RNA–Protein interactions for RNA: ENST00000640060.1

HADH-220, Transcript of hydroxyacyl-CoA dehydrogenase, humanhuman

TSL 5

Gene HADH, Length 1,895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HADH-220ENST00000640060 NISCHQ9Y2I1 1504 aa31.67■■■□□ 2.66
HADH-220ENST00000640060 CCDC180Q9P1Z9 1646 aa27.09■■□□□ 1.93
HADH-220ENST00000640060 ZCCHC6Q5VYS8 1495 aaKnown RBP26.78■■□□□ 1.88
HADH-220ENST00000640060 SHROOM4Q9ULL8 1493 aa26.6■■□□□ 1.85
HADH-220ENST00000640060 DCAF1Q9Y4B6 1507 aa26.12■■□□□ 1.77
HADH-220ENST00000640060 SUPT5HO00267 1087 aaKnown RBP26.02■■□□□ 1.76
HADH-220ENST00000640060 DCAF8L2P0C7V8 631 aa26■■□□□ 1.75
HADH-220ENST00000640060 MYO15BQ96JP2 1530 aa25.46■■□□□ 1.67
HADH-220ENST00000640060 CHIC1Q5VXU3 224 aa25.35■■□□□ 1.65
HADH-220ENST00000640060 ABCC9O60706 1549 aa25.23■■□□□ 1.63
HADH-220ENST00000640060 SCRIBQ14160 1630 aa25.18■■□□□ 1.62
HADH-220ENST00000640060 NACADO15069 1562 aa25.06■■□□□ 1.6
HADH-220ENST00000640060 RSF1Q96T23 1441 aaPredicted RBP24.96■■□□□ 1.59
HADH-220ENST00000640060 RB1CC1Q8TDY2 1594 aa24.69■■□□□ 1.54
HADH-220ENST00000640060 CECR2Q9BXF3 1484 aa24.63■■□□□ 1.53
HADH-220ENST00000640060 MROH2BQ7Z745 1585 aa24.56■■□□□ 1.52
HADH-220ENST00000640060 LOC105371045A0A1W2PR82 267 aa24.49■■□□□ 1.51
HADH-220ENST00000640060 WIZO95785 1651 aa24.4■■□□□ 1.5
HADH-220ENST00000640060 BAZ1AQ9NRL2 1556 aaPredicted RBP24.35■■□□□ 1.49
HADH-220ENST00000640060 TRIM41Q8WV44 630 aa24.34■■□□□ 1.49
HADH-220ENST00000640060 PCGF6Q9BYE7 350 aa24.27■■□□□ 1.48
HADH-220ENST00000640060 HRCP23327 699 aa24.26■■□□□ 1.47
HADH-220ENST00000640060 UNC13AQ9UPW8 1703 aa24.24■■□□□ 1.47
HADH-220ENST00000640060 SMARCA4P51532 1647 aa24.15■■□□□ 1.46
HADH-220ENST00000640060 EIF4G1Q04637 1599 aaKnown RBP24.1■■□□□ 1.45
HADH-220ENST00000640060 TOP2AP11388 1531 aaKnown RBP24.09■■□□□ 1.45
HADH-220ENST00000640060 FAM9AQ8IZU1 332 aaPredicted RBP24■■□□□ 1.43
HADH-220ENST00000640060 BICRAQ9NZM4 1560 aa23.98■■□□□ 1.43
HADH-220ENST00000640060 TRIM26Q12899 539 aaPredicted RBP23.98■■□□□ 1.43
HADH-220ENST00000640060 CCDC88BA6NC98 1476 aa23.94■■□□□ 1.42
HADH-220ENST00000640060 SMARCA2P51531 1590 aa23.93■■□□□ 1.42
HADH-220ENST00000640060 PABPN1Q86U42 306 aaKnown RBP eCLIP23.83■■□□□ 1.4
HADH-220ENST00000640060 PEG3Q9GZU2 1588 aa23.79■■□□□ 1.4
HADH-220ENST00000640060 ABCC8Q09428 1581 aa23.74■■□□□ 1.39
HADH-220ENST00000640060 EHMT2Q96KQ7 1210 aa23.68■■□□□ 1.38
HADH-220ENST00000640060 PPARGC1BQ86YN6 1023 aaKnown RBP23.64■■□□□ 1.37
HADH-220ENST00000640060 ATAD2BQ9ULI0 1458 aa23.56■■□□□ 1.36
HADH-220ENST00000640060 SOGA1O94964 1423 aa23.5■■□□□ 1.35
HADH-220ENST00000640060 EEA1Q15075 1411 aa23.5■■□□□ 1.35
HADH-220ENST00000640060 BAZ1BQ9UIG0 1483 aaKnown RBP23.46■■□□□ 1.35
HADH-220ENST00000640060 WRNQ14191 1432 aaPredicted RBP eCLIP23.44■■□□□ 1.34
HADH-220ENST00000640060 ZEB1P37275 1124 aaPredicted RBP23.41■■□□□ 1.34
HADH-220ENST00000640060 TNIKQ9UKE5 1360 aa23.38■■□□□ 1.33
HADH-220ENST00000640060 CSRNP3Q8WYN3 585 aa23.38■■□□□ 1.33
HADH-220ENST00000640060 RUSC2Q8N2Y8 1516 aa23.38■■□□□ 1.33
HADH-220ENST00000640060 CEP162Q5TB80 1403 aa23.35■■□□□ 1.33
HADH-220ENST00000640060 SYNJ1O43426 1573 aa23.32■■□□□ 1.32
HADH-220ENST00000640060 GOLGA3Q08378 1498 aa23.25■■□□□ 1.31
HADH-220ENST00000640060 HMGXB3Q12766 1538 aa23.18■■□□□ 1.3
HADH-220ENST00000640060 NCAPD3P42695 1498 aa23.18■■□□□ 1.3
HADH-220ENST00000640060 UBTFP17480 764 aaKnown RBP23.17■■□□□ 1.3
HADH-220ENST00000640060 KIF21BO75037 1637 aa23.17■■□□□ 1.3
HADH-220ENST00000640060 CEP164Q9UPV0 1460 aa23.16■■□□□ 1.3
HADH-220ENST00000640060 TOP2BQ02880 1626 aa23.12■■□□□ 1.29
HADH-220ENST00000640060 BIVM-ERCC5R4GMW8 1640 aa23.05■■□□□ 1.28
HADH-220ENST00000640060 DNAJC5BQ9UF47 199 aa22.96■■□□□ 1.27
HADH-220ENST00000640060 RAPGEF2Q9Y4G8 1499 aa22.96■■□□□ 1.27
HADH-220ENST00000640060 CLIP1P30622 1438 aa22.95■■□□□ 1.26
HADH-220ENST00000640060 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.94■■□□□ 1.26
HADH-220ENST00000640060 CFTRP13569 1480 aa22.94■■□□□ 1.26
HADH-220ENST00000640060 TTBK1Q5TCY1 1321 aaPredicted RBP22.9■■□□□ 1.26
HADH-220ENST00000640060 CUX1P39880 1505 aa22.89■■□□□ 1.25
HADH-220ENST00000640060 CCER1Q8TC90 406 aaPredicted RBP22.89■■□□□ 1.25
HADH-220ENST00000640060 VPS8Q8N3P4 1428 aa22.86■■□□□ 1.25
HADH-220ENST00000640060 ERICH3Q5RHP9 1530 aa22.84■■□□□ 1.25
HADH-220ENST00000640060 PRXQ9BXM0 1461 aa22.84■■□□□ 1.25
HADH-220ENST00000640060 PRDM2Q13029 1718 aa22.76■■□□□ 1.23
HADH-220ENST00000640060 KIF27Q86VH2 1401 aa22.74■■□□□ 1.23
HADH-220ENST00000640060 CADPSQ9ULU8 1353 aa22.68■■□□□ 1.22
HADH-220ENST00000640060 APLP2Q06481 763 aa22.64■■□□□ 1.21
HADH-220ENST00000640060 ARAP1Q96P48 1450 aa22.63■■□□□ 1.21
HADH-220ENST00000640060 RANGAP1P46060 587 aaPredicted RBP22.61■■□□□ 1.21
HADH-220ENST00000640060 CC2D2AQ9P2K1 1620 aa22.61■■□□□ 1.21
HADH-220ENST00000640060 IGF1RP08069 1367 aa22.52■■□□□ 1.2
HADH-220ENST00000640060 HNRNPUL2Q1KMD3 747 aaKnown RBP22.51■■□□□ 1.19
HADH-220ENST00000640060 CUX2O14529 1486 aa22.51■■□□□ 1.19
HADH-220ENST00000640060 FGD5Q6ZNL6 1462 aa22.48■■□□□ 1.19
HADH-220ENST00000640060 ARHGAP35Q9NRY4 1499 aa22.46■■□□□ 1.19
HADH-220ENST00000640060 FANCD2Q9BXW9 1451 aa22.43■■□□□ 1.18
HADH-220ENST00000640060 KANK4Q5T7N3 995 aaPredicted RBP22.4■■□□□ 1.18
HADH-220ENST00000640060 CARMIL1Q5VZK9 1371 aa22.39■■□□□ 1.17
HADH-220ENST00000640060 DIEXFQ68CQ4 756 aaKnown RBP22.37■■□□□ 1.17
HADH-220ENST00000640060 DNMBPQ6XZF7 1577 aa22.34■■□□□ 1.17
HADH-220ENST00000640060 RRBP1Q9P2E9 1410 aaKnown RBP22.34■■□□□ 1.17
HADH-220ENST00000640060 ZNF316A6NFI3 1004 aaPredicted RBP22.3■■□□□ 1.16
HADH-220ENST00000640060 ABCA10Q8WWZ4 1543 aa22.29■■□□□ 1.16
HADH-220ENST00000640060 TOPBP1Q92547 1522 aa22.29■■□□□ 1.16
HADH-220ENST00000640060 MAP3K1Q13233 1512 aa22.27■■□□□ 1.16
HADH-220ENST00000640060 POLA1P09884 1462 aaPredicted RBP22.26■■□□□ 1.15
HADH-220ENST00000640060 NESP48681 1621 aa22.26■■□□□ 1.15
HADH-220ENST00000640060 CLSPNQ9HAW4 1339 aa22.24■■□□□ 1.15
HADH-220ENST00000640060 RAD54L2Q9Y4B4 1467 aa22.24■■□□□ 1.15
HADH-220ENST00000640060 LAMC3Q9Y6N6 1575 aa22.21■■□□□ 1.15
HADH-220ENST00000640060 CCNB3Q8WWL7 1395 aa22.2■■□□□ 1.14
HADH-220ENST00000640060 TIAM1Q13009 1591 aa22.2■■□□□ 1.14
HADH-220ENST00000640060 DHX57Q6P158 1386 aaKnown RBP22.19■■□□□ 1.14
HADH-220ENST00000640060 SCAF1Q9H7N4 1312 aaKnown RBP22.16■■□□□ 1.14
HADH-220ENST00000640060 FHAD1B1AJZ9 1412 aa22.15■■□□□ 1.14
HADH-220ENST00000640060 CUL7Q14999 1698 aa22.15■■□□□ 1.14
HADH-220ENST00000640060 URB2Q14146 1524 aaKnown RBP22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 156.6 ms