Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC47A1Q96FL8 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
SLC47A1Q96FL8 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
SLC47A1Q96FL8 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC47A1Q96FL8 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.99■□□□□ 0.95
SLC47A1Q96FL8 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC47A1Q96FL8 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.99■□□□□ 0.95
SLC47A1Q96FL8 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.99■□□□□ 0.95
SLC47A1Q96FL8 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SLC47A1Q96FL8 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLC47A1Q96FL8 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLC47A1Q96FL8 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.98■□□□□ 0.95
SLC47A1Q96FL8 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLC47A1Q96FL8 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLC47A1Q96FL8 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLC47A1Q96FL8 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLC47A1Q96FL8 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.98■□□□□ 0.95
SLC47A1Q96FL8 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLC47A1Q96FL8 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.98■□□□□ 0.95
SLC47A1Q96FL8 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLC47A1Q96FL8 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SLC47A1Q96FL8 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLC47A1Q96FL8 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.97■□□□□ 0.95
SLC47A1Q96FL8 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SLC47A1Q96FL8 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.97■□□□□ 0.95
SLC47A1Q96FL8 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SLC47A1Q96FL8 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.97■□□□□ 0.95
SLC47A1Q96FL8 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SLC47A1Q96FL8 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
SLC47A1Q96FL8 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC20.97■□□□□ 0.95
SLC47A1Q96FL8 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.97■□□□□ 0.95
SLC47A1Q96FL8 AC012354.3-201ENST00000623734 483 ntBASIC20.97■□□□□ 0.95
SLC47A1Q96FL8 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SLC47A1Q96FL8 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SLC47A1Q96FL8 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SLC47A1Q96FL8 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SLC47A1Q96FL8 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SLC47A1Q96FL8 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SLC47A1Q96FL8 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
SLC47A1Q96FL8 AC079630.1-202ENST00000618127 1840 ntBASIC20.97■□□□□ 0.95
SLC47A1Q96FL8 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SLC47A1Q96FL8 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SLC47A1Q96FL8 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SLC47A1Q96FL8 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.96■□□□□ 0.95
SLC47A1Q96FL8 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.96■□□□□ 0.95
SLC47A1Q96FL8 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
SLC47A1Q96FL8 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.96■□□□□ 0.95
SLC47A1Q96FL8 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SLC47A1Q96FL8 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SLC47A1Q96FL8 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.96■□□□□ 0.95
SLC47A1Q96FL8 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SLC47A1Q96FL8 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.96■□□□□ 0.95
SLC47A1Q96FL8 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
SLC47A1Q96FL8 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
SLC47A1Q96FL8 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
SLC47A1Q96FL8 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SLC47A1Q96FL8 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
SLC47A1Q96FL8 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SLC47A1Q96FL8 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.95■□□□□ 0.94
SLC47A1Q96FL8 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.95■□□□□ 0.94
SLC47A1Q96FL8 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SLC47A1Q96FL8 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
SLC47A1Q96FL8 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SLC47A1Q96FL8 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SLC47A1Q96FL8 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.95■□□□□ 0.94
SLC47A1Q96FL8 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.95■□□□□ 0.94
SLC47A1Q96FL8 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SLC47A1Q96FL8 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
SLC47A1Q96FL8 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SLC47A1Q96FL8 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.94■□□□□ 0.94
SLC47A1Q96FL8 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SLC47A1Q96FL8 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SLC47A1Q96FL8 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.94■□□□□ 0.94
SLC47A1Q96FL8 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
SLC47A1Q96FL8 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
SLC47A1Q96FL8 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.94■□□□□ 0.94
SLC47A1Q96FL8 GUK1-208ENST00000366728 842 ntTSL 2 BASIC20.94■□□□□ 0.94
SLC47A1Q96FL8 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC20.94■□□□□ 0.94
SLC47A1Q96FL8 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
SLC47A1Q96FL8 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.94■□□□□ 0.94
SLC47A1Q96FL8 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.94■□□□□ 0.94
SLC47A1Q96FL8 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SLC47A1Q96FL8 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SLC47A1Q96FL8 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.94■□□□□ 0.94
SLC47A1Q96FL8 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SLC47A1Q96FL8 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SLC47A1Q96FL8 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
SLC47A1Q96FL8 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
SLC47A1Q96FL8 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SLC47A1Q96FL8 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC20.93■□□□□ 0.94
SLC47A1Q96FL8 AC010980.1-201ENST00000587192 1142 ntBASIC20.93■□□□□ 0.94
SLC47A1Q96FL8 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SLC47A1Q96FL8 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SLC47A1Q96FL8 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.93■□□□□ 0.94
SLC47A1Q96FL8 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SLC47A1Q96FL8 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SLC47A1Q96FL8 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.92■□□□□ 0.94
SLC47A1Q96FL8 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.92■□□□□ 0.94
SLC47A1Q96FL8 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
SLC47A1Q96FL8 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms