Protein–RNA interactions for Protein: Q8WUX9

CHMP7, Charged multivesicular body protein 7, humanhuman

Predicted RBP Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP7Q8WUX9 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC36.92■■■■□ 3.5
CHMP7Q8WUX9 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC36.92■■■■□ 3.5
CHMP7Q8WUX9 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC36.91■■■■□ 3.5
CHMP7Q8WUX9 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC36.91■■■■□ 3.5
CHMP7Q8WUX9 KRT18P6-201ENST00000555540 1265 ntBASIC36.91■■■■□ 3.5
CHMP7Q8WUX9 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC36.91■■■■□ 3.5
CHMP7Q8WUX9 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC36.91■■■■□ 3.5
CHMP7Q8WUX9 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC36.91■■■■□ 3.5
CHMP7Q8WUX9 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC36.9■■■■□ 3.5
CHMP7Q8WUX9 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC36.9■■■■□ 3.5
CHMP7Q8WUX9 PARP1-210ENST00000629232 477 ntTSL 5 BASIC36.9■■■■□ 3.5
CHMP7Q8WUX9 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC36.9■■■■□ 3.5
CHMP7Q8WUX9 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC36.9■■■■□ 3.5
CHMP7Q8WUX9 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC36.9■■■■□ 3.5
CHMP7Q8WUX9 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC36.89■■■■□ 3.5
CHMP7Q8WUX9 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC36.89■■■■□ 3.5
CHMP7Q8WUX9 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC36.89■■■■□ 3.5
CHMP7Q8WUX9 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC36.89■■■■□ 3.5
CHMP7Q8WUX9 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC36.89■■■■□ 3.5
CHMP7Q8WUX9 AL161729.1-201ENST00000604104 1402 ntBASIC36.89■■■■□ 3.5
CHMP7Q8WUX9 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC36.88■■■■□ 3.5
CHMP7Q8WUX9 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC36.88■■■■□ 3.49
CHMP7Q8WUX9 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC36.88■■■■□ 3.49
CHMP7Q8WUX9 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC36.88■■■■□ 3.49
CHMP7Q8WUX9 KRT19P1-201ENST00000405746 1186 ntBASIC36.88■■■■□ 3.49
CHMP7Q8WUX9 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC36.88■■■■□ 3.49
CHMP7Q8WUX9 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC36.88■■■■□ 3.49
CHMP7Q8WUX9 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC36.87■■■■□ 3.49
CHMP7Q8WUX9 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC36.87■■■■□ 3.49
CHMP7Q8WUX9 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC36.87■■■■□ 3.49
CHMP7Q8WUX9 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC36.87■■■■□ 3.49
CHMP7Q8WUX9 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC36.87■■■■□ 3.49
CHMP7Q8WUX9 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC36.87■■■■□ 3.49
CHMP7Q8WUX9 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC36.87■■■■□ 3.49
CHMP7Q8WUX9 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC36.87■■■■□ 3.49
CHMP7Q8WUX9 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC36.87■■■■□ 3.49
CHMP7Q8WUX9 LSR-205ENST00000427250 1606 ntTSL 2 BASIC36.87■■■■□ 3.49
CHMP7Q8WUX9 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC36.87■■■■□ 3.49
CHMP7Q8WUX9 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC36.86■■■■□ 3.49
CHMP7Q8WUX9 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC36.86■■■■□ 3.49
CHMP7Q8WUX9 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC36.86■■■■□ 3.49
CHMP7Q8WUX9 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC36.86■■■■□ 3.49
CHMP7Q8WUX9 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC36.86■■■■□ 3.49
CHMP7Q8WUX9 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC36.86■■■■□ 3.49
CHMP7Q8WUX9 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC36.85■■■■□ 3.49
CHMP7Q8WUX9 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC36.85■■■■□ 3.49
CHMP7Q8WUX9 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC36.85■■■■□ 3.49
CHMP7Q8WUX9 ALDH1A3-203ENST00000557963 1670 ntBASIC36.85■■■■□ 3.49
CHMP7Q8WUX9 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC36.84■■■■□ 3.49
CHMP7Q8WUX9 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC36.84■■■■□ 3.49
CHMP7Q8WUX9 MDK-213ENST00000617138 635 ntTSL 2 BASIC36.84■■■■□ 3.49
CHMP7Q8WUX9 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC36.84■■■■□ 3.49
CHMP7Q8WUX9 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC36.83■■■■□ 3.49
CHMP7Q8WUX9 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC36.83■■■■□ 3.49
CHMP7Q8WUX9 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC36.83■■■■□ 3.49
CHMP7Q8WUX9 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC36.83■■■■□ 3.49
CHMP7Q8WUX9 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC36.82■■■■□ 3.49
CHMP7Q8WUX9 SPI1-203ENST00000533030 661 ntTSL 2 BASIC36.82■■■■□ 3.48
CHMP7Q8WUX9 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC36.82■■■■□ 3.48
CHMP7Q8WUX9 MIR4651-201ENST00000582622 73 ntBASIC36.82■■■■□ 3.48
CHMP7Q8WUX9 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC36.82■■■■□ 3.48
CHMP7Q8WUX9 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC36.82■■■■□ 3.48
CHMP7Q8WUX9 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC36.82■■■■□ 3.48
CHMP7Q8WUX9 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC36.82■■■■□ 3.48
CHMP7Q8WUX9 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC36.81■■■■□ 3.48
CHMP7Q8WUX9 KRT18P11-201ENST00000435214 1283 ntBASIC36.81■■■■□ 3.48
CHMP7Q8WUX9 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC36.81■■■■□ 3.48
CHMP7Q8WUX9 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC36.81■■■■□ 3.48
CHMP7Q8WUX9 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC36.81■■■■□ 3.48
CHMP7Q8WUX9 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC36.8■■■■□ 3.48
CHMP7Q8WUX9 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC36.8■■■■□ 3.48
CHMP7Q8WUX9 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC36.8■■■■□ 3.48
CHMP7Q8WUX9 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC36.8■■■■□ 3.48
CHMP7Q8WUX9 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC36.8■■■■□ 3.48
CHMP7Q8WUX9 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC36.8■■■■□ 3.48
CHMP7Q8WUX9 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC36.8■■■■□ 3.48
CHMP7Q8WUX9 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC36.8■■■■□ 3.48
CHMP7Q8WUX9 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC36.8■■■■□ 3.48
CHMP7Q8WUX9 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC36.79■■■■□ 3.48
CHMP7Q8WUX9 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC36.79■■■■□ 3.48
CHMP7Q8WUX9 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC36.79■■■■□ 3.48
CHMP7Q8WUX9 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC36.79■■■■□ 3.48
CHMP7Q8WUX9 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC36.79■■■■□ 3.48
CHMP7Q8WUX9 AC093827.2-201ENST00000512654 315 ntBASIC36.79■■■■□ 3.48
CHMP7Q8WUX9 KLF13-207ENST00000560473 489 ntTSL 3 BASIC36.79■■■■□ 3.48
CHMP7Q8WUX9 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC36.79■■■■□ 3.48
CHMP7Q8WUX9 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC36.79■■■■□ 3.48
CHMP7Q8WUX9 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC36.79■■■■□ 3.48
CHMP7Q8WUX9 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC36.78■■■■□ 3.48
CHMP7Q8WUX9 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC36.78■■■■□ 3.48
CHMP7Q8WUX9 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC36.78■■■■□ 3.48
CHMP7Q8WUX9 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC36.78■■■■□ 3.48
CHMP7Q8WUX9 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC36.78■■■■□ 3.48
CHMP7Q8WUX9 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC36.78■■■■□ 3.48
CHMP7Q8WUX9 AL121832.2-201ENST00000610979 668 ntBASIC36.78■■■■□ 3.48
CHMP7Q8WUX9 AL050303.2-201ENST00000619798 666 ntBASIC36.78■■■■□ 3.48
CHMP7Q8WUX9 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC36.78■■■■□ 3.48
CHMP7Q8WUX9 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC36.77■■■■□ 3.48
CHMP7Q8WUX9 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC36.77■■■■□ 3.48
CHMP7Q8WUX9 TSPY6P-201ENST00000448518 926 ntBASIC36.77■■■■□ 3.48
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms