Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
POLR3DP05423 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
POLR3DP05423 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
POLR3DP05423 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
POLR3DP05423 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC16.43■□□□□ 0.22
POLR3DP05423 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC16.43■□□□□ 0.22
POLR3DP05423 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
POLR3DP05423 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
POLR3DP05423 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
POLR3DP05423 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
POLR3DP05423 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
POLR3DP05423 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
POLR3DP05423 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
POLR3DP05423 AC087386.2-201ENST00000623212 4637 ntBASIC16.43■□□□□ 0.22
POLR3DP05423 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
POLR3DP05423 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
POLR3DP05423 AL157792.1-201ENST00000488281 530 ntBASIC16.43■□□□□ 0.22
POLR3DP05423 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC16.43■□□□□ 0.22
POLR3DP05423 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
POLR3DP05423 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC16.43■□□□□ 0.22
POLR3DP05423 MT3-202ENST00000561640 514 ntTSL 3 BASIC16.43■□□□□ 0.22
POLR3DP05423 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC16.43■□□□□ 0.22
POLR3DP05423 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
POLR3DP05423 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC16.43■□□□□ 0.22
POLR3DP05423 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC16.43■□□□□ 0.22
POLR3DP05423 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
POLR3DP05423 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC16.43■□□□□ 0.22
POLR3DP05423 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
POLR3DP05423 Z98885.3-201ENST00000624882 1757 ntBASIC16.43■□□□□ 0.22
POLR3DP05423 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC16.43■□□□□ 0.22
POLR3DP05423 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
POLR3DP05423 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
POLR3DP05423 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
POLR3DP05423 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
POLR3DP05423 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
POLR3DP05423 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
POLR3DP05423 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
POLR3DP05423 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC16.43■□□□□ 0.22
POLR3DP05423 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
POLR3DP05423 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC16.43■□□□□ 0.22
POLR3DP05423 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
POLR3DP05423 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC16.43■□□□□ 0.22
POLR3DP05423 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
POLR3DP05423 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
POLR3DP05423 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
POLR3DP05423 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
POLR3DP05423 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC16.42■□□□□ 0.22
POLR3DP05423 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
POLR3DP05423 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
POLR3DP05423 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
POLR3DP05423 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
POLR3DP05423 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
POLR3DP05423 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC16.42■□□□□ 0.22
POLR3DP05423 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
POLR3DP05423 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC16.42■□□□□ 0.22
POLR3DP05423 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
POLR3DP05423 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
POLR3DP05423 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
POLR3DP05423 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
POLR3DP05423 AC106827.1-201ENST00000366454 431 ntBASIC16.42■□□□□ 0.22
POLR3DP05423 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
POLR3DP05423 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
POLR3DP05423 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC16.42■□□□□ 0.22
POLR3DP05423 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC16.42■□□□□ 0.22
POLR3DP05423 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
POLR3DP05423 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC16.42■□□□□ 0.22
POLR3DP05423 GCSHP3-201ENST00000431120 391 ntBASIC16.42■□□□□ 0.22
POLR3DP05423 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
POLR3DP05423 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC16.42■□□□□ 0.22
POLR3DP05423 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC16.42■□□□□ 0.22
POLR3DP05423 PGAM1P12-201ENST00000505622 748 ntBASIC16.42■□□□□ 0.22
POLR3DP05423 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC16.42■□□□□ 0.22
POLR3DP05423 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC16.42■□□□□ 0.22
POLR3DP05423 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC16.42■□□□□ 0.22
POLR3DP05423 CES1P2-201ENST00000566467 1242 ntBASIC16.42■□□□□ 0.22
POLR3DP05423 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
POLR3DP05423 AC040160.2-201ENST00000623816 1675 ntBASIC16.42■□□□□ 0.22
POLR3DP05423 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
POLR3DP05423 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
POLR3DP05423 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
POLR3DP05423 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
POLR3DP05423 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
POLR3DP05423 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
POLR3DP05423 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
POLR3DP05423 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
POLR3DP05423 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC16.42■□□□□ 0.22
POLR3DP05423 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC16.42■□□□□ 0.22
POLR3DP05423 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
POLR3DP05423 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
POLR3DP05423 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
POLR3DP05423 PPT1-213ENST00000641319 2388 ntBASIC16.42■□□□□ 0.22
POLR3DP05423 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC16.42■□□□□ 0.22
POLR3DP05423 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
POLR3DP05423 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
POLR3DP05423 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
POLR3DP05423 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC16.42■□□□□ 0.22
POLR3DP05423 AC020763.3-201ENST00000625095 2904 ntBASIC16.42■□□□□ 0.22
POLR3DP05423 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
POLR3DP05423 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
POLR3DP05423 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms