Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LRCH3Q96II8 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LRCH3Q96II8 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRCH3Q96II8 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRCH3Q96II8 DRD2-204ENST00000538967 1493 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
LRCH3Q96II8 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LRCH3Q96II8 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC14.82□□□□□ -0.04
LRCH3Q96II8 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC14.82□□□□□ -0.04
LRCH3Q96II8 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.81□□□□□ -0.04
LRCH3Q96II8 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRCH3Q96II8 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LRCH3Q96II8 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
LRCH3Q96II8 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC14.81□□□□□ -0.04
LRCH3Q96II8 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRCH3Q96II8 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRCH3Q96II8 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
LRCH3Q96II8 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRCH3Q96II8 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRCH3Q96II8 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRCH3Q96II8 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRCH3Q96II8 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRCH3Q96II8 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
LRCH3Q96II8 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
LRCH3Q96II8 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.81□□□□□ -0.04
LRCH3Q96II8 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRCH3Q96II8 CRYGD-201ENST00000264376 619 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRCH3Q96II8 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LRCH3Q96II8 BTF3-202ENST00000380591 1237 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LRCH3Q96II8 MB-204ENST00000401702 1043 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LRCH3Q96II8 HNRNPA1P3-201ENST00000440968 551 ntBASIC14.81□□□□□ -0.04
LRCH3Q96II8 AP005273.1-201ENST00000444862 522 ntTSL 3 BASIC14.81□□□□□ -0.04
LRCH3Q96II8 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC14.81□□□□□ -0.04
LRCH3Q96II8 AC015818.1-201ENST00000451011 244 ntBASIC14.81□□□□□ -0.04
LRCH3Q96II8 EEF1GP1-201ENST00000457231 1299 ntBASIC14.81□□□□□ -0.04
LRCH3Q96II8 AC092905.1-201ENST00000467527 949 ntBASIC14.81□□□□□ -0.04
LRCH3Q96II8 HOXB-AS3-209ENST00000477144 743 ntTSL 5 BASIC14.81□□□□□ -0.04
LRCH3Q96II8 RN7SL47P-201ENST00000488710 299 ntBASIC14.81□□□□□ -0.04
LRCH3Q96II8 USP9YP2-201ENST00000504503 1000 ntBASIC14.81□□□□□ -0.04
LRCH3Q96II8 USP9YP1-201ENST00000513521 1002 ntBASIC14.81□□□□□ -0.04
LRCH3Q96II8 AC105424.1-201ENST00000514583 209 ntBASIC14.81□□□□□ -0.04
LRCH3Q96II8 COX14-204ENST00000550654 580 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
LRCH3Q96II8 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC14.81□□□□□ -0.04
LRCH3Q96II8 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LRCH3Q96II8 AC008982.1-201ENST00000594769 963 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
LRCH3Q96II8 AC008894.2-202ENST00000599676 1027 ntTSL 3 BASIC14.81□□□□□ -0.04
LRCH3Q96II8 AC018695.2-201ENST00000602789 498 ntTSL 5 BASIC14.81□□□□□ -0.04
LRCH3Q96II8 MIR6871-201ENST00000613433 56 ntBASIC14.81□□□□□ -0.04
LRCH3Q96II8 AL158032.2-201ENST00000616818 195 ntBASIC14.81□□□□□ -0.04
LRCH3Q96II8 AC087821.1-201ENST00000623639 567 ntBASIC14.81□□□□□ -0.04
LRCH3Q96II8 TRPC5OS-203ENST00000635763 955 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
LRCH3Q96II8 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRCH3Q96II8 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
LRCH3Q96II8 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LRCH3Q96II8 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRCH3Q96II8 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LRCH3Q96II8 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRCH3Q96II8 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRCH3Q96II8 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.81□□□□□ -0.04
LRCH3Q96II8 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LRCH3Q96II8 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.81□□□□□ -0.04
LRCH3Q96II8 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LRCH3Q96II8 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.81□□□□□ -0.04
LRCH3Q96II8 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRCH3Q96II8 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
LRCH3Q96II8 IMPDH1P5-201ENST00000439688 1540 ntBASIC14.81□□□□□ -0.04
LRCH3Q96II8 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRCH3Q96II8 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LRCH3Q96II8 SARS-202ENST00000369923 1882 ntTSL 5 BASIC14.8□□□□□ -0.04
LRCH3Q96II8 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LRCH3Q96II8 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
LRCH3Q96II8 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LRCH3Q96II8 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
LRCH3Q96II8 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
LRCH3Q96II8 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.8□□□□□ -0.04
LRCH3Q96II8 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LRCH3Q96II8 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
LRCH3Q96II8 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
LRCH3Q96II8 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
LRCH3Q96II8 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.8□□□□□ -0.04
LRCH3Q96II8 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LRCH3Q96II8 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LRCH3Q96II8 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LRCH3Q96II8 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.8□□□□□ -0.04
LRCH3Q96II8 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC14.8□□□□□ -0.04
LRCH3Q96II8 PDZD11-201ENST00000239666 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LRCH3Q96II8 AC064853.1-201ENST00000413096 540 ntTSL 4 BASIC14.8□□□□□ -0.04
LRCH3Q96II8 AC013470.3-201ENST00000420252 1194 ntBASIC14.8□□□□□ -0.04
LRCH3Q96II8 TMEM256P1-201ENST00000430550 340 ntBASIC14.8□□□□□ -0.04
LRCH3Q96II8 ZBTB46-AS1-201ENST00000435912 533 ntTSL 3 BASIC14.8□□□□□ -0.04
LRCH3Q96II8 TCEA3-204ENST00000461794 713 ntTSL 3 BASIC14.8□□□□□ -0.04
LRCH3Q96II8 FAM153C-208ENST00000511189 926 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
LRCH3Q96II8 AP002495.1-205ENST00000529513 655 ntAPPRIS ALT2 TSL 3 BASIC14.8□□□□□ -0.04
LRCH3Q96II8 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC14.8□□□□□ -0.04
LRCH3Q96II8 AP003170.2-201ENST00000544730 786 ntBASIC14.8□□□□□ -0.04
LRCH3Q96II8 AC090515.5-201ENST00000560378 526 ntTSL 5 BASIC14.8□□□□□ -0.04
LRCH3Q96II8 HERC2P5-202ENST00000564458 1164 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LRCH3Q96II8 HERC2P8-203ENST00000564795 1164 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LRCH3Q96II8 AC032044.1-201ENST00000570924 570 ntTSL 4 BASIC14.8□□□□□ -0.04
LRCH3Q96II8 Metazoa_SRP.147-201ENST00000576563 312 ntBASIC14.8□□□□□ -0.04
LRCH3Q96II8 AC093072.1-201ENST00000589196 602 ntTSL 4 BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms