.32
SCDP1-201ENST00000455244 CLASP1Q7Z460 1538 aa13.06□□□□□ -0.32
SCDP1-201ENST00000455244 SUPT5HO00267 1087 aaKnown RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms