RNA–Protein interactions for RNA: ENST00000637103.1

SMARCA2-258, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5 BASIC

Gene SMARCA2, Length 5,657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-258ENST00000637103 PELP1Q8IZL8 1130 aaKnown RBP18.37■□□□□ 0.53
SMARCA2-258ENST00000637103 DCAF8L2P0C7V8 631 aa18.36■□□□□ 0.53
SMARCA2-258ENST00000637103 SUPT5HO00267 1087 aaKnown RBP18.06■□□□□ 0.48
SMARCA2-258ENST00000637103 MYT1Q01538 1121 aa17.96■□□□□ 0.47
SMARCA2-258ENST00000637103 CENPBP07199 599 aaPredicted RBP17.65■□□□□ 0.42
SMARCA2-258ENST00000637103 NISCHQ9Y2I1 1504 aa17.63■□□□□ 0.41
SMARCA2-258ENST00000637103 ZEB1P37275 1124 aaPredicted RBP17.56■□□□□ 0.4
SMARCA2-258ENST00000637103 ERICH6Q7L0X2 663 aa17.53■□□□□ 0.4
SMARCA2-258ENST00000637103 SHROOM4Q9ULL8 1493 aa17.51■□□□□ 0.39
SMARCA2-258ENST00000637103 PCGF6Q9BYE7 350 aa17.51■□□□□ 0.39
SMARCA2-258ENST00000637103 CCER1Q8TC90 406 aaPredicted RBP17.48■□□□□ 0.39
SMARCA2-258ENST00000637103 EHMT2Q96KQ7 1210 aa17.36■□□□□ 0.37
SMARCA2-258ENST00000637103 APLP2Q06481 763 aa17.36■□□□□ 0.37
SMARCA2-258ENST00000637103 NEFLP07196 543 aa17.07■□□□□ 0.32
SMARCA2-258ENST00000637103 FAM9AQ8IZU1 332 aaPredicted RBP17■□□□□ 0.31
SMARCA2-258ENST00000637103 HRCP23327 699 aa16.97■□□□□ 0.31
SMARCA2-258ENST00000637103 TTBK1Q5TCY1 1321 aaPredicted RBP16.93■□□□□ 0.3
SMARCA2-258ENST00000637103 YTHDC1Q96MU7 727 aaKnown RBP16.93■□□□□ 0.3
SMARCA2-258ENST00000637103 TRIM26Q12899 539 aaPredicted RBP16.81■□□□□ 0.28
SMARCA2-258ENST00000637103 TRIM41Q8WV44 630 aa16.77■□□□□ 0.28
SMARCA2-258ENST00000637103 DAXXQ9UER7 740 aaPredicted RBP16.57■□□□□ 0.24
SMARCA2-258ENST00000637103 UBTFP17480 764 aaKnown RBP16.51■□□□□ 0.23
SMARCA2-258ENST00000637103 RANGAP1P46060 587 aaPredicted RBP16.48■□□□□ 0.23
SMARCA2-258ENST00000637103 RTL5Q5HYW3 569 aaPredicted RBP16.44■□□□□ 0.22
SMARCA2-258ENST00000637103 PPARGC1BQ86YN6 1023 aaKnown RBP16.41■□□□□ 0.22
SMARCA2-258ENST00000637103 DIEXFQ68CQ4 756 aaKnown RBP16.36■□□□□ 0.21
SMARCA2-258ENST00000637103 ATP1B4Q9UN42 357 aaPredicted RBP16.36■□□□□ 0.21
SMARCA2-258ENST00000637103 GTF3C3Q9Y5Q9 886 aa16.26■□□□□ 0.19
SMARCA2-258ENST00000637103 CHIC1Q5VXU3 224 aa16.21■□□□□ 0.19
SMARCA2-258ENST00000637103 ZNF316A6NFI3 1004 aaPredicted RBP16.21■□□□□ 0.18
SMARCA2-258ENST00000637103 LOC105371045A0A1W2PR82 267 aa16.16■□□□□ 0.18
SMARCA2-258ENST00000637103 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.1■□□□□ 0.17
SMARCA2-258ENST00000637103 ACIN1Q9UKV3 1341 aaKnown RBP16.09■□□□□ 0.17
SMARCA2-258ENST00000637103 HNRNPUL2Q1KMD3 747 aaKnown RBP16.09■□□□□ 0.17
SMARCA2-258ENST00000637103 CDK11AQ9UQ88 783 aaPredicted RBP16.06■□□□□ 0.16
SMARCA2-258ENST00000637103 POLR3GLQ9BT43 218 aa16.02■□□□□ 0.15
SMARCA2-258ENST00000637103 ITGAEP38570 1179 aa16.01■□□□□ 0.15
SMARCA2-258ENST00000637103 CLSPNQ9HAW4 1339 aa15.98■□□□□ 0.15
SMARCA2-258ENST00000637103 BCANQ96GW7 911 aa15.97■□□□□ 0.15
SMARCA2-258ENST00000637103 MYT1LQ9UL68 1186 aa15.9■□□□□ 0.14
SMARCA2-258ENST00000637103 ANP32CO43423 234 aa15.85■□□□□ 0.13
SMARCA2-258ENST00000637103 ANP32AP39687 249 aaKnown RBP15.82■□□□□ 0.12
SMARCA2-258ENST00000637103 CNGB1Q14028 1251 aaPredicted RBP15.81■□□□□ 0.12
SMARCA2-258ENST00000637103 GLIPR1L2Q4G1C9 344 aa15.77■□□□□ 0.12
SMARCA2-258ENST00000637103 EIF5BO60841 1220 aaKnown RBP15.7■□□□□ 0.1
SMARCA2-258ENST00000637103 NEUROD1Q13562 356 aa15.65■□□□□ 0.1
SMARCA2-258ENST00000637103 FAM50AQ14320 339 aaKnown RBP15.62■□□□□ 0.09
SMARCA2-258ENST00000637103 SCAF1Q9H7N4 1312 aaKnown RBP15.6■□□□□ 0.09
SMARCA2-258ENST00000637103 FKBP8Q14318 412 aa15.59■□□□□ 0.09
SMARCA2-258ENST00000637103 DCAF1Q9Y4B6 1507 aa15.57■□□□□ 0.08
SMARCA2-258ENST00000637103 SLC4A1APQ9BWU0 796 aaKnown RBP15.56■□□□□ 0.08
SMARCA2-258ENST00000637103 TRIM52Q96A61 297 aa15.55■□□□□ 0.08
SMARCA2-258ENST00000637103 ZBTB47Q9UFB7 747 aaPredicted RBP15.55■□□□□ 0.08
SMARCA2-258ENST00000637103 ANP32BQ92688 251 aaKnown RBP15.54■□□□□ 0.08
SMARCA2-258ENST00000637103 NPM2Q86SE8 214 aaKnown RBP15.53■□□□□ 0.08
SMARCA2-258ENST00000637103 CANXP27824 592 aaKnown RBP15.49■□□□□ 0.07
SMARCA2-258ENST00000637103 ANP32EQ9BTT0 268 aa15.43■□□□□ 0.06
SMARCA2-258ENST00000637103 NBR1Q14596 966 aa15.4■□□□□ 0.06
SMARCA2-258ENST00000637103 UPF2Q9HAU5 1272 aaKnown RBP15.37■□□□□ 0.05
SMARCA2-258ENST00000637103 ZNF326Q5BKZ1 582 aaKnown RBP15.35■□□□□ 0.05
SMARCA2-258ENST00000637103 HNRNPUQ00839 825 aaKnown RBP eCLIP15.34■□□□□ 0.05
SMARCA2-258ENST00000637103 CCDC136Q96JN2 1154 aa15.3■□□□□ 0.04
SMARCA2-258ENST00000637103 HSP90AA1P07900 732 aaKnown RBP15.29■□□□□ 0.04
SMARCA2-258ENST00000637103 NEFMP07197 916 aa15.24■□□□□ 0.03
SMARCA2-258ENST00000637103 TONSLQ96HA7 1378 aa15.23■□□□□ 0.03
SMARCA2-258ENST00000637103 MIER1Q8N108 512 aa15.23■□□□□ 0.03
SMARCA2-258ENST00000637103 DDX10Q13206 875 aaKnown RBP15.23■□□□□ 0.03
SMARCA2-258ENST00000637103 DDRGK1Q96HY6 314 aa15.23■□□□□ 0.03
SMARCA2-258ENST00000637103 CSRNP3Q8WYN3 585 aa15.19■□□□□ 0.02
SMARCA2-258ENST00000637103 FAM9BQ8IZU0 186 aa15.19■□□□□ 0.02
SMARCA2-258ENST00000637103 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.18■□□□□ 0.02
SMARCA2-258ENST00000637103 BCL11AQ9H165 835 aa15.14■□□□□ 0.01
SMARCA2-258ENST00000637103 TNNT2P45379 298 aaPredicted RBP15.12■□□□□ 0.01
SMARCA2-258ENST00000637103 ERICH6BQ5W0A0 696 aa15.12■□□□□ 0.01
SMARCA2-258ENST00000637103 PPM1GO15355 546 aaPredicted RBP15.11■□□□□ 0.01
SMARCA2-258ENST00000637103 CCDC180Q9P1Z9 1646 aa15.11■□□□□ 0.01
SMARCA2-258ENST00000637103 TRIM44Q96DX7 344 aaPredicted RBP15.1■□□□□ 0.01
SMARCA2-258ENST00000637103 BECN1Q14457 450 aa15.1■□□□□ 0.01
SMARCA2-258ENST00000637103 ARXQ96QS3 562 aa15.09■□□□□ 0.01
SMARCA2-258ENST00000637103 TMC1Q8TDI8 760 aa15.06■□□□□ 0
SMARCA2-258ENST00000637103 MRS2Q9HD23 443 aa15.06■□□□□ 0
SMARCA2-258ENST00000637103 IRX6P78412 446 aaPredicted RBP15.05■□□□□ -0
SMARCA2-258ENST00000637103 NOP58Q9Y2X3 529 aaKnown RBP15.01□□□□□ -0.01
SMARCA2-258ENST00000637103 SLC24A1O60721 1099 aa14.98□□□□□ -0.01
SMARCA2-258ENST00000637103 GOLGA6L22H0YM25 854 aa14.98□□□□□ -0.01
SMARCA2-258ENST00000637103 SUPT16HQ9Y5B9 1047 aaKnown RBP14.97□□□□□ -0.01
SMARCA2-258ENST00000637103 NAP1L5Q96NT1 182 aaPredicted RBP14.97□□□□□ -0.01
SMARCA2-258ENST00000637103 SALL2Q9Y467 1007 aaPredicted RBP14.96□□□□□ -0.02
SMARCA2-258ENST00000637103 WDR43Q15061 677 aaKnown RBP eCLIP14.95□□□□□ -0.02
SMARCA2-258ENST00000637103 PPP4R2Q9NY27 417 aa14.95□□□□□ -0.02
SMARCA2-258ENST00000637103 NCLP19338 710 aaKnown RBP14.92□□□□□ -0.02
SMARCA2-258ENST00000637103 RTN4Q9NQC3 1192 aaKnown RBP14.92□□□□□ -0.02
SMARCA2-258ENST00000637103 DEKP35659 375 aaKnown RBP14.91□□□□□ -0.02
SMARCA2-258ENST00000637103 P3H3Q8IVL6 736 aa14.91□□□□□ -0.02
SMARCA2-258ENST00000637103 EIF4G2P78344 907 aaKnown RBP eCLIP14.87□□□□□ -0.034e-7■■■■□ 19.9
SMARCA2-258ENST00000637103 PTMAP06454 111 aaKnown RBP14.86□□□□□ -0.03
SMARCA2-258ENST00000637103 MYH16Q9H6N6 1097 aa14.86□□□□□ -0.03
SMARCA2-258ENST00000637103 LAS1LQ9Y4W2 734 aaKnown RBP14.85□□□□□ -0.03
SMARCA2-258ENST00000637103 MYO15BQ96JP2 1530 aa14.84□□□□□ -0.03
SMARCA2-258ENST00000637103 ZNF777Q9ULD5 760 aaPredicted RBP14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms