Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SHKBP1Q8TBC3 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SHKBP1Q8TBC3 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SHKBP1Q8TBC3 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SHKBP1Q8TBC3 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC14.41□□□□□ -0.1
SHKBP1Q8TBC3 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SHKBP1Q8TBC3 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
SHKBP1Q8TBC3 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
SHKBP1Q8TBC3 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SHKBP1Q8TBC3 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
SHKBP1Q8TBC3 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
SHKBP1Q8TBC3 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SHKBP1Q8TBC3 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
SHKBP1Q8TBC3 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
SHKBP1Q8TBC3 MORN2-201ENST00000340556 741 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SHKBP1Q8TBC3 GEMIN8P4-201ENST00000380526 729 ntBASIC14.41□□□□□ -0.1
SHKBP1Q8TBC3 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SHKBP1Q8TBC3 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC14.41□□□□□ -0.1
SHKBP1Q8TBC3 HLA-DPA2-205ENST00000433582 733 ntBASIC14.41□□□□□ -0.1
SHKBP1Q8TBC3 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC14.41□□□□□ -0.1
SHKBP1Q8TBC3 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC14.41□□□□□ -0.1
SHKBP1Q8TBC3 GDNF-207ENST00000515058 764 ntTSL 5 BASIC14.41□□□□□ -0.1
SHKBP1Q8TBC3 CD44-224ENST00000526669 870 ntTSL 5 BASIC14.41□□□□□ -0.1
SHKBP1Q8TBC3 F11R-204ENST00000537746 1245 ntTSL 2 BASIC14.41□□□□□ -0.1
SHKBP1Q8TBC3 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC14.41□□□□□ -0.1
SHKBP1Q8TBC3 HNRNPA1P5-201ENST00000558213 966 ntBASIC14.41□□□□□ -0.1
SHKBP1Q8TBC3 SRP14-204ENST00000558720 780 ntTSL 2 BASIC14.41□□□□□ -0.1
SHKBP1Q8TBC3 ABHD17AP9-201ENST00000561925 548 ntBASIC14.41□□□□□ -0.1
SHKBP1Q8TBC3 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SHKBP1Q8TBC3 KXD1-211ENST00000599319 707 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
SHKBP1Q8TBC3 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
SHKBP1Q8TBC3 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC14.41□□□□□ -0.1
SHKBP1Q8TBC3 AC026336.4-201ENST00000624565 1050 ntBASIC14.41□□□□□ -0.1
SHKBP1Q8TBC3 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC14.41□□□□□ -0.1
SHKBP1Q8TBC3 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC14.41□□□□□ -0.1
SHKBP1Q8TBC3 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
SHKBP1Q8TBC3 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SHKBP1Q8TBC3 AC093462.1-201ENST00000621167 1683 ntBASIC14.41□□□□□ -0.1
SHKBP1Q8TBC3 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SHKBP1Q8TBC3 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SHKBP1Q8TBC3 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
SHKBP1Q8TBC3 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC14.41□□□□□ -0.1
SHKBP1Q8TBC3 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SHKBP1Q8TBC3 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SHKBP1Q8TBC3 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
SHKBP1Q8TBC3 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SHKBP1Q8TBC3 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC14.41□□□□□ -0.1
SHKBP1Q8TBC3 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
SHKBP1Q8TBC3 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SHKBP1Q8TBC3 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC14.41□□□□□ -0.1
SHKBP1Q8TBC3 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC14.4□□□□□ -0.1
SHKBP1Q8TBC3 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
SHKBP1Q8TBC3 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
SHKBP1Q8TBC3 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
SHKBP1Q8TBC3 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC14.4□□□□□ -0.1
SHKBP1Q8TBC3 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SHKBP1Q8TBC3 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC14.4□□□□□ -0.1
SHKBP1Q8TBC3 SALL4P6-201ENST00000429385 1691 ntBASIC14.4□□□□□ -0.1
SHKBP1Q8TBC3 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SHKBP1Q8TBC3 AC061965.1-201ENST00000560524 1465 ntBASIC14.4□□□□□ -0.1
SHKBP1Q8TBC3 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SHKBP1Q8TBC3 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SHKBP1Q8TBC3 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SHKBP1Q8TBC3 PTGER4P2-201ENST00000328411 252 ntBASIC14.4□□□□□ -0.1
SHKBP1Q8TBC3 AC022080.1-201ENST00000366255 781 ntBASIC14.4□□□□□ -0.1
SHKBP1Q8TBC3 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC14.4□□□□□ -0.1
SHKBP1Q8TBC3 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC14.4□□□□□ -0.1
SHKBP1Q8TBC3 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SHKBP1Q8TBC3 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SHKBP1Q8TBC3 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SHKBP1Q8TBC3 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC14.4□□□□□ -0.1
SHKBP1Q8TBC3 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC14.4□□□□□ -0.1
SHKBP1Q8TBC3 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC14.4□□□□□ -0.1
SHKBP1Q8TBC3 DDX39AP1-201ENST00000445147 1181 ntBASIC14.4□□□□□ -0.1
SHKBP1Q8TBC3 NALT1-202ENST00000450304 437 ntTSL 3 BASIC14.4□□□□□ -0.1
SHKBP1Q8TBC3 PTGER4P3-201ENST00000458150 252 ntBASIC14.4□□□□□ -0.1
SHKBP1Q8TBC3 RN7SL128P-201ENST00000467883 305 ntBASIC14.4□□□□□ -0.1
SHKBP1Q8TBC3 RN7SL288P-201ENST00000490496 291 ntBASIC14.4□□□□□ -0.1
SHKBP1Q8TBC3 CISD2-202ENST00000503643 808 ntTSL 2 BASIC14.4□□□□□ -0.1
SHKBP1Q8TBC3 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
SHKBP1Q8TBC3 AC012158.2-201ENST00000536546 354 ntBASIC14.4□□□□□ -0.1
SHKBP1Q8TBC3 AC068831.5-201ENST00000557387 328 ntBASIC14.4□□□□□ -0.1
SHKBP1Q8TBC3 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC14.4□□□□□ -0.1
SHKBP1Q8TBC3 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC14.4□□□□□ -0.1
SHKBP1Q8TBC3 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC14.4□□□□□ -0.1
SHKBP1Q8TBC3 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC14.4□□□□□ -0.1
SHKBP1Q8TBC3 AC005274.1-201ENST00000623460 802 ntBASIC14.4□□□□□ -0.1
SHKBP1Q8TBC3 RARS-210ENST00000626454 177 ntTSL 5 BASIC14.4□□□□□ -0.1
SHKBP1Q8TBC3 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
SHKBP1Q8TBC3 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SHKBP1Q8TBC3 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SHKBP1Q8TBC3 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SHKBP1Q8TBC3 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC14.4□□□□□ -0.1
SHKBP1Q8TBC3 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SHKBP1Q8TBC3 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC14.4□□□□□ -0.1
SHKBP1Q8TBC3 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC14.4□□□□□ -0.1
SHKBP1Q8TBC3 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
SHKBP1Q8TBC3 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SHKBP1Q8TBC3 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC14.4□□□□□ -0.1
SHKBP1Q8TBC3 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms