RNA–Protein interactions for RNA: ENST00000528330.2

PCDHGA2-202, Transcript of protocadherin gamma subfamily A, 2, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA2, Length 4,543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA2-202ENST00000528330 NISCHQ9Y2I1 1504 aa23.27■■□□□ 1.32
PCDHGA2-202ENST00000528330 DCAF8L2P0C7V8 631 aa22.63■■□□□ 1.21
PCDHGA2-202ENST00000528330 SHROOM4Q9ULL8 1493 aa21.13■□□□□ 0.97
PCDHGA2-202ENST00000528330 SUPT5HO00267 1087 aaKnown RBP21.09■□□□□ 0.97
PCDHGA2-202ENST00000528330 EHMT2Q96KQ7 1210 aa20.17■□□□□ 0.82
PCDHGA2-202ENST00000528330 ABCC9O60706 1549 aa19.85■□□□□ 0.77
PCDHGA2-202ENST00000528330 FAM9AQ8IZU1 332 aaPredicted RBP19.83■□□□□ 0.77
PCDHGA2-202ENST00000528330 TRIM41Q8WV44 630 aa19.63■□□□□ 0.73
PCDHGA2-202ENST00000528330 APLP2Q06481 763 aa19.6■□□□□ 0.73
PCDHGA2-202ENST00000528330 RANGAP1P46060 587 aaPredicted RBP19.47■□□□□ 0.71
PCDHGA2-202ENST00000528330 CCDC180Q9P1Z9 1646 aa19.44■□□□□ 0.7
PCDHGA2-202ENST00000528330 PABPN1Q86U42 306 aaKnown RBP eCLIP19.41■□□□□ 0.7
PCDHGA2-202ENST00000528330 TTBK1Q5TCY1 1321 aaPredicted RBP19.36■□□□□ 0.69
PCDHGA2-202ENST00000528330 ZCCHC6Q5VYS8 1495 aaKnown RBP19.32■□□□□ 0.68
PCDHGA2-202ENST00000528330 UBTFP17480 764 aaKnown RBP19.28■□□□□ 0.68
PCDHGA2-202ENST00000528330 ATP1B4Q9UN42 357 aaPredicted RBP19.24■□□□□ 0.67
PCDHGA2-202ENST00000528330 CHIC1Q5VXU3 224 aa19.17■□□□□ 0.66
PCDHGA2-202ENST00000528330 PCGF6Q9BYE7 350 aa19.09■□□□□ 0.65
PCDHGA2-202ENST00000528330 SCRIBQ14160 1630 aa19■□□□□ 0.63
PCDHGA2-202ENST00000528330 LOC105371045A0A1W2PR82 267 aa18.89■□□□□ 0.61
PCDHGA2-202ENST00000528330 PPARGC1BQ86YN6 1023 aaKnown RBP18.78■□□□□ 0.6
PCDHGA2-202ENST00000528330 RB1CC1Q8TDY2 1594 aa18.78■□□□□ 0.6
PCDHGA2-202ENST00000528330 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.74■□□□□ 0.59
PCDHGA2-202ENST00000528330 HNRNPUL2Q1KMD3 747 aaKnown RBP18.74■□□□□ 0.59
PCDHGA2-202ENST00000528330 NACADO15069 1562 aa18.72■□□□□ 0.59
PCDHGA2-202ENST00000528330 CCER1Q8TC90 406 aaPredicted RBP18.66■□□□□ 0.58
PCDHGA2-202ENST00000528330 DCAF1Q9Y4B6 1507 aa18.62■□□□□ 0.57
PCDHGA2-202ENST00000528330 TRIM26Q12899 539 aaPredicted RBP18.57■□□□□ 0.56
PCDHGA2-202ENST00000528330 ZEB1P37275 1124 aaPredicted RBP18.57■□□□□ 0.56
PCDHGA2-202ENST00000528330 MYT1LQ9UL68 1186 aa18.53■□□□□ 0.56
PCDHGA2-202ENST00000528330 ITGAEP38570 1179 aa18.51■□□□□ 0.55
PCDHGA2-202ENST00000528330 FBLN2P98095 1184 aa18.47■□□□□ 0.55
PCDHGA2-202ENST00000528330 RSF1Q96T23 1441 aaPredicted RBP18.44■□□□□ 0.54
PCDHGA2-202ENST00000528330 CSRNP3Q8WYN3 585 aa18.37■□□□□ 0.53
PCDHGA2-202ENST00000528330 CECR2Q9BXF3 1484 aa18.24■□□□□ 0.51
PCDHGA2-202ENST00000528330 MYO15BQ96JP2 1530 aa18.21■□□□□ 0.51
PCDHGA2-202ENST00000528330 BAZ1AQ9NRL2 1556 aaPredicted RBP18.2■□□□□ 0.5
PCDHGA2-202ENST00000528330 BAZ1BQ9UIG0 1483 aaKnown RBP18.16■□□□□ 0.5
PCDHGA2-202ENST00000528330 P3H3Q8IVL6 736 aa18.14■□□□□ 0.49
PCDHGA2-202ENST00000528330 FAM50AQ14320 339 aaKnown RBP18.13■□□□□ 0.49
PCDHGA2-202ENST00000528330 HRCP23327 699 aa18.12■□□□□ 0.49
PCDHGA2-202ENST00000528330 ARID3CA6NKF2 412 aa18.08■□□□□ 0.48
PCDHGA2-202ENST00000528330 PELP1Q8IZL8 1130 aaKnown RBP18.08■□□□□ 0.48
PCDHGA2-202ENST00000528330 MROH2BQ7Z745 1585 aa18.01■□□□□ 0.47
PCDHGA2-202ENST00000528330 POLR3GLQ9BT43 218 aa18■□□□□ 0.47
PCDHGA2-202ENST00000528330 WRNQ14191 1432 aaPredicted RBP eCLIP17.95■□□□□ 0.46
PCDHGA2-202ENST00000528330 TRIM52Q96A61 297 aa17.94■□□□□ 0.46
PCDHGA2-202ENST00000528330 CENPBP07199 599 aaPredicted RBP17.93■□□□□ 0.46
PCDHGA2-202ENST00000528330 EEA1Q15075 1411 aa17.85■□□□□ 0.45
PCDHGA2-202ENST00000528330 CDK11AQ9UQ88 783 aaPredicted RBP17.83■□□□□ 0.45
PCDHGA2-202ENST00000528330 YTHDC1Q96MU7 727 aaKnown RBP17.83■□□□□ 0.44
PCDHGA2-202ENST00000528330 CNGB1Q14028 1251 aaPredicted RBP17.82■□□□□ 0.44
PCDHGA2-202ENST00000528330 CHMP7Q8WUX9 453 aaPredicted RBP17.82■□□□□ 0.44
PCDHGA2-202ENST00000528330 ZNF777Q9ULD5 760 aaPredicted RBP17.81■□□□□ 0.44
PCDHGA2-202ENST00000528330 SMARCA2P51531 1590 aa17.81■□□□□ 0.44
PCDHGA2-202ENST00000528330 CCDC88BA6NC98 1476 aa17.8■□□□□ 0.44
PCDHGA2-202ENST00000528330 NPM1P06748 294 aaKnown RBP eCLIP17.78■□□□□ 0.44
PCDHGA2-202ENST00000528330 NEUROD1Q13562 356 aa17.75■□□□□ 0.43
PCDHGA2-202ENST00000528330 KIF27Q86VH2 1401 aa17.74■□□□□ 0.43
PCDHGA2-202ENST00000528330 WIZO95785 1651 aa17.73■□□□□ 0.43
PCDHGA2-202ENST00000528330 SLC4A1APQ9BWU0 796 aaKnown RBP17.73■□□□□ 0.43
PCDHGA2-202ENST00000528330 CLIP1P30622 1438 aa17.72■□□□□ 0.43
PCDHGA2-202ENST00000528330 GOLGA3Q08378 1498 aa17.71■□□□□ 0.43
PCDHGA2-202ENST00000528330 TOP2AP11388 1531 aaKnown RBP17.68■□□□□ 0.42
PCDHGA2-202ENST00000528330 ZNF326Q5BKZ1 582 aaKnown RBP17.67■□□□□ 0.42
PCDHGA2-202ENST00000528330 ATAD2BQ9ULI0 1458 aa17.66■□□□□ 0.42
PCDHGA2-202ENST00000528330 SMARCA4P51532 1647 aa17.64■□□□□ 0.41
PCDHGA2-202ENST00000528330 NEFLP07196 543 aa17.64■□□□□ 0.41
PCDHGA2-202ENST00000528330 CEP162Q5TB80 1403 aa17.63■□□□□ 0.41
PCDHGA2-202ENST00000528330 ERCC6Q03468 1493 aa17.63■□□□□ 0.41
PCDHGA2-202ENST00000528330 CEP164Q9UPV0 1460 aa17.62■□□□□ 0.41
PCDHGA2-202ENST00000528330 TNIKQ9UKE5 1360 aa17.6■□□□□ 0.41
PCDHGA2-202ENST00000528330 SOGA1O94964 1423 aa17.58■□□□□ 0.41
PCDHGA2-202ENST00000528330 ABCC8Q09428 1581 aa17.57■□□□□ 0.4
PCDHGA2-202ENST00000528330 MTUS2Q5JR59 1369 aa17.54■□□□□ 0.4
PCDHGA2-202ENST00000528330 DIEXFQ68CQ4 756 aaKnown RBP17.53■□□□□ 0.4
PCDHGA2-202ENST00000528330 CUX2O14529 1486 aa17.53■□□□□ 0.4
PCDHGA2-202ENST00000528330 ESF1Q9H501 851 aaKnown RBP17.53■□□□□ 0.4
PCDHGA2-202ENST00000528330 CADPSQ9ULU8 1353 aa17.53■□□□□ 0.4
PCDHGA2-202ENST00000528330 PDS5BQ9NTI5 1447 aa17.52■□□□□ 0.4
PCDHGA2-202ENST00000528330 BCANQ96GW7 911 aa17.5■□□□□ 0.39
PCDHGA2-202ENST00000528330 CARMIL1Q5VZK9 1371 aa17.48■□□□□ 0.39
PCDHGA2-202ENST00000528330 CHIC2Q9UKJ5 165 aa17.46■□□□□ 0.39
PCDHGA2-202ENST00000528330 PLPPR3Q6T4P5 718 aa17.45■□□□□ 0.38
PCDHGA2-202ENST00000528330 KCNH8Q96L42 1107 aa17.45■□□□□ 0.38
PCDHGA2-202ENST00000528330 TSPY4P0CV99 314 aa17.42■□□□□ 0.38
PCDHGA2-202ENST00000528330 TSPY10P0CW01 314 aa17.42■□□□□ 0.38
PCDHGA2-202ENST00000528330 CHGAP10645 457 aaKnown RBP17.4■□□□□ 0.38
PCDHGA2-202ENST00000528330 PLEKHD1A6NEE1 506 aa17.39■□□□□ 0.37
PCDHGA2-202ENST00000528330 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.38■□□□□ 0.37
PCDHGA2-202ENST00000528330 ZNF316A6NFI3 1004 aaPredicted RBP17.37■□□□□ 0.37
PCDHGA2-202ENST00000528330 TDRD9Q8NDG6 1382 aaKnown RBP17.36■□□□□ 0.37
PCDHGA2-202ENST00000528330 STAG3Q9UJ98 1225 aa17.36■□□□□ 0.37
PCDHGA2-202ENST00000528330 NCAPD3P42695 1498 aa17.34■□□□□ 0.37
PCDHGA2-202ENST00000528330 EIF4G1Q04637 1599 aaKnown RBP17.33■□□□□ 0.36
PCDHGA2-202ENST00000528330 TONSLQ96HA7 1378 aa17.28■□□□□ 0.36
PCDHGA2-202ENST00000528330 FHAD1B1AJZ9 1412 aa17.27■□□□□ 0.36
PCDHGA2-202ENST00000528330 FANCD2Q9BXW9 1451 aa17.26■□□□□ 0.35
PCDHGA2-202ENST00000528330 ERICH6Q7L0X2 663 aa17.26■□□□□ 0.35
PCDHGA2-202ENST00000528330 RRP7BPQ9NSQ0 103 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms