Protein–RNA interactions for Protein: P26368

U2AF2, Splicing factor U2AF 65 kDa subunit, humanhuman

Known RBP eCLIP

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF2P26368 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.452e-8■□□□□ 10.6
U2AF2P26368 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.44□□□□□ -1.862e-8■□□□□ 10.6
U2AF2P26368 XRN1-210ENST00000472697 2652 ntTSL 22.22□□□□□ -2.052e-8■□□□□ 10.6
U2AF2P26368 XRN1-214ENST00000498077 5600 ntTSL 51.09□□□□□ -2.242e-8■□□□□ 10.6
U2AF2P26368 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.325e-8■□□□□ 10.6
U2AF2P26368 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.395e-8■□□□□ 10.6
U2AF2P26368 PUS10-206ENST00000602599 6366 ntTSL 1 (best)5.06□□□□□ -1.65e-8■□□□□ 10.6
U2AF2P26368 QRICH1-205ENST00000430979 583 ntTSL 430.51■■■□□ 2.471e-6■□□□□ 10.6
U2AF2P26368 QRICH1-206ENST00000437939 510 ntTSL 528.88■■■□□ 2.211e-6■□□□□ 10.6
U2AF2P26368 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.981e-6■□□□□ 10.6
U2AF2P26368 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC27.18■■□□□ 1.941e-6■□□□□ 10.6
U2AF2P26368 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC27.13■■□□□ 1.931e-6■□□□□ 10.6
U2AF2P26368 ERBB2-209ENST00000578709 559 ntTSL 426.91■■□□□ 1.91e-6■□□□□ 10.6
U2AF2P26368 TFDP1-203ENST00000453989 792 ntTSL 326.73■■□□□ 1.871e-6■□□□□ 10.6
U2AF2P26368 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC25.94■■□□□ 1.741e-6■□□□□ 10.6
U2AF2P26368 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.746e-7■□□□□ 10.6
U2AF2P26368 SH3YL1-216ENST00000471948 2119 ntTSL 225.42■■□□□ 1.661e-8■□□□□ 10.6
U2AF2P26368 DHRSX-207ENST00000478825 679 ntTSL 225.37■■□□□ 1.651e-9■□□□□ 10.6
U2AF2P26368 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.621e-6■□□□□ 10.6
U2AF2P26368 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.611e-8■□□□□ 10.6
U2AF2P26368 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC25.02■■□□□ 1.66e-7■□□□□ 10.6
U2AF2P26368 TFDP1-202ENST00000408980 866 ntTSL 524.98■■□□□ 1.591e-6■□□□□ 10.6
U2AF2P26368 CMPK1-202ENST00000371871 1212 ntTSL 224.95■■□□□ 1.581e-6■□□□□ 10.6
U2AF2P26368 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC24.27■■□□□ 1.481e-9■□□□□ 10.6
U2AF2P26368 DHRSX-203ENST00000430536 490 ntTSL 223.05■■□□□ 1.281e-9■□□□□ 10.6
U2AF2P26368 DHRSX-202ENST00000412516 744 ntTSL 222.61■■□□□ 1.211e-9■□□□□ 10.6
U2AF2P26368 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.121e-9■□□□□ 10.6
U2AF2P26368 TFDP1-206ENST00000475254 804 ntTSL 321.01■□□□□ 0.951e-6■□□□□ 10.6
U2AF2P26368 IREB2-209ENST00000560454 545 ntTSL 520.79■□□□□ 0.921e-6■□□□□ 10.6
U2AF2P26368 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.921e-6■□□□□ 10.6
U2AF2P26368 FBXO22-207ENST00000569022 2164 ntTSL 1 (best)20.4■□□□□ 0.861e-6■□□□□ 10.6
U2AF2P26368 CMPK1-201ENST00000371870 812 ntTSL 220.39■□□□□ 0.851e-6■□□□□ 10.6
U2AF2P26368 TPR-209ENST00000613151 2478 ntTSL 5 BASIC20.33■□□□□ 0.841e-6■□□□□ 10.6
U2AF2P26368 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC20.32■□□□□ 0.841e-6■□□□□ 10.6
U2AF2P26368 ERBB2-211ENST00000582648 1013 ntTSL 520.19■□□□□ 0.821e-6■□□□□ 10.6
U2AF2P26368 ERBB2-212ENST00000582788 2004 ntTSL 519.88■□□□□ 0.771e-6■□□□□ 10.6
U2AF2P26368 MTERF4-221ENST00000496878 2269 ntTSL 219.76■□□□□ 0.751e-6■□□□□ 10.6
U2AF2P26368 EPHX2-211ENST00000523326 557 ntTSL 219.67■□□□□ 0.741e-6■□□□□ 10.6
U2AF2P26368 FBXO22-205ENST00000565036 725 ntTSL 519.58■□□□□ 0.721e-6■□□□□ 10.6
U2AF2P26368 TPR-205ENST00000474852 2757 ntTSL 1 (best)19.4■□□□□ 0.71e-6■□□□□ 10.6
U2AF2P26368 DHRSX-205ENST00000444280 797 ntTSL 219.31■□□□□ 0.681e-9■□□□□ 10.6
U2AF2P26368 PXMP2-203ENST00000454379 537 ntTSL 319.25■□□□□ 0.671e-6■□□□□ 10.6
U2AF2P26368 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC19.25■□□□□ 0.671e-6■□□□□ 10.6
U2AF2P26368 CNOT9-204ENST00000432877 581 ntTSL 319.15■□□□□ 0.661e-6■□□□□ 10.6
U2AF2P26368 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.652e-6■□□□□ 10.6
U2AF2P26368 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.631e-6■□□□□ 10.6
U2AF2P26368 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC18.9■□□□□ 0.621e-6■□□□□ 10.6
U2AF2P26368 ATM-213ENST00000527891 595 ntTSL 318.9■□□□□ 0.621e-8■□□□□ 10.6
U2AF2P26368 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC18.86■□□□□ 0.611e-7■□□□□ 10.6
U2AF2P26368 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC18.57■□□□□ 0.561e-6■□□□□ 10.6
U2AF2P26368 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC18.54■□□□□ 0.562e-8■□□□□ 10.6
U2AF2P26368 FBXO22-209ENST00000569749 1496 ntTSL 1 (best)18.43■□□□□ 0.541e-6■□□□□ 10.6
U2AF2P26368 ERBB2-222ENST00000584908 1316 ntTSL 1 (best)18.34■□□□□ 0.531e-6■□□□□ 10.6
U2AF2P26368 FAM98A-205ENST00000474985 3546 ntTSL 218.22■□□□□ 0.511e-9■□□□□ 10.6
U2AF2P26368 SH3YL1-224ENST00000488044 672 ntTSL 418.16■□□□□ 0.51e-8■□□□□ 10.6
U2AF2P26368 HADH-212ENST00000638621 741 ntTSL 5 BASIC18.16■□□□□ 0.51e-6■□□□□ 10.6
U2AF2P26368 PXMP2-202ENST00000428960 762 ntTSL 318.15■□□□□ 0.51e-6■□□□□ 10.6
U2AF2P26368 RBBP6-210ENST00000568015 695 ntTSL 318.13■□□□□ 0.491e-6■□□□□ 10.6
U2AF2P26368 LEPROTL1-206ENST00000520682 580 ntTSL 518.04■□□□□ 0.481e-6■□□□□ 10.6
U2AF2P26368 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC17.99■□□□□ 0.471e-6■□□□□ 10.6
U2AF2P26368 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.421e-6■□□□□ 10.6
U2AF2P26368 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC17.6■□□□□ 0.411e-6■□□□□ 10.6
U2AF2P26368 CNOT9-205ENST00000433439 567 ntTSL 417.47■□□□□ 0.391e-6■□□□□ 10.6
U2AF2P26368 HADH-220ENST00000640060 1895 ntTSL 517.34■□□□□ 0.371e-6■□□□□ 10.6
U2AF2P26368 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.311e-6■□□□□ 10.6
U2AF2P26368 PXMP2-204ENST00000539093 516 ntTSL 316.96■□□□□ 0.311e-6■□□□□ 10.6
U2AF2P26368 EPHX2-208ENST00000521684 935 ntTSL 316.92■□□□□ 0.31e-6■□□□□ 10.6
U2AF2P26368 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.31e-9■□□□□ 10.6
U2AF2P26368 HADH-202ENST00000403312 1752 ntTSL 5 BASIC16.56■□□□□ 0.241e-6■□□□□ 10.6
U2AF2P26368 HADH-221ENST00000640201 1972 ntTSL 516.37■□□□□ 0.211e-6■□□□□ 10.6
U2AF2P26368 HADH-211ENST00000638559 1369 ntTSL 516.25■□□□□ 0.191e-6■□□□□ 10.6
U2AF2P26368 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.191e-6■□□□□ 10.6
U2AF2P26368 ANKRD11-206ENST00000562275 2762 ntTSL 516.15■□□□□ 0.181e-6■□□□□ 10.6
U2AF2P26368 HADH-216ENST00000639335 1327 ntTSL 516.02■□□□□ 0.161e-6■□□□□ 10.6
U2AF2P26368 NOP58-202ENST00000426814 655 ntTSL 215.94■□□□□ 0.141e-6■□□□□ 10.6
U2AF2P26368 QRICH1-204ENST00000424300 3009 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.061e-6■□□□□ 10.6
U2AF2P26368 ERBB2-202ENST00000406381 4564 ntTSL 5 BASIC15.05■□□□□ -01e-6■□□□□ 10.6
U2AF2P26368 TFDP1-205ENST00000465174 955 ntTSL 314.87□□□□□ -0.031e-6■□□□□ 10.6
U2AF2P26368 ERBB2-203ENST00000445658 3238 ntTSL 2 BASIC14.82□□□□□ -0.041e-6■□□□□ 10.6
U2AF2P26368 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC14.81□□□□□ -0.041e-6■□□□□ 10.6
U2AF2P26368 PARD6B-201ENST00000371610 4615 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.051e-9■□□□□ 10.6
U2AF2P26368 HADH-210ENST00000626637 1774 ntTSL 2 BASIC14.69□□□□□ -0.061e-6■□□□□ 10.6
U2AF2P26368 CMPK1-204ENST00000450808 950 ntTSL 2 BASIC14.58□□□□□ -0.081e-6■□□□□ 10.6
U2AF2P26368 HADH-215ENST00000639146 1964 ntTSL 514.51□□□□□ -0.091e-6■□□□□ 10.6
U2AF2P26368 ERBB2-217ENST00000584099 583 ntTSL 414.39□□□□□ -0.111e-6■□□□□ 10.6
U2AF2P26368 FAM98A-202ENST00000403368 2818 ntTSL 2 BASIC14.26□□□□□ -0.131e-9■□□□□ 10.6
U2AF2P26368 ERBB2-201ENST00000269571 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.141e-6■□□□□ 10.6
U2AF2P26368 ANP32B-201ENST00000339399 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.141e-6■□□□□ 10.6
U2AF2P26368 ATM-219ENST00000532931 481 ntTSL 314.16□□□□□ -0.141e-8■□□□□ 10.6
U2AF2P26368 MTERF4-211ENST00000455202 2626 ntTSL 214.03□□□□□ -0.161e-6■□□□□ 10.6
U2AF2P26368 ERBB2-219ENST00000584601 4792 ntTSL 2 BASIC14.01□□□□□ -0.171e-6■□□□□ 10.6
U2AF2P26368 MTERF4-213ENST00000464344 3993 ntTSL 313.97□□□□□ -0.171e-6■□□□□ 10.6
U2AF2P26368 SH3YL1-220ENST00000475027 599 ntTSL 513.96□□□□□ -0.171e-8■□□□□ 10.6
U2AF2P26368 ERBB2-206ENST00000578373 4523 ntTSL 1 (best)13.87□□□□□ -0.191e-6■□□□□ 10.6
U2AF2P26368 ANP32B-202ENST00000473205 687 ntTSL 313.84□□□□□ -0.191e-6■□□□□ 10.6
U2AF2P26368 ERBB2-218ENST00000584450 3730 ntTSL 1 (best) BASIC13.65□□□□□ -0.221e-6■□□□□ 10.6
U2AF2P26368 SH3YL1-226ENST00000497051 533 ntTSL 513.41□□□□□ -0.261e-8■□□□□ 10.6
U2AF2P26368 ERBB2-204ENST00000541774 4341 ntTSL 5 BASIC13.26□□□□□ -0.291e-6■□□□□ 10.6
U2AF2P26368 HADH-223ENST00000640752 5948 ntTSL 513.18□□□□□ -0.31e-6■□□□□ 10.6
U2AF2P26368 SH3YL1-210ENST00000454318 581 ntTSL 313.15□□□□□ -0.31e-8■□□□□ 10.6
Retrieved 100 of 36,523 protein–RNA pairs in 266.3 ms