Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
VTNP04004 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
VTNP04004 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
VTNP04004 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
VTNP04004 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
VTNP04004 PINX1-201ENST00000314787 1545 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
VTNP04004 AC064850.1-201ENST00000413279 1398 ntBASIC14.96□□□□□ -0.02
VTNP04004 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.02
VTNP04004 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
VTNP04004 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
VTNP04004 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
VTNP04004 AC005840.4-201ENST00000541242 2494 ntBASIC14.95□□□□□ -0.02
VTNP04004 CLEC10A-202ENST00000416562 1646 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
VTNP04004 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
VTNP04004 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
VTNP04004 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.95□□□□□ -0.02
VTNP04004 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
VTNP04004 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
VTNP04004 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.95□□□□□ -0.02
VTNP04004 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
VTNP04004 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
VTNP04004 GALNT7-201ENST00000265000 4307 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
VTNP04004 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
VTNP04004 GK-205ENST00000378946 3638 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
VTNP04004 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC14.95□□□□□ -0.02
VTNP04004 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
VTNP04004 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
VTNP04004 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
VTNP04004 SIRPB3P-201ENST00000340424 1216 ntBASIC14.95□□□□□ -0.02
VTNP04004 HLA-DMA-202ENST00000395303 1007 ntBASIC14.95□□□□□ -0.02
VTNP04004 AC112250.1-201ENST00000504640 745 ntBASIC14.95□□□□□ -0.02
VTNP04004 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC14.95□□□□□ -0.02
VTNP04004 RN7SL605P-201ENST00000577229 281 ntBASIC14.95□□□□□ -0.02
VTNP04004 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC14.95□□□□□ -0.02
VTNP04004 RN7SL134P-201ENST00000579756 303 ntBASIC14.95□□□□□ -0.02
VTNP04004 MBP-238ENST00000580402 915 ntTSL 5 BASIC14.95□□□□□ -0.02
VTNP04004 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC14.95□□□□□ -0.02
VTNP04004 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
VTNP04004 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
VTNP04004 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
VTNP04004 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC14.95□□□□□ -0.02
VTNP04004 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
VTNP04004 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC14.95□□□□□ -0.02
VTNP04004 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
VTNP04004 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.95□□□□□ -0.02
VTNP04004 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
VTNP04004 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
VTNP04004 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
VTNP04004 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC14.95□□□□□ -0.02
VTNP04004 HTR3D-201ENST00000334128 1459 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
VTNP04004 AAR2-203ENST00000397286 1466 ntTSL 5 BASIC14.95□□□□□ -0.02
VTNP04004 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
VTNP04004 KRT8P25-201ENST00000473150 1456 ntBASIC14.95□□□□□ -0.02
VTNP04004 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC14.95□□□□□ -0.02
VTNP04004 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
VTNP04004 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VTNP04004 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
VTNP04004 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
VTNP04004 FAM9B-201ENST00000327220 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VTNP04004 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
VTNP04004 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.94□□□□□ -0.02
VTNP04004 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
VTNP04004 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC14.94□□□□□ -0.02
VTNP04004 TRO-225ENST00000622017 1403 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
VTNP04004 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
VTNP04004 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VTNP04004 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
VTNP04004 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VTNP04004 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
VTNP04004 RET-205ENST00000615310 4337 ntTSL 5 BASIC14.94□□□□□ -0.02
VTNP04004 FAM90A12P-201ENST00000519497 2375 ntBASIC14.94□□□□□ -0.02
VTNP04004 FAM90A24P-201ENST00000520792 2369 ntBASIC14.94□□□□□ -0.02
VTNP04004 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
VTNP04004 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VTNP04004 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
VTNP04004 MPV17-209ENST00000405983 859 ntTSL 5 BASIC14.94□□□□□ -0.02
VTNP04004 PGAM1P11-201ENST00000416729 680 ntBASIC14.94□□□□□ -0.02
VTNP04004 IFNWP2-201ENST00000431203 580 ntBASIC14.94□□□□□ -0.02
VTNP04004 RPSAP12-201ENST00000435879 888 ntBASIC14.94□□□□□ -0.02
VTNP04004 ZNF877P-201ENST00000437614 612 ntBASIC14.94□□□□□ -0.02
VTNP04004 AL451000.1-201ENST00000451300 1186 ntBASIC14.94□□□□□ -0.02
VTNP04004 CITED1-209ENST00000453707 998 ntAPPRIS ALT2 TSL 3 BASIC14.94□□□□□ -0.02
VTNP04004 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC14.94□□□□□ -0.02
VTNP04004 RBM4-207ENST00000506523 654 ntTSL 3 BASIC14.94□□□□□ -0.02
VTNP04004 UBE2D3-221ENST00000507845 577 ntTSL 4 BASIC14.94□□□□□ -0.02
VTNP04004 AC025171.3-201ENST00000509036 472 ntTSL 2 BASIC14.94□□□□□ -0.02
VTNP04004 AC145422.1-201ENST00000541574 544 ntTSL 3 BASIC14.94□□□□□ -0.02
VTNP04004 KNOP1P1-201ENST00000542108 989 ntBASIC14.94□□□□□ -0.02
VTNP04004 BCDIN3D-AS1-202ENST00000549124 468 ntTSL 3 BASIC14.94□□□□□ -0.02
VTNP04004 GGNBP1-204ENST00000613113 887 ntBASIC14.94□□□□□ -0.02
VTNP04004 GSTT2-203ENST00000634759 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VTNP04004 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VTNP04004 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VTNP04004 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC14.94□□□□□ -0.02
VTNP04004 RPF1-201ENST00000370654 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VTNP04004 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
VTNP04004 MARK2P9-201ENST00000430958 1727 ntBASIC14.94□□□□□ -0.02
VTNP04004 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VTNP04004 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
VTNP04004 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms