Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLDN20P56880 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLDN20P56880 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLDN20P56880 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
CLDN20P56880 GUCY1B3-204ENST00000505154 2316 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CLDN20P56880 BAIAP2-202ENST00000321300 2879 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLDN20P56880 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC12.63□□□□□ -0.39
CLDN20P56880 MYRIP-203ENST00000425621 2981 ntTSL 2 BASIC12.63□□□□□ -0.39
CLDN20P56880 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC12.63□□□□□ -0.39
CLDN20P56880 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
CLDN20P56880 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CLDN20P56880 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC12.63□□□□□ -0.39
CLDN20P56880 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLDN20P56880 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLDN20P56880 NUP54-201ENST00000264883 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLDN20P56880 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CLDN20P56880 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CLDN20P56880 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLDN20P56880 USP17L7-201ENST00000530447 2022 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
CLDN20P56880 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLDN20P56880 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLDN20P56880 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC12.63□□□□□ -0.39
CLDN20P56880 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC12.63□□□□□ -0.39
CLDN20P56880 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CLDN20P56880 AL512306.1-201ENST00000432698 848 ntBASIC12.63□□□□□ -0.39
CLDN20P56880 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
CLDN20P56880 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC12.63□□□□□ -0.39
CLDN20P56880 ERP29P1-201ENST00000442902 706 ntBASIC12.63□□□□□ -0.39
CLDN20P56880 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC12.63□□□□□ -0.39
CLDN20P56880 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC12.63□□□□□ -0.39
CLDN20P56880 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC12.63□□□□□ -0.39
CLDN20P56880 RN7SL81P-201ENST00000493781 261 ntBASIC12.63□□□□□ -0.39
CLDN20P56880 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC12.63□□□□□ -0.39
CLDN20P56880 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CLDN20P56880 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC12.63□□□□□ -0.39
CLDN20P56880 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC12.63□□□□□ -0.39
CLDN20P56880 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC12.63□□□□□ -0.39
CLDN20P56880 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC12.63□□□□□ -0.39
CLDN20P56880 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CLDN20P56880 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC12.63□□□□□ -0.39
CLDN20P56880 AC084781.1-201ENST00000613737 656 ntBASIC12.63□□□□□ -0.39
CLDN20P56880 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC12.63□□□□□ -0.39
CLDN20P56880 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC12.63□□□□□ -0.39
CLDN20P56880 SPATS2-201ENST00000321898 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLDN20P56880 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLDN20P56880 AC061965.1-201ENST00000560524 1465 ntBASIC12.63□□□□□ -0.39
CLDN20P56880 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
CLDN20P56880 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC12.63□□□□□ -0.39
CLDN20P56880 HTR5A-201ENST00000287907 2912 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLDN20P56880 RASA4-203ENST00000461209 3244 ntTSL 2 BASIC12.63□□□□□ -0.39
CLDN20P56880 AC060814.4-201ENST00000594169 2163 ntBASIC12.63□□□□□ -0.39
CLDN20P56880 ZNF410-201ENST00000324593 2293 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CLDN20P56880 PRAM1-201ENST00000423345 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLDN20P56880 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CLDN20P56880 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLDN20P56880 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLDN20P56880 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC12.62□□□□□ -0.39
CLDN20P56880 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLDN20P56880 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CLDN20P56880 DDC-214ENST00000622873 1839 ntTSL 3 BASIC12.62□□□□□ -0.39
CLDN20P56880 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CLDN20P56880 CELF2-216ENST00000637215 2724 ntTSL 5 BASIC12.62□□□□□ -0.39
CLDN20P56880 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CLDN20P56880 PCDHB19P-202ENST00000625133 2914 ntBASIC12.62□□□□□ -0.39
CLDN20P56880 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
CLDN20P56880 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLDN20P56880 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLDN20P56880 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
CLDN20P56880 FBRSL1-205ENST00000542061 3175 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
CLDN20P56880 TFIP11-201ENST00000405938 2896 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
CLDN20P56880 PDE4A-204ENST00000440014 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLDN20P56880 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLDN20P56880 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLDN20P56880 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC12.62□□□□□ -0.39
CLDN20P56880 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC12.62□□□□□ -0.39
CLDN20P56880 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC12.62□□□□□ -0.39
CLDN20P56880 AC004554.1-201ENST00000422830 1468 ntBASIC12.62□□□□□ -0.39
CLDN20P56880 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC12.62□□□□□ -0.39
CLDN20P56880 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC12.62□□□□□ -0.39
CLDN20P56880 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLDN20P56880 PYY2-201ENST00000315776 282 ntBASIC12.62□□□□□ -0.39
CLDN20P56880 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLDN20P56880 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CLDN20P56880 AC069218.1-201ENST00000435269 762 ntBASIC12.62□□□□□ -0.39
CLDN20P56880 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC12.62□□□□□ -0.39
CLDN20P56880 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CLDN20P56880 SCARNA12-201ENST00000459155 270 ntBASIC12.62□□□□□ -0.39
CLDN20P56880 RN7SL788P-201ENST00000460504 316 ntBASIC12.62□□□□□ -0.39
CLDN20P56880 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC12.62□□□□□ -0.39
CLDN20P56880 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC12.62□□□□□ -0.39
CLDN20P56880 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC12.62□□□□□ -0.39
CLDN20P56880 AC145285.5-201ENST00000562217 361 ntBASIC12.62□□□□□ -0.39
CLDN20P56880 WDR7-208ENST00000589935 544 ntTSL 4 BASIC12.62□□□□□ -0.39
CLDN20P56880 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC12.62□□□□□ -0.39
CLDN20P56880 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC12.62□□□□□ -0.39
CLDN20P56880 AC242376.2-201ENST00000619355 883 ntBASIC12.62□□□□□ -0.39
CLDN20P56880 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC12.62□□□□□ -0.39
CLDN20P56880 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC12.62□□□□□ -0.39
CLDN20P56880 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC12.62□□□□□ -0.39
CLDN20P56880 NOX5-202ENST00000388866 2804 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms