Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 ATG7-213ENST00000446450 2042 ntTSL 2 BASIC10.92□□□□□ -0.66
IFNA1P01562 TPT1-212ENST00000530705 4735 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
IFNA1P01562 SEC13-203ENST00000383801 1479 ntTSL 2 BASIC10.92□□□□□ -0.66
IFNA1P01562 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
IFNA1P01562 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
IFNA1P01562 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC10.92□□□□□ -0.66
IFNA1P01562 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC10.92□□□□□ -0.66
IFNA1P01562 CHTF18-201ENST00000262315 3090 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
IFNA1P01562 CACNG3-201ENST00000005284 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
IFNA1P01562 TMEM147-AS1-205ENST00000590717 3300 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
IFNA1P01562 WASF2-202ENST00000618852 5676 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
IFNA1P01562 SYDE1-203ENST00000600252 3832 ntTSL 2 BASIC10.92□□□□□ -0.66
IFNA1P01562 ARHGEF3-213ENST00000496106 1994 ntTSL 2 BASIC10.92□□□□□ -0.66
IFNA1P01562 KLF4-206ENST00000610832 1956 ntTSL 5 BASIC10.92□□□□□ -0.66
IFNA1P01562 CHFR-201ENST00000266880 11133 ntTSL 2 BASIC10.92□□□□□ -0.66
IFNA1P01562 MIS12-202ENST00000573759 2204 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
IFNA1P01562 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
IFNA1P01562 INAVA-201ENST00000367342 4298 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
IFNA1P01562 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC10.92□□□□□ -0.66
IFNA1P01562 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
IFNA1P01562 ALDOA-213ENST00000564595 1663 ntTSL 2 BASIC10.92□□□□□ -0.66
IFNA1P01562 F2RL3-201ENST00000248076 3473 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
IFNA1P01562 TEX13D-201ENST00000632372 4203 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
IFNA1P01562 FAM95C-205ENST00000637556 2421 ntAPPRIS P5 TSL 2 BASIC10.92□□□□□ -0.66
IFNA1P01562 KLC4-201ENST00000259708 2688 ntAPPRIS P4 TSL 2 BASIC10.92□□□□□ -0.66
IFNA1P01562 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
IFNA1P01562 MRPS16-202ENST00000372945 2634 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
IFNA1P01562 ITIH5-201ENST00000397145 3132 ntTSL 2 BASIC10.91□□□□□ -0.66
IFNA1P01562 GDPD5-202ENST00000443276 3106 ntTSL 5 BASIC10.91□□□□□ -0.66
IFNA1P01562 KIZ-208ENST00000616848 1875 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
IFNA1P01562 C2CD2-201ENST00000329623 5844 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
IFNA1P01562 STAT1-201ENST00000361099 4310 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
IFNA1P01562 CICP2-201ENST00000420675 2328 ntBASIC10.91□□□□□ -0.66
IFNA1P01562 PCDHGA2-202ENST00000528330 4543 ntAPPRIS ALT2 BASIC10.91□□□□□ -0.66
IFNA1P01562 TGOLN2-202ENST00000377386 6489 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
IFNA1P01562 IGSF9-202ENST00000368094 4044 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
IFNA1P01562 SNRNP27-201ENST00000244227 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
IFNA1P01562 STK26-204ENST00000481105 1835 ntTSL 2 BASIC10.91□□□□□ -0.66
IFNA1P01562 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
IFNA1P01562 SMARCA2-258ENST00000637103 5657 ntTSL 5 BASIC10.91□□□□□ -0.66
IFNA1P01562 CPT1C-217ENST00000598293 2767 ntAPPRIS P3 TSL 2 BASIC10.91□□□□□ -0.66
IFNA1P01562 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
IFNA1P01562 SHMT1P1-201ENST00000419974 1312 ntBASIC10.91□□□□□ -0.66
IFNA1P01562 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
IFNA1P01562 DNAH2-202ENST00000570791 2994 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
IFNA1P01562 DIDO1-202ENST00000354665 2707 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
IFNA1P01562 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
IFNA1P01562 LAMA4-219ENST00000522006 6438 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
IFNA1P01562 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
IFNA1P01562 STOM-202ENST00000347359 870 ntTSL 2 BASIC10.91□□□□□ -0.66
IFNA1P01562 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
IFNA1P01562 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
IFNA1P01562 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
IFNA1P01562 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC10.91□□□□□ -0.66
IFNA1P01562 PGGT1BP2-201ENST00000398621 1028 ntBASIC10.91□□□□□ -0.66
IFNA1P01562 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC10.91□□□□□ -0.66
IFNA1P01562 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC10.91□□□□□ -0.66
IFNA1P01562 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC10.91□□□□□ -0.66
IFNA1P01562 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC10.91□□□□□ -0.66
IFNA1P01562 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC10.91□□□□□ -0.66
IFNA1P01562 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
IFNA1P01562 PPP6R2P1-201ENST00000450880 1275 ntBASIC10.91□□□□□ -0.66
IFNA1P01562 EIF4HP1-201ENST00000453115 687 ntBASIC10.91□□□□□ -0.66
IFNA1P01562 AC023141.5-201ENST00000458585 616 ntBASIC10.91□□□□□ -0.66
IFNA1P01562 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC10.91□□□□□ -0.66
IFNA1P01562 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
IFNA1P01562 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC10.91□□□□□ -0.66
IFNA1P01562 AL390955.2-201ENST00000603032 514 ntBASIC10.91□□□□□ -0.66
IFNA1P01562 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC10.91□□□□□ -0.66
IFNA1P01562 STRA6-201ENST00000323940 2864 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
IFNA1P01562 FRMD1-205ENST00000440994 2857 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
IFNA1P01562 TBC1D14-201ENST00000409757 4925 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
IFNA1P01562 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
IFNA1P01562 SCRN1-207ENST00000434476 1454 ntTSL 2 BASIC10.91□□□□□ -0.66
IFNA1P01562 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC10.91□□□□□ -0.66
IFNA1P01562 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC10.91□□□□□ -0.66
IFNA1P01562 FAM184A-211ENST00000521531 3244 ntTSL 5 BASIC10.91□□□□□ -0.66
IFNA1P01562 EHMT2-202ENST00000375530 3856 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
IFNA1P01562 UNC45B-202ENST00000394570 5638 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
IFNA1P01562 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC10.91□□□□□ -0.66
IFNA1P01562 ESPNL-203ENST00000409506 3610 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
IFNA1P01562 CNBP-207ENST00000502976 1626 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
IFNA1P01562 UBE2L3-204ENST00000545681 2932 ntTSL 2 BASIC10.91□□□□□ -0.66
IFNA1P01562 NUMA1-202ENST00000358965 7227 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
IFNA1P01562 HSP90AA1-202ENST00000334701 3510 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
IFNA1P01562 ABCB8-222ENST00000542328 4371 ntTSL 2 BASIC10.91□□□□□ -0.66
IFNA1P01562 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
IFNA1P01562 LARGE1-202ENST00000397394 4138 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
IFNA1P01562 PLEKHG5-202ENST00000377725 3475 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
IFNA1P01562 TIAM2-203ENST00000360366 5771 ntTSL 5 BASIC10.9□□□□□ -0.66
IFNA1P01562 RBM25-204ENST00000526754 1567 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
IFNA1P01562 CD27-AS1-209ENST00000545339 1766 ntTSL 5 BASIC10.9□□□□□ -0.66
IFNA1P01562 ZDHHC7-201ENST00000313732 3442 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
IFNA1P01562 TSPEAR-204ENST00000614657 4027 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
IFNA1P01562 AC023355.1-202ENST00000612262 4242 ntTSL 5 BASIC10.9□□□□□ -0.66
IFNA1P01562 GRIA4-202ENST00000393125 2994 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
IFNA1P01562 SMAD9-201ENST00000350148 5447 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
IFNA1P01562 FAM105A-201ENST00000274217 3597 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
IFNA1P01562 ZNF140-202ENST00000355557 3550 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
IFNA1P01562 NANP-201ENST00000304788 3964 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms