Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
PTCD2Q8WV60 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
PTCD2Q8WV60 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
PTCD2Q8WV60 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC22.6■■□□□ 1.21
PTCD2Q8WV60 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC22.6■■□□□ 1.21
PTCD2Q8WV60 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PTCD2Q8WV60 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PTCD2Q8WV60 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC22.59■■□□□ 1.21
PTCD2Q8WV60 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC22.59■■□□□ 1.21
PTCD2Q8WV60 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
PTCD2Q8WV60 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PTCD2Q8WV60 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC22.58■■□□□ 1.21
PTCD2Q8WV60 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
PTCD2Q8WV60 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
PTCD2Q8WV60 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PTCD2Q8WV60 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
PTCD2Q8WV60 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
PTCD2Q8WV60 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
PTCD2Q8WV60 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC22.58■■□□□ 1.2
PTCD2Q8WV60 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PTCD2Q8WV60 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PTCD2Q8WV60 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
PTCD2Q8WV60 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC22.57■■□□□ 1.2
PTCD2Q8WV60 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PTCD2Q8WV60 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
PTCD2Q8WV60 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC22.57■■□□□ 1.2
PTCD2Q8WV60 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC22.57■■□□□ 1.2
PTCD2Q8WV60 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC22.57■■□□□ 1.2
PTCD2Q8WV60 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC22.57■■□□□ 1.2
PTCD2Q8WV60 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PTCD2Q8WV60 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC22.57■■□□□ 1.2
PTCD2Q8WV60 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
PTCD2Q8WV60 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PTCD2Q8WV60 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PTCD2Q8WV60 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
PTCD2Q8WV60 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PTCD2Q8WV60 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PTCD2Q8WV60 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PTCD2Q8WV60 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PTCD2Q8WV60 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC22.56■■□□□ 1.2
PTCD2Q8WV60 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC22.56■■□□□ 1.2
PTCD2Q8WV60 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PTCD2Q8WV60 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PTCD2Q8WV60 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PTCD2Q8WV60 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PTCD2Q8WV60 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
PTCD2Q8WV60 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PTCD2Q8WV60 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
PTCD2Q8WV60 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PTCD2Q8WV60 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PTCD2Q8WV60 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PTCD2Q8WV60 GCA-201ENST00000233612 1694 ntTSL 2 BASIC22.55■■□□□ 1.2
PTCD2Q8WV60 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PTCD2Q8WV60 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PTCD2Q8WV60 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC22.54■■□□□ 1.2
PTCD2Q8WV60 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PTCD2Q8WV60 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
PTCD2Q8WV60 AC144652.1-201ENST00000609974 1624 ntBASIC22.54■■□□□ 1.2
PTCD2Q8WV60 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PTCD2Q8WV60 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC22.54■■□□□ 1.2
PTCD2Q8WV60 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
PTCD2Q8WV60 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PTCD2Q8WV60 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PTCD2Q8WV60 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PTCD2Q8WV60 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PTCD2Q8WV60 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PTCD2Q8WV60 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC22.53■■□□□ 1.2
PTCD2Q8WV60 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC22.53■■□□□ 1.2
PTCD2Q8WV60 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC22.53■■□□□ 1.2
PTCD2Q8WV60 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PTCD2Q8WV60 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC22.53■■□□□ 1.2
PTCD2Q8WV60 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
PTCD2Q8WV60 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PTCD2Q8WV60 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PTCD2Q8WV60 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC22.52■■□□□ 1.2
PTCD2Q8WV60 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
PTCD2Q8WV60 AL353803.4-201ENST00000565882 1934 ntBASIC22.52■■□□□ 1.2
PTCD2Q8WV60 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PTCD2Q8WV60 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC22.52■■□□□ 1.2
PTCD2Q8WV60 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC22.52■■□□□ 1.2
PTCD2Q8WV60 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PTCD2Q8WV60 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
PTCD2Q8WV60 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
PTCD2Q8WV60 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
PTCD2Q8WV60 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
PTCD2Q8WV60 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PTCD2Q8WV60 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC22.51■■□□□ 1.19
PTCD2Q8WV60 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PTCD2Q8WV60 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
PTCD2Q8WV60 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PTCD2Q8WV60 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
PTCD2Q8WV60 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC22.51■■□□□ 1.19
PTCD2Q8WV60 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PTCD2Q8WV60 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PTCD2Q8WV60 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC22.51■■□□□ 1.19
PTCD2Q8WV60 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
PTCD2Q8WV60 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
PTCD2Q8WV60 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
PTCD2Q8WV60 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PTCD2Q8WV60 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms