Protein–RNA interactions for Protein: P01891

HLA-A, HLA class I histocompatibility antigen, A-68 alpha chain, humanhuman

Known RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-AP01891 MCM7-213ENST00000621318 3084 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
HLA-AP01891 AL354861.3-201ENST00000600140 2412 ntBASIC11.65□□□□□ -0.54
HLA-AP01891 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC11.65□□□□□ -0.54
HLA-AP01891 FAM184A-211ENST00000521531 3244 ntTSL 5 BASIC11.65□□□□□ -0.54
HLA-AP01891 AGAP3-205ENST00000463381 2730 ntTSL 2 BASIC11.65□□□□□ -0.54
HLA-AP01891 LRTM2-201ENST00000299194 3688 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
HLA-AP01891 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
HLA-AP01891 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
HLA-AP01891 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
HLA-AP01891 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
HLA-AP01891 PGF-202ENST00000405431 666 ntTSL 5 BASIC11.65□□□□□ -0.54
HLA-AP01891 CD8B2-202ENST00000417670 633 ntBASIC11.65□□□□□ -0.54
HLA-AP01891 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
HLA-AP01891 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC11.65□□□□□ -0.54
HLA-AP01891 ST13P19-201ENST00000442505 1124 ntBASIC11.65□□□□□ -0.54
HLA-AP01891 AL355864.2-201ENST00000447420 863 ntBASIC11.65□□□□□ -0.54
HLA-AP01891 OAZ3-203ENST00000453029 729 ntTSL 5 BASIC11.65□□□□□ -0.54
HLA-AP01891 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC11.65□□□□□ -0.54
HLA-AP01891 HOXB-AS3-209ENST00000477144 743 ntTSL 5 BASIC11.65□□□□□ -0.54
HLA-AP01891 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
HLA-AP01891 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC11.65□□□□□ -0.54
HLA-AP01891 SLC25A47P1-201ENST00000531577 414 ntBASIC11.65□□□□□ -0.54
HLA-AP01891 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC11.65□□□□□ -0.54
HLA-AP01891 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
HLA-AP01891 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC11.65□□□□□ -0.54
HLA-AP01891 AP001462.1-201ENST00000594089 452 ntBASIC11.65□□□□□ -0.54
HLA-AP01891 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC11.65□□□□□ -0.54
HLA-AP01891 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC11.65□□□□□ -0.54
HLA-AP01891 AC090386.2-201ENST00000623010 1039 ntBASIC11.65□□□□□ -0.54
HLA-AP01891 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC11.65□□□□□ -0.54
HLA-AP01891 SMG7-214ENST00000508461 3985 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.54
HLA-AP01891 C12orf56-201ENST00000333722 3936 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
HLA-AP01891 PPP1R12B-214ENST00000491336 2046 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
HLA-AP01891 VAMP1-201ENST00000361716 3449 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
HLA-AP01891 CSPG4P13-202ENST00000567704 4801 ntBASIC11.65□□□□□ -0.54
HLA-AP01891 DHRS7B-202ENST00000395511 2175 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
HLA-AP01891 CLCN4-203ENST00000421085 6534 ntTSL 5 BASIC11.65□□□□□ -0.54
HLA-AP01891 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
HLA-AP01891 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC11.65□□□□□ -0.55
HLA-AP01891 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC11.65□□□□□ -0.55
HLA-AP01891 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
HLA-AP01891 DNAH10OS-201ENST00000514254 5040 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.55
HLA-AP01891 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC11.65□□□□□ -0.55
HLA-AP01891 ABLIM3-203ENST00000356541 2290 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
HLA-AP01891 ABLIM3-211ENST00000517451 2287 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
HLA-AP01891 PID1-202ENST00000392054 2745 ntTSL 2 BASIC11.65□□□□□ -0.55
HLA-AP01891 OCA2-202ENST00000354638 3186 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.55
HLA-AP01891 SEC31A-202ENST00000311785 3909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
HLA-AP01891 MYBPC3-204ENST00000545968 4226 ntAPPRIS P2 TSL 5 BASIC11.65□□□□□ -0.55
HLA-AP01891 GRHL2-201ENST00000251808 5239 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
HLA-AP01891 ZNF106-205ENST00000565611 5081 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
HLA-AP01891 KDM2B-219ENST00000611216 3434 ntTSL 5 BASIC11.64□□□□□ -0.55
HLA-AP01891 SLC26A8-202ENST00000394602 3144 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
HLA-AP01891 ALDH9A1-201ENST00000354775 2696 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
HLA-AP01891 MAP2-201ENST00000199940 2241 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
HLA-AP01891 AC091181.1-201ENST00000623762 2098 ntBASIC11.64□□□□□ -0.55
HLA-AP01891 CPLX4-202ENST00000587244 1916 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
HLA-AP01891 HMGCS1-201ENST00000325110 3506 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
HLA-AP01891 CU639417.6-202ENST00000624872 3241 ntTSL 5 BASIC11.64□□□□□ -0.55
HLA-AP01891 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC11.64□□□□□ -0.55
HLA-AP01891 PLOD3-201ENST00000223127 2920 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
HLA-AP01891 CENPP-203ENST00000375587 8766 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
HLA-AP01891 SUCO-209ENST00000610051 2925 ntTSL 2 BASIC11.64□□□□□ -0.55
HLA-AP01891 CARHSP1-218ENST00000614449 2931 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
HLA-AP01891 CPT1C-204ENST00000405931 2785 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
HLA-AP01891 WDR60-202ENST00000407559 3769 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
HLA-AP01891 SNX14-201ENST00000314673 3486 ntAPPRIS P4 TSL 1 (best) BASIC11.64□□□□□ -0.55
HLA-AP01891 ZNF384-204ENST00000396801 3008 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
HLA-AP01891 PDE12-201ENST00000311180 8773 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
HLA-AP01891 FAS-202ENST00000352159 1722 ntTSL 5 BASIC11.64□□□□□ -0.55
HLA-AP01891 AL135960.1-201ENST00000422216 4036 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
HLA-AP01891 PDE1B-203ENST00000538346 1711 ntTSL 2 BASIC11.64□□□□□ -0.55
HLA-AP01891 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC11.64□□□□□ -0.55
HLA-AP01891 EFR3B-205ENST00000405108 2432 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
HLA-AP01891 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
HLA-AP01891 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC11.64□□□□□ -0.55
HLA-AP01891 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
HLA-AP01891 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
HLA-AP01891 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
HLA-AP01891 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
HLA-AP01891 COPE-202ENST00000349893 948 ntTSL 2 BASIC11.64□□□□□ -0.55
HLA-AP01891 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
HLA-AP01891 SKA2-202ENST00000437036 625 ntTSL 2 BASIC11.64□□□□□ -0.55
HLA-AP01891 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC11.64□□□□□ -0.55
HLA-AP01891 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC11.64□□□□□ -0.55
HLA-AP01891 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
HLA-AP01891 GNPDA1-210ENST00000508177 2980 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
HLA-AP01891 AP001889.1-201ENST00000525414 633 ntBASIC11.64□□□□□ -0.55
HLA-AP01891 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
HLA-AP01891 FUZ-207ENST00000526575 482 ntTSL 4 BASIC11.64□□□□□ -0.55
HLA-AP01891 RBM7-207ENST00000544582 692 ntTSL 3 BASIC11.64□□□□□ -0.55
HLA-AP01891 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC11.64□□□□□ -0.55
HLA-AP01891 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
HLA-AP01891 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC11.64□□□□□ -0.55
HLA-AP01891 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC11.64□□□□□ -0.55
HLA-AP01891 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC11.64□□□□□ -0.55
HLA-AP01891 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
HLA-AP01891 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC11.64□□□□□ -0.55
HLA-AP01891 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC11.64□□□□□ -0.55
HLA-AP01891 SLC6A1-201ENST00000287766 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms