Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 ARHGEF10-205ENST00000518288 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
AP3S1Q92572 GREM2-201ENST00000318160 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
AP3S1Q92572 SPTY2D1-201ENST00000336349 5754 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
AP3S1Q92572 DIDO1-202ENST00000354665 2707 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
AP3S1Q92572 PIK3R5-202ENST00000447110 4495 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
AP3S1Q92572 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
AP3S1Q92572 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
AP3S1Q92572 PTK7-204ENST00000349241 3801 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
AP3S1Q92572 FAM213A-204ENST00000372188 829 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
AP3S1Q92572 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC12.16□□□□□ -0.46
AP3S1Q92572 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC12.16□□□□□ -0.46
AP3S1Q92572 AC067863.1-201ENST00000494933 530 ntBASIC12.16□□□□□ -0.46
AP3S1Q92572 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
AP3S1Q92572 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC12.16□□□□□ -0.46
AP3S1Q92572 AC092552.1-201ENST00000547243 906 ntBASIC12.16□□□□□ -0.46
AP3S1Q92572 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
AP3S1Q92572 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
AP3S1Q92572 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
AP3S1Q92572 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC12.16□□□□□ -0.46
AP3S1Q92572 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC12.16□□□□□ -0.46
AP3S1Q92572 AC008738.7-201ENST00000609744 511 ntBASIC12.16□□□□□ -0.46
AP3S1Q92572 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
AP3S1Q92572 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
AP3S1Q92572 CUL9-201ENST00000252050 7780 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
AP3S1Q92572 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC12.16□□□□□ -0.46
AP3S1Q92572 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
AP3S1Q92572 DUT-208ENST00000559540 1441 ntTSL 2 BASIC12.16□□□□□ -0.46
AP3S1Q92572 CMC2-201ENST00000219400 10301 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
AP3S1Q92572 ITIH5-201ENST00000397145 3132 ntTSL 2 BASIC12.16□□□□□ -0.46
AP3S1Q92572 EXOC7-207ENST00000411744 2031 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
AP3S1Q92572 FAM198B-207ENST00000592057 3425 ntTSL 2 BASIC12.16□□□□□ -0.46
AP3S1Q92572 RIPK4-202ENST00000352483 4016 ntTSL 5 BASIC12.16□□□□□ -0.46
AP3S1Q92572 DNAJC30-201ENST00000395176 2485 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
AP3S1Q92572 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
AP3S1Q92572 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
AP3S1Q92572 FAM214B-204ENST00000378566 2566 ntTSL 2 BASIC12.16□□□□□ -0.46
AP3S1Q92572 PSMD2-205ENST00000435761 2574 ntTSL 2 BASIC12.16□□□□□ -0.46
AP3S1Q92572 HS6ST1-201ENST00000259241 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
AP3S1Q92572 HYOU1-217ENST00000612687 4360 ntTSL 5 BASIC12.16□□□□□ -0.46
AP3S1Q92572 PRRG4-201ENST00000257836 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
AP3S1Q92572 NAPB-207ENST00000617876 3883 ntAPPRIS ALT1 TSL 2 BASIC12.15□□□□□ -0.46
AP3S1Q92572 IFT122-204ENST00000349441 3569 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
AP3S1Q92572 LGR6-203ENST00000367278 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
AP3S1Q92572 FOXN3-201ENST00000261302 2542 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.46
AP3S1Q92572 KCNV1-202ENST00000524391 6979 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
AP3S1Q92572 ZSCAN5B-202ENST00000586855 2059 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
AP3S1Q92572 AMT-256ENST00000638063 1783 ntTSL 5 BASIC12.15□□□□□ -0.46
AP3S1Q92572 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC12.15□□□□□ -0.46
AP3S1Q92572 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
AP3S1Q92572 PPP6R2-209ENST00000612753 4104 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
AP3S1Q92572 HMGCS1-201ENST00000325110 3506 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
AP3S1Q92572 FAM184A-211ENST00000521531 3244 ntTSL 5 BASIC12.15□□□□□ -0.46
AP3S1Q92572 CA10-202ENST00000442502 2935 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
AP3S1Q92572 RGS3-204ENST00000350696 4387 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
AP3S1Q92572 CICP2-201ENST00000420675 2328 ntBASIC12.15□□□□□ -0.46
AP3S1Q92572 API5-208ENST00000531273 1868 ntTSL 2 BASIC12.15□□□□□ -0.46
AP3S1Q92572 YWHAB-201ENST00000353703 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
AP3S1Q92572 LINC01649-202ENST00000634255 1743 ntTSL 5 BASIC12.15□□□□□ -0.46
AP3S1Q92572 MCM3AP-201ENST00000291688 6193 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
AP3S1Q92572 MAGED1-201ENST00000326587 2747 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
AP3S1Q92572 ZNF555-203ENST00000591539 2270 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
AP3S1Q92572 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
AP3S1Q92572 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
AP3S1Q92572 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
AP3S1Q92572 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC12.15□□□□□ -0.46
AP3S1Q92572 VMA21-202ENST00000370361 693 ntTSL 5 BASIC12.15□□□□□ -0.46
AP3S1Q92572 RGPD8-203ENST00000409750 5544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
AP3S1Q92572 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC12.15□□□□□ -0.46
AP3S1Q92572 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC12.15□□□□□ -0.46
AP3S1Q92572 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC12.15□□□□□ -0.46
AP3S1Q92572 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC12.15□□□□□ -0.46
AP3S1Q92572 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
AP3S1Q92572 POLD2P1-201ENST00000511220 997 ntBASIC12.15□□□□□ -0.46
AP3S1Q92572 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC12.15□□□□□ -0.46
AP3S1Q92572 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
AP3S1Q92572 AC055876.2-201ENST00000531834 546 ntBASIC12.15□□□□□ -0.46
AP3S1Q92572 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
AP3S1Q92572 RBM8B-201ENST00000555532 525 ntBASIC12.15□□□□□ -0.46
AP3S1Q92572 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC12.15□□□□□ -0.46
AP3S1Q92572 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
AP3S1Q92572 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
AP3S1Q92572 AC015911.4-201ENST00000588022 1070 ntBASIC12.15□□□□□ -0.46
AP3S1Q92572 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
AP3S1Q92572 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC12.15□□□□□ -0.46
AP3S1Q92572 AC093726.1-201ENST00000608064 963 ntBASIC12.15□□□□□ -0.46
AP3S1Q92572 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC12.15□□□□□ -0.46
AP3S1Q92572 RABGAP1L-207ENST00000367690 1815 ntTSL 2 BASIC12.15□□□□□ -0.46
AP3S1Q92572 TTC4-201ENST00000371281 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
AP3S1Q92572 GOLGA6L7P-201ENST00000567390 2397 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
AP3S1Q92572 LIN28A-202ENST00000326279 4008 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
AP3S1Q92572 SH2D7-201ENST00000328828 2750 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
AP3S1Q92572 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
AP3S1Q92572 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC12.15□□□□□ -0.46
AP3S1Q92572 LINC00523-206ENST00000556697 2071 ntTSL 2 BASIC12.15□□□□□ -0.46
AP3S1Q92572 LRFN5-201ENST00000298119 3723 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
AP3S1Q92572 HCN3-201ENST00000368358 3718 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
AP3S1Q92572 NPC1L1-204ENST00000546276 4826 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
AP3S1Q92572 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
AP3S1Q92572 RYR1-202ENST00000359596 15117 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.46
AP3S1Q92572 TMEM123-202ENST00000398136 3579 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms