RNA–Protein interactions for RNA: ENST00000640201.1

HADH-221, Transcript of hydroxyacyl-CoA dehydrogenase, humanhuman

TSL 5

Gene HADH, Length 1,972 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HADH-221ENST00000640201 NISCHQ9Y2I1 1504 aa28.11■■■□□ 2.09
HADH-221ENST00000640201 SHROOM4Q9ULL8 1493 aa23.92■■□□□ 1.42
HADH-221ENST00000640201 ZCCHC6Q5VYS8 1495 aaKnown RBP23.86■■□□□ 1.41
HADH-221ENST00000640201 CCDC180Q9P1Z9 1646 aa23.81■■□□□ 1.4
HADH-221ENST00000640201 SUPT5HO00267 1087 aaKnown RBP23.64■■□□□ 1.38
HADH-221ENST00000640201 CHIC1Q5VXU3 224 aa23.32■■□□□ 1.32
HADH-221ENST00000640201 MYO15BQ96JP2 1530 aa23.29■■□□□ 1.32
HADH-221ENST00000640201 DCAF1Q9Y4B6 1507 aa23.19■■□□□ 1.3
HADH-221ENST00000640201 HRCP23327 699 aa23.18■■□□□ 1.3
HADH-221ENST00000640201 DCAF8L2P0C7V8 631 aa22.88■■□□□ 1.25
HADH-221ENST00000640201 PCGF6Q9BYE7 350 aa22.8■■□□□ 1.24
HADH-221ENST00000640201 ABCC9O60706 1549 aa22.57■■□□□ 1.2
HADH-221ENST00000640201 LOC105371045A0A1W2PR82 267 aa22.53■■□□□ 1.2
HADH-221ENST00000640201 PPARGC1BQ86YN6 1023 aaKnown RBP22.48■■□□□ 1.19
HADH-221ENST00000640201 TRIM26Q12899 539 aaPredicted RBP22.43■■□□□ 1.18
HADH-221ENST00000640201 RSF1Q96T23 1441 aaPredicted RBP22.35■■□□□ 1.17
HADH-221ENST00000640201 RB1CC1Q8TDY2 1594 aa22.2■■□□□ 1.14
HADH-221ENST00000640201 SCRIBQ14160 1630 aa22.19■■□□□ 1.14
HADH-221ENST00000640201 ZEB1P37275 1124 aaPredicted RBP22.15■■□□□ 1.14
HADH-221ENST00000640201 TRIM41Q8WV44 630 aa22.08■■□□□ 1.13
HADH-221ENST00000640201 NACADO15069 1562 aa21.91■■□□□ 1.1
HADH-221ENST00000640201 CECR2Q9BXF3 1484 aa21.82■■□□□ 1.08
HADH-221ENST00000640201 MROH2BQ7Z745 1585 aa21.82■■□□□ 1.08
HADH-221ENST00000640201 FAM9AQ8IZU1 332 aaPredicted RBP21.78■■□□□ 1.08
HADH-221ENST00000640201 WIZO95785 1651 aa21.71■■□□□ 1.07
HADH-221ENST00000640201 EIF4G1Q04637 1599 aaKnown RBP21.68■■□□□ 1.06
HADH-221ENST00000640201 BAZ1AQ9NRL2 1556 aaPredicted RBP21.67■■□□□ 1.06
HADH-221ENST00000640201 PELP1Q8IZL8 1130 aaKnown RBP21.6■■□□□ 1.05
HADH-221ENST00000640201 SCAF1Q9H7N4 1312 aaKnown RBP21.51■■□□□ 1.03
HADH-221ENST00000640201 WRNQ14191 1432 aaPredicted RBP eCLIP21.46■■□□□ 1.03
HADH-221ENST00000640201 EHMT2Q96KQ7 1210 aa21.46■■□□□ 1.03
HADH-221ENST00000640201 TOP2AP11388 1531 aaKnown RBP21.43■■□□□ 1.02
HADH-221ENST00000640201 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.33■■□□□ 1.01
HADH-221ENST00000640201 SMARCA4P51532 1647 aa21.32■■□□□ 1
HADH-221ENST00000640201 SMARCA2P51531 1590 aa21.32■■□□□ 1
HADH-221ENST00000640201 CCER1Q8TC90 406 aaPredicted RBP21.32■■□□□ 1
HADH-221ENST00000640201 CCDC88BA6NC98 1476 aa21.31■■□□□ 1
HADH-221ENST00000640201 ABCC8Q09428 1581 aa21.29■■□□□ 1
HADH-221ENST00000640201 TNIKQ9UKE5 1360 aa21.28■■□□□ 1
HADH-221ENST00000640201 EEA1Q15075 1411 aa21.26■□□□□ 0.99
HADH-221ENST00000640201 CEP162Q5TB80 1403 aa21.26■□□□□ 0.99
HADH-221ENST00000640201 ACIN1Q9UKV3 1341 aaKnown RBP21.24■□□□□ 0.99
HADH-221ENST00000640201 SOGA1O94964 1423 aa21.18■□□□□ 0.98
HADH-221ENST00000640201 DIEXFQ68CQ4 756 aaKnown RBP21.14■□□□□ 0.98
HADH-221ENST00000640201 UNC13AQ9UPW8 1703 aa21.12■□□□□ 0.97
HADH-221ENST00000640201 NEUROD1Q13562 356 aa21.12■□□□□ 0.97
HADH-221ENST00000640201 CSRNP3Q8WYN3 585 aa21.12■□□□□ 0.97
HADH-221ENST00000640201 GOLGA3Q08378 1498 aa21.06■□□□□ 0.96
HADH-221ENST00000640201 RUSC2Q8N2Y8 1516 aa21.05■□□□□ 0.96
HADH-221ENST00000640201 CENPBP07199 599 aaPredicted RBP21.04■□□□□ 0.96
HADH-221ENST00000640201 PEG3Q9GZU2 1588 aa21■□□□□ 0.95
HADH-221ENST00000640201 KIF21BO75037 1637 aa20.95■□□□□ 0.94
HADH-221ENST00000640201 ZNF316A6NFI3 1004 aaPredicted RBP20.95■□□□□ 0.94
HADH-221ENST00000640201 UBTFP17480 764 aaKnown RBP20.94■□□□□ 0.94
HADH-221ENST00000640201 GTF3C3Q9Y5Q9 886 aa20.92■□□□□ 0.94
HADH-221ENST00000640201 CEP164Q9UPV0 1460 aa20.92■□□□□ 0.94
HADH-221ENST00000640201 TTBK1Q5TCY1 1321 aaPredicted RBP20.88■□□□□ 0.93
HADH-221ENST00000640201 BICRAQ9NZM4 1560 aa20.87■□□□□ 0.93
HADH-221ENST00000640201 SYNJ1O43426 1573 aa20.84■□□□□ 0.93
HADH-221ENST00000640201 BAZ1BQ9UIG0 1483 aaKnown RBP20.83■□□□□ 0.93
HADH-221ENST00000640201 VPS8Q8N3P4 1428 aa20.79■□□□□ 0.92
HADH-221ENST00000640201 CLIP1P30622 1438 aa20.79■□□□□ 0.92
HADH-221ENST00000640201 ATAD2BQ9ULI0 1458 aa20.69■□□□□ 0.9
HADH-221ENST00000640201 RAPGEF2Q9Y4G8 1499 aa20.66■□□□□ 0.9
HADH-221ENST00000640201 HNRNPUL2Q1KMD3 747 aaKnown RBP20.65■□□□□ 0.9
HADH-221ENST00000640201 MYT1Q01538 1121 aa20.64■□□□□ 0.89
HADH-221ENST00000640201 MIER1Q8N108 512 aa20.64■□□□□ 0.89
HADH-221ENST00000640201 PABPN1Q86U42 306 aaKnown RBP eCLIP20.62■□□□□ 0.89
HADH-221ENST00000640201 TOP2BQ02880 1626 aa20.62■□□□□ 0.89
HADH-221ENST00000640201 CLSPNQ9HAW4 1339 aa20.61■□□□□ 0.89
HADH-221ENST00000640201 APLP2Q06481 763 aa20.57■□□□□ 0.88
HADH-221ENST00000640201 BIVM-ERCC5R4GMW8 1640 aa20.56■□□□□ 0.88
HADH-221ENST00000640201 ERICH3Q5RHP9 1530 aa20.56■□□□□ 0.88
HADH-221ENST00000640201 PRXQ9BXM0 1461 aa20.51■□□□□ 0.87
HADH-221ENST00000640201 YTHDC1Q96MU7 727 aaKnown RBP20.5■□□□□ 0.87
HADH-221ENST00000640201 DHX57Q6P158 1386 aaKnown RBP20.47■□□□□ 0.87
HADH-221ENST00000640201 ARAP1Q96P48 1450 aa20.46■□□□□ 0.87
HADH-221ENST00000640201 CUX2O14529 1486 aa20.41■□□□□ 0.86
HADH-221ENST00000640201 RRBP1Q9P2E9 1410 aaKnown RBP20.41■□□□□ 0.86
HADH-221ENST00000640201 KANK4Q5T7N3 995 aaPredicted RBP20.32■□□□□ 0.84
HADH-221ENST00000640201 HMGXB3Q12766 1538 aa20.31■□□□□ 0.84
HADH-221ENST00000640201 CUX1P39880 1505 aa20.3■□□□□ 0.84
HADH-221ENST00000640201 KIF27Q86VH2 1401 aa20.28■□□□□ 0.84
HADH-221ENST00000640201 NCAPD3P42695 1498 aa20.28■□□□□ 0.84
HADH-221ENST00000640201 RANGAP1P46060 587 aaPredicted RBP20.27■□□□□ 0.84
HADH-221ENST00000640201 ARHGAP35Q9NRY4 1499 aa20.22■□□□□ 0.83
HADH-221ENST00000640201 CCNB3Q8WWL7 1395 aa20.22■□□□□ 0.83
HADH-221ENST00000640201 MAP3K1Q13233 1512 aa20.2■□□□□ 0.82
HADH-221ENST00000640201 CFTRP13569 1480 aa20.19■□□□□ 0.82
HADH-221ENST00000640201 SUPT16HQ9Y5B9 1047 aaKnown RBP20.14■□□□□ 0.81
HADH-221ENST00000640201 MAPKBP1O60336 1514 aa20.09■□□□□ 0.81
HADH-221ENST00000640201 TIAM1Q13009 1591 aa20.08■□□□□ 0.81
HADH-221ENST00000640201 PRDM2Q13029 1718 aa20.08■□□□□ 0.8
HADH-221ENST00000640201 RAB3GAP2Q9H2M9 1393 aa20.06■□□□□ 0.8
HADH-221ENST00000640201 IGF1RP08069 1367 aa20.05■□□□□ 0.8
HADH-221ENST00000640201 SETD5Q9C0A6 1442 aa20.01■□□□□ 0.79
HADH-221ENST00000640201 LRRC9Q6ZRR7 1453 aa20■□□□□ 0.79
HADH-221ENST00000640201 TIMELESSQ9UNS1 1208 aa19.95■□□□□ 0.78
HADH-221ENST00000640201 CFAP43Q8NDM7 1665 aa19.94■□□□□ 0.78
HADH-221ENST00000640201 CARMIL1Q5VZK9 1371 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 118.8 ms