Protein–RNA interactions for Protein: Q9Y2R4

DDX52, Probable ATP-dependent RNA helicase DDX52, humanhuman

Known RBP eCLIP

Length 599 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX52Q9Y2R4 C17orf62-232ENST00000584024 1965 ntTSL 218.84■□□□□ 0.617e-6■■□□□ 13.7
DDX52Q9Y2R4 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.567e-6■■□□□ 13.7
DDX52Q9Y2R4 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.547e-6■■□□□ 13.7
DDX52Q9Y2R4 NFE2-205ENST00000553198 1208 ntTSL 518.3■□□□□ 0.527e-6■■□□□ 13.7
DDX52Q9Y2R4 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.57e-6■■□□□ 13.7
DDX52Q9Y2R4 C17orf62-212ENST00000577888 617 ntTSL 218.2■□□□□ 0.57e-6■■□□□ 13.7
DDX52Q9Y2R4 ITGA5-202ENST00000435631 1240 ntTSL 217.67■□□□□ 0.427e-6■■□□□ 13.7
DDX52Q9Y2R4 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.387e-6■■□□□ 13.7
DDX52Q9Y2R4 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.387e-6■■□□□ 13.7
DDX52Q9Y2R4 C17orf62-235ENST00000584791 559 ntTSL 217.4■□□□□ 0.387e-6■■□□□ 13.7
DDX52Q9Y2R4 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.357e-6■■□□□ 13.7
DDX52Q9Y2R4 ZMYND11-211ENST00000439456 762 ntTSL 417.08■□□□□ 0.327e-6■■□□□ 13.7
DDX52Q9Y2R4 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.327e-6■■□□□ 13.7
DDX52Q9Y2R4 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.37e-6■■□□□ 13.7
DDX52Q9Y2R4 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.287e-6■■□□□ 13.7
DDX52Q9Y2R4 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.287e-6■■□□□ 13.7
DDX52Q9Y2R4 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.257e-6■■□□□ 13.7
DDX52Q9Y2R4 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.167e-6■■□□□ 13.7
DDX52Q9Y2R4 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.157e-6■■□□□ 13.7
DDX52Q9Y2R4 TSC2-213ENST00000483020 563 ntTSL 415.68■□□□□ 0.17e-6■■□□□ 13.7
DDX52Q9Y2R4 MAN2A2-203ENST00000557990 956 ntTSL 515.64■□□□□ 0.097e-6■■□□□ 13.7
DDX52Q9Y2R4 TSC2-206ENST00000439117 5073 ntTSL 1 (best)15.57■□□□□ 0.087e-6■■□□□ 13.7
DDX52Q9Y2R4 MAN2A2-212ENST00000559341 623 ntTSL 215.42■□□□□ 0.067e-6■■□□□ 13.7
DDX52Q9Y2R4 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.057e-6■■□□□ 13.7
DDX52Q9Y2R4 SQSTM1-201ENST00000360718 2253 ntTSL 1 (best) BASIC15.36■□□□□ 0.057e-6■■□□□ 13.7
DDX52Q9Y2R4 SH2B1-211ENST00000566209 533 ntTSL 415.34■□□□□ 0.052e-7■■□□□ 13.7
DDX52Q9Y2R4 MAN2A2-202ENST00000557865 2671 ntTSL 214.33□□□□□ -0.127e-6■■□□□ 13.7
DDX52Q9Y2R4 TSC2-212ENST00000471143 577 ntTSL 414.29□□□□□ -0.127e-6■■□□□ 13.7
DDX52Q9Y2R4 C17orf62-234ENST00000584503 584 ntTSL 2 BASIC14.11□□□□□ -0.157e-6■■□□□ 13.7
DDX52Q9Y2R4 ZMYND11-205ENST00000381607 3898 ntTSL 1 (best) BASIC14.06□□□□□ -0.167e-6■■□□□ 13.7
DDX52Q9Y2R4 SQSTM1-206ENST00000466342 808 ntTSL 214.01□□□□□ -0.177e-6■■□□□ 13.7
DDX52Q9Y2R4 SCAF8-203ENST00000417268 4944 ntTSL 2 BASIC13.82□□□□□ -0.27e-6■■□□□ 13.7
DDX52Q9Y2R4 ITGA5-201ENST00000293379 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.217e-6■■□□□ 13.7
DDX52Q9Y2R4 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.213e-6■■□□□ 13.7
DDX52Q9Y2R4 CTBP2-213ENST00000530930 425 ntTSL 513.64□□□□□ -0.237e-6■■□□□ 13.7
DDX52Q9Y2R4 STAU1-203ENST00000360426 3211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.247e-6■■□□□ 13.7
DDX52Q9Y2R4 MAN2A2-230ENST00000561448 1443 ntTSL 213.39□□□□□ -0.277e-6■■□□□ 13.7
DDX52Q9Y2R4 ZMYND11-203ENST00000381591 4229 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.37e-6■■□□□ 13.7
DDX52Q9Y2R4 STAU1-205ENST00000371802 3154 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.337e-6■■□□□ 13.7
DDX52Q9Y2R4 C17orf62-215ENST00000578913 563 ntTSL 2 BASIC12.82□□□□□ -0.367e-6■■□□□ 13.7
DDX52Q9Y2R4 C17orf62-231ENST00000583778 481 ntTSL 212.82□□□□□ -0.367e-6■■□□□ 13.7
DDX52Q9Y2R4 MAN2A2-204ENST00000558161 4918 ntTSL 1 (best)12.64□□□□□ -0.397e-6■■□□□ 13.7
DDX52Q9Y2R4 HIVEP1-209ENST00000627968 8924 ntTSL 5 BASIC12.48□□□□□ -0.417e-6■■□□□ 13.7
DDX52Q9Y2R4 HIVEP1-201ENST00000379388 9027 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.427e-6■■□□□ 13.7
DDX52Q9Y2R4 HIVEP1-208ENST00000541134 9023 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.427e-6■■□□□ 13.7
DDX52Q9Y2R4 ZMYND11-201ENST00000309776 4228 ntTSL 2 BASIC12.41□□□□□ -0.427e-6■■□□□ 13.7
DDX52Q9Y2R4 GAK-210ENST00000507991 328 ntTSL 512.4□□□□□ -0.427e-6■■□□□ 13.7
DDX52Q9Y2R4 C17orf62-233ENST00000584408 497 ntTSL 412.38□□□□□ -0.437e-6■■□□□ 13.7
DDX52Q9Y2R4 C17orf62-211ENST00000577834 540 ntTSL 412.37□□□□□ -0.437e-6■■□□□ 13.7
DDX52Q9Y2R4 DDX3X-215ENST00000625837 3237 ntTSL 5 BASIC12.07□□□□□ -0.483e-6■■□□□ 13.7
DDX52Q9Y2R4 STAU1-201ENST00000340954 3334 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.487e-6■■□□□ 13.7
DDX52Q9Y2R4 ZMYND11-207ENST00000397959 4138 ntTSL 2 BASIC12.05□□□□□ -0.487e-6■■□□□ 13.7
DDX52Q9Y2R4 DDX3X-216ENST00000626301 3013 ntTSL 5 BASIC12.01□□□□□ -0.493e-6■■□□□ 13.7
DDX52Q9Y2R4 C17orf62-220ENST00000580560 564 ntTSL 4 BASIC11.86□□□□□ -0.517e-6■■□□□ 13.7
DDX52Q9Y2R4 LRP5L-205ENST00000468442 600 ntTSL 311.84□□□□□ -0.517e-6■■□□□ 13.7
DDX52Q9Y2R4 STAU1-202ENST00000347458 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.537e-6■■□□□ 13.7
DDX52Q9Y2R4 STAU1-204ENST00000371792 3130 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.537e-6■■□□□ 13.7
DDX52Q9Y2R4 PTDSS2-210ENST00000530087 596 ntTSL 211.6□□□□□ -0.557e-6■■□□□ 13.7
DDX52Q9Y2R4 DDX3X-203ENST00000457138 5346 ntTSL 2 BASIC11.27□□□□□ -0.613e-6■■□□□ 13.7
DDX52Q9Y2R4 MAN2A2-201ENST00000360468 6268 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.617e-6■■□□□ 13.7
DDX52Q9Y2R4 DDX3X-220ENST00000630370 3120 ntTSL 511.1□□□□□ -0.633e-6■■□□□ 13.7
DDX52Q9Y2R4 DDX3X-219ENST00000630255 3289 ntTSL 511.05□□□□□ -0.643e-6■■□□□ 13.7
DDX52Q9Y2R4 DDX3X-218ENST00000629785 3457 ntTSL 511.03□□□□□ -0.643e-6■■□□□ 13.7
DDX52Q9Y2R4 STAU1-207ENST00000371856 3684 ntAPPRIS P4 TSL 1 (best) BASIC10.93□□□□□ -0.667e-6■■□□□ 13.7
DDX52Q9Y2R4 MAN2A2-226ENST00000560926 569 ntTSL 410.91□□□□□ -0.667e-6■■□□□ 13.7
DDX52Q9Y2R4 STAU1-206ENST00000371828 3411 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.687e-6■■□□□ 13.7
DDX52Q9Y2R4 DDX3X-204ENST00000478993 3397 ntTSL 1 (best)10.72□□□□□ -0.693e-6■■□□□ 13.7
DDX52Q9Y2R4 DDX3X-217ENST00000629496 5023 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.73e-6■■□□□ 13.7
DDX52Q9Y2R4 DDX3X-221ENST00000630858 3181 ntTSL 510.65□□□□□ -0.73e-6■■□□□ 13.7
DDX52Q9Y2R4 MAN2A2-219ENST00000560147 492 ntTSL 410.64□□□□□ -0.717e-6■■□□□ 13.7
DDX52Q9Y2R4 SCAF8-202ENST00000367186 4908 ntTSL 2 BASIC10.56□□□□□ -0.727e-6■■□□□ 13.7
DDX52Q9Y2R4 DHX9-201ENST00000367549 4240 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.817e-6■■□□□ 13.7
DDX52Q9Y2R4 DDX3X-211ENST00000615742 485 ntTSL 49.77□□□□□ -0.853e-6■■□□□ 13.7
DDX52Q9Y2R4 DDX3X-202ENST00000441189 1051 ntTSL 2 BASIC9.77□□□□□ -0.853e-6■■□□□ 13.7
DDX52Q9Y2R4 DDX3X-222ENST00000631641 583 ntTSL 39.77□□□□□ -0.853e-6■■□□□ 13.7
DDX52Q9Y2R4 DDX3X-205ENST00000480592 1001 ntTSL 1 (best)9.05□□□□□ -0.963e-6■■□□□ 13.7
DDX52Q9Y2R4 C17orf62-236ENST00000584891 468 ntTSL 38.96□□□□□ -0.987e-6■■□□□ 13.7
DDX52Q9Y2R4 MAN2A2-225ENST00000560880 718 ntTSL 28.88□□□□□ -0.997e-6■■□□□ 13.7
DDX52Q9Y2R4 HIVEP1-206ENST00000487103 585 ntTSL 28.55□□□□□ -1.047e-6■■□□□ 13.7
DDX52Q9Y2R4 DDX3X-207ENST00000610559 542 ntTSL 48.46□□□□□ -1.063e-6■■□□□ 13.7
DDX52Q9Y2R4 ZMYND11-204ENST00000381604 4066 ntTSL 5 BASIC8.42□□□□□ -1.067e-6■■□□□ 13.7
DDX52Q9Y2R4 MAN2A2-208ENST00000558538 576 ntTSL 48.15□□□□□ -1.17e-6■■□□□ 13.7
DDX52Q9Y2R4 HIVEP1-207ENST00000491710 579 ntTSL 35.96□□□□□ -1.467e-6■■□□□ 13.7
DDX52Q9Y2R4 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC5.76□□□□□ -1.497e-6■■□□□ 13.7
DDX52Q9Y2R4 ZNF276-206ENST00000563983 3403 ntTSL 212.97□□□□□ -0.333e-6■■□□□ 13.6
DDX52Q9Y2R4 CYBRD1-207ENST00000494587 549 ntTSL 421.04■□□□□ 0.963e-6■■□□□ 13.5
DDX52Q9Y2R4 CYBRD1-205ENST00000468308 763 ntTSL 318.96■□□□□ 0.633e-6■■□□□ 13.5
DDX52Q9Y2R4 CYBRD1-206ENST00000474182 465 ntTSL 517.96■□□□□ 0.473e-6■■□□□ 13.5
DDX52Q9Y2R4 CYBRD1-202ENST00000375252 3540 ntTSL 1 (best) BASIC13.28□□□□□ -0.283e-6■■□□□ 13.5
DDX52Q9Y2R4 CYBRD1-201ENST00000321348 4365 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.583e-6■■□□□ 13.5
DDX52Q9Y2R4 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC7.81□□□□□ -1.163e-6■■□□□ 13.5
DDX52Q9Y2R4 PTBP1-212ENST00000587136 583 ntTSL 325.03■■□□□ 1.65e-6■■□□□ 13.5
DDX52Q9Y2R4 PTBP1-207ENST00000585932 1030 ntTSL 324.85■■□□□ 1.575e-6■■□□□ 13.5
DDX52Q9Y2R4 PTBP1-219ENST00000621737 1125 ntTSL 523.4■■□□□ 1.345e-6■■□□□ 13.5
DDX52Q9Y2R4 PTBP1-208ENST00000585956 767 ntTSL 323.28■■□□□ 1.325e-6■■□□□ 13.5
DDX52Q9Y2R4 PTBP1-215ENST00000589883 683 ntTSL 322.87■■□□□ 1.255e-6■■□□□ 13.5
DDX52Q9Y2R4 PTBP1-205ENST00000585535 314 ntTSL 313.61□□□□□ -0.235e-6■■□□□ 13.5
DDX52Q9Y2R4 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC34.08■■■■□ 3.055e-6■■□□□ 13.5
DDX52Q9Y2R4 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.795e-6■■□□□ 13.5
DDX52Q9Y2R4 AGAP1-214ENST00000635100 2478 ntTSL 517.39■□□□□ 0.375e-6■■□□□ 13.5
Retrieved 100 of 4,483 protein–RNA pairs in 71.2 ms