RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 AEBP2Q6ZN18 517 aaPredicted RBP9.37□□□□□ -0.91
XRN1-210ENST00000472697 CHIC1Q5VXU3 224 aa8.85□□□□□ -0.99
XRN1-210ENST00000472697 POTEDQ86YR6 584 aa8.4□□□□□ -1.06
XRN1-210ENST00000472697 SENP3Q9H4L4 574 aaPredicted RBP8.02□□□□□ -1.13
XRN1-210ENST00000472697 PHF23Q9BUL5 403 aaPredicted RBP7.88□□□□□ -1.15
XRN1-210ENST00000472697 MSH5O43196 834 aa7.49□□□□□ -1.21
XRN1-210ENST00000472697 FOXD1Q16676 465 aa7.47□□□□□ -1.21
XRN1-210ENST00000472697 EHMT2Q96KQ7 1210 aa7.15□□□□□ -1.26
XRN1-210ENST00000472697 PLPPR3Q6T4P5 718 aa7.04□□□□□ -1.28
XRN1-210ENST00000472697 ADRA2BP18089 450 aa6.99□□□□□ -1.29
XRN1-210ENST00000472697 KCNA4P22459 653 aa6.96□□□□□ -1.29
XRN1-210ENST00000472697 PIAS4Q8N2W9 510 aaPredicted RBP6.92□□□□□ -1.3
XRN1-210ENST00000472697 PPP6R1Q9UPN7 881 aa6.91□□□□□ -1.3
XRN1-210ENST00000472697 CSRNP3Q8WYN3 585 aa6.76□□□□□ -1.33
XRN1-210ENST00000472697 CACNB1Q02641 598 aaPredicted RBP6.69□□□□□ -1.34
XRN1-210ENST00000472697 SLC4A1APQ9BWU0 796 aaKnown RBP6.53□□□□□ -1.36
XRN1-210ENST00000472697 ZBTB22O15209 634 aa6.52□□□□□ -1.37
XRN1-210ENST00000472697 SLC24A1O60721 1099 aa6.5□□□□□ -1.37
XRN1-210ENST00000472697 RTN4Q9NQC3 1192 aaKnown RBP6.49□□□□□ -1.37
XRN1-210ENST00000472697 POTEHQ6S545 545 aa6.45□□□□□ -1.38
XRN1-210ENST00000472697 PPP4R3CPQ6ZMV5 832 aa6.38□□□□□ -1.39
XRN1-210ENST00000472697 DMRT2Q9Y5R5 561 aa6.36□□□□□ -1.39
XRN1-210ENST00000472697 NPM3O75607 178 aaKnown RBP6.33□□□□□ -1.4
XRN1-210ENST00000472697 MAPK8IP2Q13387 824 aaPredicted RBP6.33□□□□□ -1.4
XRN1-210ENST00000472697 SCAF1Q9H7N4 1312 aaKnown RBP6.32□□□□□ -1.4
XRN1-210ENST00000472697 C1QBPQ07021 282 aaKnown RBP6.16□□□□□ -1.42
XRN1-210ENST00000472697 RNF39Q9H2S5 420 aa6.15□□□□□ -1.42
XRN1-210ENST00000472697 HOXD11P31277 338 aaPredicted RBP6.11□□□□□ -1.43
XRN1-210ENST00000472697 AMER1Q5JTC6 1135 aaPredicted RBP6.11□□□□□ -1.43
XRN1-210ENST00000472697 NCBP3Q53F19 620 aaKnown RBP6.09□□□□□ -1.44
XRN1-210ENST00000472697 CNKSR2Q8WXI2 1034 aa6.06□□□□□ -1.44
XRN1-210ENST00000472697 FKBP8Q14318 412 aa6.03□□□□□ -1.44
XRN1-210ENST00000472697 RNF216Q9NWF9 866 aaPredicted RBP6.03□□□□□ -1.44
XRN1-210ENST00000472697 PRKCSHP14314 528 aaPredicted RBP6.02□□□□□ -1.44
XRN1-210ENST00000472697 FOXD4L1Q9NU39 408 aa6.02□□□□□ -1.44
XRN1-210ENST00000472697 DNAJC5BQ9UF47 199 aa6□□□□□ -1.45
XRN1-210ENST00000472697 DCAF8L1A6NGE4 600 aa5.99□□□□□ -1.45
XRN1-210ENST00000472697 SLC4A2P04920 1241 aa5.93□□□□□ -1.46
XRN1-210ENST00000472697 ATF5Q9Y2D1 282 aaPredicted RBP5.84□□□□□ -1.47
XRN1-210ENST00000472697 PLCB2Q00722 1185 aa5.76□□□□□ -1.49
XRN1-210ENST00000472697 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.75□□□□□ -1.493e-7■■■■□ 23.3
XRN1-210ENST00000472697 SP7Q8TDD2 431 aaPredicted RBP5.72□□□□□ -1.49
XRN1-210ENST00000472697 HAP1P54257 671 aaPredicted RBP5.72□□□□□ -1.49
XRN1-210ENST00000472697 TAOK2Q9UL54 1235 aa5.71□□□□□ -1.5
XRN1-210ENST00000472697 FBLN2P98095 1184 aa5.71□□□□□ -1.5
XRN1-210ENST00000472697 KDM2AQ9Y2K7 1162 aa5.69□□□□□ -1.5
XRN1-210ENST00000472697 TPRNQ4KMQ1 711 aa5.67□□□□□ -1.5
XRN1-210ENST00000472697 DCAF8L2P0C7V8 631 aa5.66□□□□□ -1.5
XRN1-210ENST00000472697 U3KPZ7 1027 aaPredicted RBP5.65□□□□□ -1.51
XRN1-210ENST00000472697 MYCNP04198 464 aaPredicted RBP5.63□□□□□ -1.51
XRN1-210ENST00000472697 TIMELESSQ9UNS1 1208 aa5.62□□□□□ -1.51
XRN1-210ENST00000472697 IFNLR1Q8IU57 520 aaPredicted RBP5.6□□□□□ -1.51
XRN1-210ENST00000472697 PKD2Q13563 968 aa5.6□□□□□ -1.51
XRN1-210ENST00000472697 NPM1P06748 294 aaKnown RBP eCLIP5.58□□□□□ -1.52
XRN1-210ENST00000472697 ATXN8OSP0DMR3 200 aa5.58□□□□□ -1.52
XRN1-210ENST00000472697 DSG3P32926 999 aa5.58□□□□□ -1.52
XRN1-210ENST00000472697 BCANQ96GW7 911 aa5.58□□□□□ -1.52
XRN1-210ENST00000472697 SPINK5Q9NQ38 1064 aaPredicted RBP5.56□□□□□ -1.52
XRN1-210ENST00000472697 TULP1O00294 542 aaPredicted RBP5.54□□□□□ -1.52
XRN1-210ENST00000472697 CAPN15O75808 1086 aa5.54□□□□□ -1.52
XRN1-210ENST00000472697 MKRN4PQ13434 485 aaPredicted RBP5.52□□□□□ -1.53
XRN1-210ENST00000472697 APLP2Q06481 763 aa5.51□□□□□ -1.53
XRN1-210ENST00000472697 VASPP50552 380 aaPredicted RBP5.5□□□□□ -1.53
XRN1-210ENST00000472697 TSHZ2Q9NRE2 1034 aa5.5□□□□□ -1.53
XRN1-210ENST00000472697 CFAP44Q96MT7 982 aa5.49□□□□□ -1.53
XRN1-210ENST00000472697 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.48□□□□□ -1.53
XRN1-210ENST00000472697 HNRNPUL2Q1KMD3 747 aaKnown RBP5.48□□□□□ -1.53
XRN1-210ENST00000472697 PAXIP1Q6ZW49 1069 aaPredicted RBP5.48□□□□□ -1.53
XRN1-210ENST00000472697 PLSCR2Q9NRY7 297 aa5.47□□□□□ -1.53
XRN1-210ENST00000472697 ZNF219Q9P2Y4 722 aaPredicted RBP5.46□□□□□ -1.54
XRN1-210ENST00000472697 SPDYE4A6NLX3 237 aa5.46□□□□□ -1.54
XRN1-210ENST00000472697 VSIG10Q8N0Z9 540 aa5.45□□□□□ -1.54
XRN1-210ENST00000472697 RBM42Q9BTD8 480 aaKnown RBP5.45□□□□□ -1.54
XRN1-210ENST00000472697 SAMD1Q6SPF0 538 aaPredicted RBP5.44□□□□□ -1.54
XRN1-210ENST00000472697 RGL2O15211 777 aa5.42□□□□□ -1.54
XRN1-210ENST00000472697 TRHP20396 242 aaPredicted RBP5.42□□□□□ -1.54
XRN1-210ENST00000472697 CHRDL2Q6WN34 429 aa5.41□□□□□ -1.54
XRN1-210ENST00000472697 PROM2Q8N271 834 aa5.39□□□□□ -1.55
XRN1-210ENST00000472697 PCDH10Q9P2E7 1040 aa5.39□□□□□ -1.55
XRN1-210ENST00000472697 ABCB7O75027 752 aa5.39□□□□□ -1.55
XRN1-210ENST00000472697 FBXO3Q9UK99 471 aa5.35□□□□□ -1.55
XRN1-210ENST00000472697 GTF3C3Q9Y5Q9 886 aa5.34□□□□□ -1.55
XRN1-210ENST00000472697 ECM2O94769 699 aaPredicted RBP5.33□□□□□ -1.56
XRN1-210ENST00000472697 LHX8Q68G74 356 aa5.32□□□□□ -1.56
XRN1-210ENST00000472697 BBXQ8WY36 941 aaPredicted RBP5.32□□□□□ -1.56
XRN1-210ENST00000472697 DAXXQ9UER7 740 aaPredicted RBP5.3□□□□□ -1.56
XRN1-210ENST00000472697 CHGAP10645 457 aaKnown RBP5.3□□□□□ -1.56
XRN1-210ENST00000472697 POLA2Q14181 598 aa5.29□□□□□ -1.56
XRN1-210ENST00000472697 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.29□□□□□ -1.56
XRN1-210ENST00000472697 SPRYD3Q8NCJ5 442 aa5.28□□□□□ -1.56
XRN1-210ENST00000472697 KLHL34Q8N239 644 aa5.27□□□□□ -1.57
XRN1-210ENST00000472697 RNF25Q96BH1 459 aaPredicted RBP5.26□□□□□ -1.57
XRN1-210ENST00000472697 NKX1-1Q15270 411 aaPredicted RBP5.26□□□□□ -1.57
XRN1-210ENST00000472697 SUPT5HO00267 1087 aaKnown RBP5.25□□□□□ -1.57
XRN1-210ENST00000472697 TMEM132AQ24JP5 1023 aa5.25□□□□□ -1.57
XRN1-210ENST00000472697 ZBTB12Q9Y330 459 aaPredicted RBP5.22□□□□□ -1.57
XRN1-210ENST00000472697 NBR1Q14596 966 aa5.22□□□□□ -1.57
XRN1-210ENST00000472697 SPOCK2Q92563 424 aa5.21□□□□□ -1.58
XRN1-210ENST00000472697 DNAJC5Q9H3Z4 198 aa5.21□□□□□ -1.58
XRN1-210ENST00000472697 AKT1S1Q96B36 256 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms