Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RAB42Q8N4Z0 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.68■■□□□ 1.06
RAB42Q8N4Z0 PEMT-206ENST00000435340 960 ntTSL 5 BASIC21.68■■□□□ 1.06
RAB42Q8N4Z0 AC099791.2-201ENST00000605725 427 ntBASIC21.68■■□□□ 1.06
RAB42Q8N4Z0 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.68■■□□□ 1.06
RAB42Q8N4Z0 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RAB42Q8N4Z0 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
RAB42Q8N4Z0 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.67■■□□□ 1.06
RAB42Q8N4Z0 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RAB42Q8N4Z0 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.67■■□□□ 1.06
RAB42Q8N4Z0 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RAB42Q8N4Z0 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
RAB42Q8N4Z0 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
RAB42Q8N4Z0 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RAB42Q8N4Z0 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.67■■□□□ 1.06
RAB42Q8N4Z0 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC21.67■■□□□ 1.06
RAB42Q8N4Z0 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RAB42Q8N4Z0 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.67■■□□□ 1.06
RAB42Q8N4Z0 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.66■■□□□ 1.06
RAB42Q8N4Z0 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
RAB42Q8N4Z0 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RAB42Q8N4Z0 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
RAB42Q8N4Z0 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.66■■□□□ 1.06
RAB42Q8N4Z0 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RAB42Q8N4Z0 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RAB42Q8N4Z0 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.66■■□□□ 1.06
RAB42Q8N4Z0 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
RAB42Q8N4Z0 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
RAB42Q8N4Z0 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC21.66■■□□□ 1.06
RAB42Q8N4Z0 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
RAB42Q8N4Z0 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.66■■□□□ 1.06
RAB42Q8N4Z0 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.66■■□□□ 1.06
RAB42Q8N4Z0 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
RAB42Q8N4Z0 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
RAB42Q8N4Z0 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
RAB42Q8N4Z0 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC21.65■■□□□ 1.06
RAB42Q8N4Z0 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.65■■□□□ 1.06
RAB42Q8N4Z0 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RAB42Q8N4Z0 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
RAB42Q8N4Z0 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RAB42Q8N4Z0 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.65■■□□□ 1.06
RAB42Q8N4Z0 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
RAB42Q8N4Z0 SYT6-210ENST00000641643 1587 ntBASIC21.65■■□□□ 1.06
RAB42Q8N4Z0 AL353803.4-201ENST00000565882 1934 ntBASIC21.65■■□□□ 1.06
RAB42Q8N4Z0 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
RAB42Q8N4Z0 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
RAB42Q8N4Z0 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.64■■□□□ 1.06
RAB42Q8N4Z0 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.64■■□□□ 1.06
RAB42Q8N4Z0 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
RAB42Q8N4Z0 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
RAB42Q8N4Z0 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.64■■□□□ 1.05
RAB42Q8N4Z0 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RAB42Q8N4Z0 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC21.64■■□□□ 1.05
RAB42Q8N4Z0 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RAB42Q8N4Z0 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RAB42Q8N4Z0 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
RAB42Q8N4Z0 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RAB42Q8N4Z0 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC21.63■■□□□ 1.05
RAB42Q8N4Z0 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC21.63■■□□□ 1.05
RAB42Q8N4Z0 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RAB42Q8N4Z0 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.63■■□□□ 1.05
RAB42Q8N4Z0 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
RAB42Q8N4Z0 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RAB42Q8N4Z0 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RAB42Q8N4Z0 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RAB42Q8N4Z0 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.62■■□□□ 1.05
RAB42Q8N4Z0 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.62■■□□□ 1.05
RAB42Q8N4Z0 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.62■■□□□ 1.05
RAB42Q8N4Z0 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
RAB42Q8N4Z0 SF1-220ENST00000626028 704 ntTSL 2 BASIC21.62■■□□□ 1.05
RAB42Q8N4Z0 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
RAB42Q8N4Z0 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
RAB42Q8N4Z0 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RAB42Q8N4Z0 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RAB42Q8N4Z0 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RAB42Q8N4Z0 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
RAB42Q8N4Z0 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.62■■□□□ 1.05
RAB42Q8N4Z0 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.62■■□□□ 1.05
RAB42Q8N4Z0 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.62■■□□□ 1.05
RAB42Q8N4Z0 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
RAB42Q8N4Z0 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.61■■□□□ 1.05
RAB42Q8N4Z0 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
RAB42Q8N4Z0 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.61■■□□□ 1.05
RAB42Q8N4Z0 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.61■■□□□ 1.05
RAB42Q8N4Z0 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RAB42Q8N4Z0 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.61■■□□□ 1.05
RAB42Q8N4Z0 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RAB42Q8N4Z0 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.61■■□□□ 1.05
RAB42Q8N4Z0 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC21.61■■□□□ 1.05
RAB42Q8N4Z0 AL138724.1-201ENST00000606771 1088 ntBASIC21.61■■□□□ 1.05
RAB42Q8N4Z0 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RAB42Q8N4Z0 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
RAB42Q8N4Z0 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.61■■□□□ 1.05
RAB42Q8N4Z0 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
RAB42Q8N4Z0 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
RAB42Q8N4Z0 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
RAB42Q8N4Z0 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RAB42Q8N4Z0 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RAB42Q8N4Z0 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC21.6■■□□□ 1.05
RAB42Q8N4Z0 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms