RNA–Protein interactions for RNA: ENST00000542328.5

ABCB8-222, Transcript of ATP binding cassette subfamily B member 8, humanhuman

TSL 2 BASIC

Gene ABCB8, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB8-222ENST00000542328 NISCHQ9Y2I1 1504 aa24.66■■□□□ 1.54
ABCB8-222ENST00000542328 DCAF8L2P0C7V8 631 aa22.9■■□□□ 1.26
ABCB8-222ENST00000542328 SHROOM4Q9ULL8 1493 aa21.59■■□□□ 1.05
ABCB8-222ENST00000542328 SUPT5HO00267 1087 aaKnown RBP21.29■■□□□ 1
ABCB8-222ENST00000542328 ABCC9O60706 1549 aa21.15■□□□□ 0.98
ABCB8-222ENST00000542328 CCDC180Q9P1Z9 1646 aa21■□□□□ 0.95
ABCB8-222ENST00000542328 ZCCHC6Q5VYS8 1495 aaKnown RBP20.49■□□□□ 0.87
ABCB8-222ENST00000542328 PABPN1Q86U42 306 aaKnown RBP eCLIP20.4■□□□□ 0.86
ABCB8-222ENST00000542328 RB1CC1Q8TDY2 1594 aa20.17■□□□□ 0.82
ABCB8-222ENST00000542328 NACADO15069 1562 aa20.11■□□□□ 0.81
ABCB8-222ENST00000542328 SCRIBQ14160 1630 aa20.09■□□□□ 0.81
ABCB8-222ENST00000542328 DCAF1Q9Y4B6 1507 aa19.96■□□□□ 0.79
ABCB8-222ENST00000542328 TRIM41Q8WV44 630 aa19.94■□□□□ 0.78
ABCB8-222ENST00000542328 EHMT2Q96KQ7 1210 aa19.93■□□□□ 0.78
ABCB8-222ENST00000542328 FAM9AQ8IZU1 332 aaPredicted RBP19.87■□□□□ 0.77
ABCB8-222ENST00000542328 MYO15BQ96JP2 1530 aa19.67■□□□□ 0.74
ABCB8-222ENST00000542328 APLP2Q06481 763 aa19.55■□□□□ 0.72
ABCB8-222ENST00000542328 UBTFP17480 764 aaKnown RBP19.47■□□□□ 0.71
ABCB8-222ENST00000542328 CHIC1Q5VXU3 224 aa19.46■□□□□ 0.71
ABCB8-222ENST00000542328 RANGAP1P46060 587 aaPredicted RBP19.41■□□□□ 0.7
ABCB8-222ENST00000542328 RSF1Q96T23 1441 aaPredicted RBP19.32■□□□□ 0.68
ABCB8-222ENST00000542328 BAZ1AQ9NRL2 1556 aaPredicted RBP19.29■□□□□ 0.68
ABCB8-222ENST00000542328 CECR2Q9BXF3 1484 aa19.23■□□□□ 0.67
ABCB8-222ENST00000542328 ATP1B4Q9UN42 357 aaPredicted RBP19.2■□□□□ 0.66
ABCB8-222ENST00000542328 BAZ1BQ9UIG0 1483 aaKnown RBP19.2■□□□□ 0.66
ABCB8-222ENST00000542328 PCGF6Q9BYE7 350 aa19.11■□□□□ 0.65
ABCB8-222ENST00000542328 TTBK1Q5TCY1 1321 aaPredicted RBP19.09■□□□□ 0.65
ABCB8-222ENST00000542328 MROH2BQ7Z745 1585 aa19.02■□□□□ 0.64
ABCB8-222ENST00000542328 LOC105371045A0A1W2PR82 267 aa19■□□□□ 0.63
ABCB8-222ENST00000542328 SMARCA2P51531 1590 aa18.98■□□□□ 0.63
ABCB8-222ENST00000542328 FBLN2P98095 1184 aa18.88■□□□□ 0.61
ABCB8-222ENST00000542328 CSRNP3Q8WYN3 585 aa18.87■□□□□ 0.61
ABCB8-222ENST00000542328 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.84■□□□□ 0.61
ABCB8-222ENST00000542328 HNRNPUL2Q1KMD3 747 aaKnown RBP18.84■□□□□ 0.61
ABCB8-222ENST00000542328 SMARCA4P51532 1647 aa18.81■□□□□ 0.6
ABCB8-222ENST00000542328 ATAD2BQ9ULI0 1458 aa18.8■□□□□ 0.6
ABCB8-222ENST00000542328 WIZO95785 1651 aa18.74■□□□□ 0.59
ABCB8-222ENST00000542328 TOP2AP11388 1531 aaKnown RBP18.73■□□□□ 0.59
ABCB8-222ENST00000542328 CCDC88BA6NC98 1476 aa18.72■□□□□ 0.59
ABCB8-222ENST00000542328 WRNQ14191 1432 aaPredicted RBP eCLIP18.72■□□□□ 0.59
ABCB8-222ENST00000542328 ERCC6Q03468 1493 aa18.71■□□□□ 0.59
ABCB8-222ENST00000542328 PPARGC1BQ86YN6 1023 aaKnown RBP18.71■□□□□ 0.59
ABCB8-222ENST00000542328 EIF4G1Q04637 1599 aaKnown RBP18.65■□□□□ 0.58
ABCB8-222ENST00000542328 PDS5BQ9NTI5 1447 aa18.62■□□□□ 0.57
ABCB8-222ENST00000542328 CCER1Q8TC90 406 aaPredicted RBP18.6■□□□□ 0.57
ABCB8-222ENST00000542328 CADPSQ9ULU8 1353 aa18.58■□□□□ 0.57
ABCB8-222ENST00000542328 BICRAQ9NZM4 1560 aa18.57■□□□□ 0.56
ABCB8-222ENST00000542328 NCAPD3P42695 1498 aa18.57■□□□□ 0.56
ABCB8-222ENST00000542328 EEA1Q15075 1411 aa18.53■□□□□ 0.56
ABCB8-222ENST00000542328 ZEB1P37275 1124 aaPredicted RBP18.52■□□□□ 0.56
ABCB8-222ENST00000542328 CHMP7Q8WUX9 453 aaPredicted RBP18.52■□□□□ 0.55
ABCB8-222ENST00000542328 TRIM26Q12899 539 aaPredicted RBP18.51■□□□□ 0.55
ABCB8-222ENST00000542328 P3H3Q8IVL6 736 aa18.51■□□□□ 0.55
ABCB8-222ENST00000542328 KIF27Q86VH2 1401 aa18.49■□□□□ 0.55
ABCB8-222ENST00000542328 MYT1LQ9UL68 1186 aa18.47■□□□□ 0.55
ABCB8-222ENST00000542328 ITGAEP38570 1179 aa18.45■□□□□ 0.54
ABCB8-222ENST00000542328 CC2D2AQ9P2K1 1620 aa18.39■□□□□ 0.53
ABCB8-222ENST00000542328 UNC13AQ9UPW8 1703 aa18.36■□□□□ 0.53
ABCB8-222ENST00000542328 CEP164Q9UPV0 1460 aa18.35■□□□□ 0.53
ABCB8-222ENST00000542328 CUX2O14529 1486 aa18.33■□□□□ 0.53
ABCB8-222ENST00000542328 ABCC8Q09428 1581 aa18.33■□□□□ 0.52
ABCB8-222ENST00000542328 CDK11AQ9UQ88 783 aaPredicted RBP18.32■□□□□ 0.52
ABCB8-222ENST00000542328 HMGXB3Q12766 1538 aa18.32■□□□□ 0.52
ABCB8-222ENST00000542328 FANCD2Q9BXW9 1451 aa18.31■□□□□ 0.52
ABCB8-222ENST00000542328 GOLGA3Q08378 1498 aa18.3■□□□□ 0.52
ABCB8-222ENST00000542328 ARID3CA6NKF2 412 aa18.3■□□□□ 0.52
ABCB8-222ENST00000542328 SOGA1O94964 1423 aa18.3■□□□□ 0.52
ABCB8-222ENST00000542328 FAM50AQ14320 339 aaKnown RBP18.3■□□□□ 0.52
ABCB8-222ENST00000542328 NPM1P06748 294 aaKnown RBP eCLIP18.25■□□□□ 0.51
ABCB8-222ENST00000542328 CARMIL1Q5VZK9 1371 aa18.22■□□□□ 0.51
ABCB8-222ENST00000542328 CLIP1P30622 1438 aa18.22■□□□□ 0.51
ABCB8-222ENST00000542328 TDRD9Q8NDG6 1382 aaKnown RBP18.2■□□□□ 0.5
ABCB8-222ENST00000542328 PELP1Q8IZL8 1130 aaKnown RBP18.19■□□□□ 0.5
ABCB8-222ENST00000542328 HRCP23327 699 aa18.17■□□□□ 0.5
ABCB8-222ENST00000542328 DNAJC5BQ9UF47 199 aa18.16■□□□□ 0.5
ABCB8-222ENST00000542328 TNIKQ9UKE5 1360 aa18.14■□□□□ 0.5
ABCB8-222ENST00000542328 CFTRP13569 1480 aa18.14■□□□□ 0.49
ABCB8-222ENST00000542328 CENPBP07199 599 aaPredicted RBP18.11■□□□□ 0.49
ABCB8-222ENST00000542328 CEP162Q5TB80 1403 aa18.09■□□□□ 0.49
ABCB8-222ENST00000542328 PEG3Q9GZU2 1588 aa18.07■□□□□ 0.48
ABCB8-222ENST00000542328 NESP48681 1621 aa18.06■□□□□ 0.48
ABCB8-222ENST00000542328 ZNF777Q9ULD5 760 aaPredicted RBP18.05■□□□□ 0.48
ABCB8-222ENST00000542328 MTUS2Q5JR59 1369 aa18.02■□□□□ 0.48
ABCB8-222ENST00000542328 TRIM52Q96A61 297 aa18.02■□□□□ 0.48
ABCB8-222ENST00000542328 FGD5Q6ZNL6 1462 aa18.01■□□□□ 0.47
ABCB8-222ENST00000542328 PLEKHD1A6NEE1 506 aa17.96■□□□□ 0.47
ABCB8-222ENST00000542328 MRC2Q9UBG0 1479 aa17.93■□□□□ 0.46
ABCB8-222ENST00000542328 RAPGEF2Q9Y4G8 1499 aa17.93■□□□□ 0.46
ABCB8-222ENST00000542328 YTHDC1Q96MU7 727 aaKnown RBP17.93■□□□□ 0.46
ABCB8-222ENST00000542328 LAMC3Q9Y6N6 1575 aa17.92■□□□□ 0.46
ABCB8-222ENST00000542328 RAD54L2Q9Y4B4 1467 aa17.91■□□□□ 0.46
ABCB8-222ENST00000542328 CARMIL2Q6F5E8 1435 aa17.9■□□□□ 0.46
ABCB8-222ENST00000542328 FHAD1B1AJZ9 1412 aa17.89■□□□□ 0.45
ABCB8-222ENST00000542328 GAPVD1Q14C86 1478 aa17.89■□□□□ 0.45
ABCB8-222ENST00000542328 KCNH8Q96L42 1107 aa17.86■□□□□ 0.45
ABCB8-222ENST00000542328 RUSC2Q8N2Y8 1516 aa17.84■□□□□ 0.45
ABCB8-222ENST00000542328 TOPBP1Q92547 1522 aa17.84■□□□□ 0.45
ABCB8-222ENST00000542328 IGF1RP08069 1367 aa17.82■□□□□ 0.44
ABCB8-222ENST00000542328 TSPY4P0CV99 314 aa17.81■□□□□ 0.44
ABCB8-222ENST00000542328 TSPY10P0CW01 314 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms