RNA–Protein interactions for RNA: ENST00000433439.1

CNOT9-205, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 4

Gene CNOT9, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-205ENST00000433439 NISCHQ9Y2I1 1504 aa36.25■■■■□ 3.39
CNOT9-205ENST00000433439 CCDC180Q9P1Z9 1646 aa31.98■■■□□ 2.71
CNOT9-205ENST00000433439 ABCC9O60706 1549 aa31.02■■■□□ 2.56
CNOT9-205ENST00000433439 DCAF8L2P0C7V8 631 aa30.35■■■□□ 2.45
CNOT9-205ENST00000433439 ZCCHC6Q5VYS8 1495 aaKnown RBP30.28■■■□□ 2.44
CNOT9-205ENST00000433439 NACADO15069 1562 aa29.98■■■□□ 2.39
CNOT9-205ENST00000433439 RB1CC1Q8TDY2 1594 aa29.94■■■□□ 2.38
CNOT9-205ENST00000433439 DCAF1Q9Y4B6 1507 aa29.91■■■□□ 2.38
CNOT9-205ENST00000433439 MYO15BQ96JP2 1530 aa29.85■■■□□ 2.37
CNOT9-205ENST00000433439 DNAJC5BQ9UF47 199 aa29.51■■■□□ 2.31
CNOT9-205ENST00000433439 SCRIBQ14160 1630 aa29.35■■■□□ 2.29
CNOT9-205ENST00000433439 UNC13AQ9UPW8 1703 aa29.28■■■□□ 2.28
CNOT9-205ENST00000433439 SHROOM4Q9ULL8 1493 aa29.13■■■□□ 2.25
CNOT9-205ENST00000433439 PABPN1Q86U42 306 aaKnown RBP eCLIP29.11■■■□□ 2.25
CNOT9-205ENST00000433439 BICRAQ9NZM4 1560 aa29■■■□□ 2.23
CNOT9-205ENST00000433439 CECR2Q9BXF3 1484 aa28.25■■■□□ 2.11
CNOT9-205ENST00000433439 EIF4G1Q04637 1599 aaKnown RBP28.21■■■□□ 2.11
CNOT9-205ENST00000433439 BAZ1AQ9NRL2 1556 aaPredicted RBP28.07■■■□□ 2.08
CNOT9-205ENST00000433439 SMARCA4P51532 1647 aa28.05■■■□□ 2.08
CNOT9-205ENST00000433439 CC2D2AQ9P2K1 1620 aa28.02■■■□□ 2.08
CNOT9-205ENST00000433439 MROH2BQ7Z745 1585 aa27.99■■■□□ 2.07
CNOT9-205ENST00000433439 DNAJC5Q9H3Z4 198 aa27.9■■■□□ 2.06
CNOT9-205ENST00000433439 RSF1Q96T23 1441 aaPredicted RBP27.81■■■□□ 2.04
CNOT9-205ENST00000433439 ATAD2BQ9ULI0 1458 aa27.77■■■□□ 2.04
CNOT9-205ENST00000433439 SMARCA2P51531 1590 aa27.75■■■□□ 2.03
CNOT9-205ENST00000433439 WIZO95785 1651 aa27.74■■■□□ 2.03
CNOT9-205ENST00000433439 PEG3Q9GZU2 1588 aa27.68■■■□□ 2.02
CNOT9-205ENST00000433439 NCAPD3P42695 1498 aa27.65■■■□□ 2.02
CNOT9-205ENST00000433439 SUPT5HO00267 1087 aaKnown RBP27.64■■■□□ 2.02
CNOT9-205ENST00000433439 BAZ1BQ9UIG0 1483 aaKnown RBP27.61■■■□□ 2.01
CNOT9-205ENST00000433439 HMGXB3Q12766 1538 aa27.55■■■□□ 2
CNOT9-205ENST00000433439 TOP2AP11388 1531 aaKnown RBP27.41■■□□□ 1.98
CNOT9-205ENST00000433439 CCDC88BA6NC98 1476 aa27.13■■□□□ 1.93
CNOT9-205ENST00000433439 NESP48681 1621 aa26.96■■□□□ 1.91
CNOT9-205ENST00000433439 CADPSQ9ULU8 1353 aa26.92■■□□□ 1.9
CNOT9-205ENST00000433439 LAMC3Q9Y6N6 1575 aa26.87■■□□□ 1.89
CNOT9-205ENST00000433439 CFTRP13569 1480 aa26.81■■□□□ 1.88
CNOT9-205ENST00000433439 PDS5BQ9NTI5 1447 aa26.7■■□□□ 1.86
CNOT9-205ENST00000433439 ERCC6Q03468 1493 aa26.69■■□□□ 1.86
CNOT9-205ENST00000433439 CUX2O14529 1486 aa26.68■■□□□ 1.86
CNOT9-205ENST00000433439 PRDM2Q13029 1718 aa26.65■■□□□ 1.86
CNOT9-205ENST00000433439 FANCD2Q9BXW9 1451 aa26.63■■□□□ 1.85
CNOT9-205ENST00000433439 KIF21AQ7Z4S6 1674 aa26.62■■□□□ 1.85
CNOT9-205ENST00000433439 CEP164Q9UPV0 1460 aa26.55■■□□□ 1.84
CNOT9-205ENST00000433439 MRC2Q9UBG0 1479 aa26.41■■□□□ 1.82
CNOT9-205ENST00000433439 THOC2Q8NI27 1593 aaKnown RBP26.37■■□□□ 1.81
CNOT9-205ENST00000433439 URB2Q14146 1524 aaKnown RBP26.33■■□□□ 1.81
CNOT9-205ENST00000433439 ABCC8Q09428 1581 aa26.33■■□□□ 1.8
CNOT9-205ENST00000433439 WDR62O43379 1518 aa26.27■■□□□ 1.8
CNOT9-205ENST00000433439 TOPBP1Q92547 1522 aa26.25■■□□□ 1.79
CNOT9-205ENST00000433439 WRNQ14191 1432 aaPredicted RBP eCLIP26.24■■□□□ 1.79
CNOT9-205ENST00000433439 DNMBPQ6XZF7 1577 aa26.24■■□□□ 1.79
CNOT9-205ENST00000433439 TRIM41Q8WV44 630 aa26.22■■□□□ 1.79
CNOT9-205ENST00000433439 CUX1P39880 1505 aa26.22■■□□□ 1.79
CNOT9-205ENST00000433439 SYNJ1O43426 1573 aa26.15■■□□□ 1.78
CNOT9-205ENST00000433439 TOP2BQ02880 1626 aa26.09■■□□□ 1.77
CNOT9-205ENST00000433439 FGD5Q6ZNL6 1462 aa26.09■■□□□ 1.77
CNOT9-205ENST00000433439 BIVM-ERCC5R4GMW8 1640 aa26.07■■□□□ 1.76
CNOT9-205ENST00000433439 POLA1P09884 1462 aaPredicted RBP26.05■■□□□ 1.76
CNOT9-205ENST00000433439 RAD54L2Q9Y4B4 1467 aa25.99■■□□□ 1.75
CNOT9-205ENST00000433439 SOGA1O94964 1423 aa25.99■■□□□ 1.75
CNOT9-205ENST00000433439 CHIC1Q5VXU3 224 aa25.97■■□□□ 1.75
CNOT9-205ENST00000433439 IFT140Q96RY7 1462 aa25.95■■□□□ 1.74
CNOT9-205ENST00000433439 TARBP1Q13395 1621 aaKnown RBP25.89■■□□□ 1.74
CNOT9-205ENST00000433439 ZNF608Q9ULD9 1512 aaPredicted RBP25.84■■□□□ 1.73
CNOT9-205ENST00000433439 TDRD9Q8NDG6 1382 aaKnown RBP25.82■■□□□ 1.72
CNOT9-205ENST00000433439 ABCA10Q8WWZ4 1543 aa25.79■■□□□ 1.72
CNOT9-205ENST00000433439 WDR97A6NE52 1622 aa25.78■■□□□ 1.72
CNOT9-205ENST00000433439 AQRO60306 1485 aaKnown RBP eCLIP25.78■■□□□ 1.725e-8■■■■■ 56.9
CNOT9-205ENST00000433439 EIF4G3O43432 1585 aaKnown RBP25.73■■□□□ 1.71
CNOT9-205ENST00000433439 GAPVD1Q14C86 1478 aa25.68■■□□□ 1.7
CNOT9-205ENST00000433439 ABCA5Q8WWZ7 1642 aa25.66■■□□□ 1.7
CNOT9-205ENST00000433439 KIF27Q86VH2 1401 aa25.65■■□□□ 1.7
CNOT9-205ENST00000433439 RUSC2Q8N2Y8 1516 aa25.61■■□□□ 1.69
CNOT9-205ENST00000433439 PBRM1Q86U86 1689 aa25.6■■□□□ 1.69
CNOT9-205ENST00000433439 GRIN2BQ13224 1484 aa25.6■■□□□ 1.69
CNOT9-205ENST00000433439 FAM9AQ8IZU1 332 aaPredicted RBP25.57■■□□□ 1.68
CNOT9-205ENST00000433439 SNAPC4Q5SXM2 1469 aa25.53■■□□□ 1.68
CNOT9-205ENST00000433439 ERICH3Q5RHP9 1530 aa25.48■■□□□ 1.67
CNOT9-205ENST00000433439 FBLN2P98095 1184 aa25.48■■□□□ 1.67
CNOT9-205ENST00000433439 IGF1RP08069 1367 aa25.47■■□□□ 1.67
CNOT9-205ENST00000433439 MAGI1Q96QZ7 1491 aaPredicted RBP25.46■■□□□ 1.67
CNOT9-205ENST00000433439 EEA1Q15075 1411 aa25.42■■□□□ 1.66
CNOT9-205ENST00000433439 CHMP7Q8WUX9 453 aaPredicted RBP25.41■■□□□ 1.66
CNOT9-205ENST00000433439 ADAMTS12P58397 1594 aa25.4■■□□□ 1.66
CNOT9-205ENST00000433439 CSRNP3Q8WYN3 585 aa25.4■■□□□ 1.66
CNOT9-205ENST00000433439 FHAD1B1AJZ9 1412 aa25.38■■□□□ 1.65
CNOT9-205ENST00000433439 CARMIL1Q5VZK9 1371 aa25.37■■□□□ 1.65
CNOT9-205ENST00000433439 CUL7Q14999 1698 aa25.36■■□□□ 1.65
CNOT9-205ENST00000433439 SYNJ2O15056 1496 aa25.36■■□□□ 1.65
CNOT9-205ENST00000433439 CHD1O14646 1710 aa25.35■■□□□ 1.65
CNOT9-205ENST00000433439 EHMT2Q96KQ7 1210 aa25.29■■□□□ 1.64
CNOT9-205ENST00000433439 OSCARQ8IYS5 282 aa25.28■■□□□ 1.64
CNOT9-205ENST00000433439 GRIN2AQ12879 1464 aa25.28■■□□□ 1.64
CNOT9-205ENST00000433439 RAPGEF2Q9Y4G8 1499 aa25.25■■□□□ 1.63
CNOT9-205ENST00000433439 PRXQ9BXM0 1461 aa25.23■■□□□ 1.63
CNOT9-205ENST00000433439 KIF21BO75037 1637 aa25.14■■□□□ 1.61
CNOT9-205ENST00000433439 CEP170Q5SW79 1584 aa25.14■■□□□ 1.61
CNOT9-205ENST00000433439 NUP160Q12769 1436 aa25.1■■□□□ 1.61
CNOT9-205ENST00000433439 RIMBP3CA6NJZ7 1639 aa25.08■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms