Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.17■□□□□ 0.98
ARHGEF39Q8N4T4 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
ARHGEF39Q8N4T4 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
ARHGEF39Q8N4T4 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
ARHGEF39Q8N4T4 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
ARHGEF39Q8N4T4 AL353803.4-201ENST00000565882 1934 ntBASIC21.16■□□□□ 0.98
ARHGEF39Q8N4T4 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
ARHGEF39Q8N4T4 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ARHGEF39Q8N4T4 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ARHGEF39Q8N4T4 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
ARHGEF39Q8N4T4 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC21.16■□□□□ 0.98
ARHGEF39Q8N4T4 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.16■□□□□ 0.98
ARHGEF39Q8N4T4 AC005837.3-201ENST00000612163 286 ntBASIC21.16■□□□□ 0.98
ARHGEF39Q8N4T4 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ARHGEF39Q8N4T4 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
ARHGEF39Q8N4T4 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ARHGEF39Q8N4T4 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.15■□□□□ 0.98
ARHGEF39Q8N4T4 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ARHGEF39Q8N4T4 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ARHGEF39Q8N4T4 EDA-201ENST00000338901 1233 ntBASIC21.15■□□□□ 0.98
ARHGEF39Q8N4T4 SUDS3P1-201ENST00000505831 966 ntBASIC21.15■□□□□ 0.98
ARHGEF39Q8N4T4 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ARHGEF39Q8N4T4 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.15■□□□□ 0.98
ARHGEF39Q8N4T4 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.15■□□□□ 0.98
ARHGEF39Q8N4T4 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
ARHGEF39Q8N4T4 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
ARHGEF39Q8N4T4 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
ARHGEF39Q8N4T4 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ARHGEF39Q8N4T4 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC21.14■□□□□ 0.97
ARHGEF39Q8N4T4 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC21.14■□□□□ 0.97
ARHGEF39Q8N4T4 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
ARHGEF39Q8N4T4 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ARHGEF39Q8N4T4 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
ARHGEF39Q8N4T4 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ARHGEF39Q8N4T4 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.13■□□□□ 0.97
ARHGEF39Q8N4T4 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ARHGEF39Q8N4T4 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ARHGEF39Q8N4T4 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.13■□□□□ 0.97
ARHGEF39Q8N4T4 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ARHGEF39Q8N4T4 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ARHGEF39Q8N4T4 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ARHGEF39Q8N4T4 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
ARHGEF39Q8N4T4 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ARHGEF39Q8N4T4 AC133637.1-201ENST00000624115 1537 ntBASIC21.13■□□□□ 0.97
ARHGEF39Q8N4T4 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ARHGEF39Q8N4T4 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ARHGEF39Q8N4T4 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ARHGEF39Q8N4T4 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ARHGEF39Q8N4T4 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ARHGEF39Q8N4T4 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ARHGEF39Q8N4T4 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.12■□□□□ 0.97
ARHGEF39Q8N4T4 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ARHGEF39Q8N4T4 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
ARHGEF39Q8N4T4 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.11■□□□□ 0.97
ARHGEF39Q8N4T4 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
ARHGEF39Q8N4T4 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ARHGEF39Q8N4T4 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.11■□□□□ 0.97
ARHGEF39Q8N4T4 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.11■□□□□ 0.97
ARHGEF39Q8N4T4 AP001330.3-201ENST00000520123 633 ntBASIC21.11■□□□□ 0.97
ARHGEF39Q8N4T4 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC21.11■□□□□ 0.97
ARHGEF39Q8N4T4 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ARHGEF39Q8N4T4 AL355001.2-201ENST00000620617 1191 ntBASIC21.11■□□□□ 0.97
ARHGEF39Q8N4T4 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ARHGEF39Q8N4T4 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
ARHGEF39Q8N4T4 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ARHGEF39Q8N4T4 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.11■□□□□ 0.97
ARHGEF39Q8N4T4 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
ARHGEF39Q8N4T4 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.1■□□□□ 0.97
ARHGEF39Q8N4T4 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ARHGEF39Q8N4T4 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
ARHGEF39Q8N4T4 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
ARHGEF39Q8N4T4 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.1■□□□□ 0.97
ARHGEF39Q8N4T4 AL136967.2-201ENST00000623968 743 ntBASIC21.1■□□□□ 0.97
ARHGEF39Q8N4T4 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
ARHGEF39Q8N4T4 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.1■□□□□ 0.97
ARHGEF39Q8N4T4 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC21.1■□□□□ 0.97
ARHGEF39Q8N4T4 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
ARHGEF39Q8N4T4 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
ARHGEF39Q8N4T4 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
ARHGEF39Q8N4T4 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ARHGEF39Q8N4T4 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.09■□□□□ 0.97
ARHGEF39Q8N4T4 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ARHGEF39Q8N4T4 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
ARHGEF39Q8N4T4 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.09■□□□□ 0.97
ARHGEF39Q8N4T4 MIR939-201ENST00000401314 82 ntBASIC21.09■□□□□ 0.97
ARHGEF39Q8N4T4 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
ARHGEF39Q8N4T4 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
ARHGEF39Q8N4T4 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC21.09■□□□□ 0.97
ARHGEF39Q8N4T4 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.09■□□□□ 0.97
ARHGEF39Q8N4T4 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ARHGEF39Q8N4T4 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ARHGEF39Q8N4T4 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
ARHGEF39Q8N4T4 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.09■□□□□ 0.97
ARHGEF39Q8N4T4 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
ARHGEF39Q8N4T4 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
ARHGEF39Q8N4T4 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ARHGEF39Q8N4T4 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.08■□□□□ 0.97
ARHGEF39Q8N4T4 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
ARHGEF39Q8N4T4 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
ARHGEF39Q8N4T4 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 186.5 ms