Protein–RNA interactions for Protein: Q8N3S3

PHTF2, Putative homeodomain transcription factor 2, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2Q8N3S3 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
PHTF2Q8N3S3 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC23.09■■□□□ 1.29
PHTF2Q8N3S3 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
PHTF2Q8N3S3 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
PHTF2Q8N3S3 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
PHTF2Q8N3S3 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PHTF2Q8N3S3 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PHTF2Q8N3S3 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
PHTF2Q8N3S3 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
PHTF2Q8N3S3 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
PHTF2Q8N3S3 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
PHTF2Q8N3S3 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
PHTF2Q8N3S3 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
PHTF2Q8N3S3 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
PHTF2Q8N3S3 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC23.07■■□□□ 1.28
PHTF2Q8N3S3 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PHTF2Q8N3S3 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
PHTF2Q8N3S3 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
PHTF2Q8N3S3 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC23.07■■□□□ 1.28
PHTF2Q8N3S3 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC23.07■■□□□ 1.28
PHTF2Q8N3S3 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
PHTF2Q8N3S3 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC23.06■■□□□ 1.28
PHTF2Q8N3S3 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
PHTF2Q8N3S3 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PHTF2Q8N3S3 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC23.06■■□□□ 1.28
PHTF2Q8N3S3 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
PHTF2Q8N3S3 SNX3-202ENST00000349379 890 ntTSL 2 BASIC23.06■■□□□ 1.28
PHTF2Q8N3S3 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC23.06■■□□□ 1.28
PHTF2Q8N3S3 BX842568.3-201ENST00000418104 571 ntBASIC23.06■■□□□ 1.28
PHTF2Q8N3S3 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PHTF2Q8N3S3 AC233992.3-201ENST00000607491 485 ntBASIC23.06■■□□□ 1.28
PHTF2Q8N3S3 MIR6821-201ENST00000617625 74 ntBASIC23.06■■□□□ 1.28
PHTF2Q8N3S3 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC23.06■■□□□ 1.28
PHTF2Q8N3S3 AC012676.1-201ENST00000574705 1949 ntBASIC23.06■■□□□ 1.28
PHTF2Q8N3S3 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
PHTF2Q8N3S3 AC068473.5-201ENST00000616428 2072 ntBASIC23.05■■□□□ 1.28
PHTF2Q8N3S3 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
PHTF2Q8N3S3 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC23.05■■□□□ 1.28
PHTF2Q8N3S3 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC23.05■■□□□ 1.28
PHTF2Q8N3S3 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PHTF2Q8N3S3 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC23.05■■□□□ 1.28
PHTF2Q8N3S3 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC23.05■■□□□ 1.28
PHTF2Q8N3S3 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC23.05■■□□□ 1.28
PHTF2Q8N3S3 MIR5787-201ENST00000611784 55 ntBASIC23.05■■□□□ 1.28
PHTF2Q8N3S3 LINC00543-201ENST00000567234 1845 ntBASIC23.05■■□□□ 1.28
PHTF2Q8N3S3 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PHTF2Q8N3S3 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PHTF2Q8N3S3 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC23.05■■□□□ 1.28
PHTF2Q8N3S3 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC23.05■■□□□ 1.28
PHTF2Q8N3S3 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
PHTF2Q8N3S3 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
PHTF2Q8N3S3 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
PHTF2Q8N3S3 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC23.04■■□□□ 1.28
PHTF2Q8N3S3 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC23.04■■□□□ 1.28
PHTF2Q8N3S3 AC097381.1-201ENST00000429019 1296 ntBASIC23.04■■□□□ 1.28
PHTF2Q8N3S3 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
PHTF2Q8N3S3 pRNA.6-201ENST00000610482 90 ntBASIC23.04■■□□□ 1.28
PHTF2Q8N3S3 pRNA.5-201ENST00000612139 90 ntBASIC23.04■■□□□ 1.28
PHTF2Q8N3S3 pRNA.11-201ENST00000618423 90 ntBASIC23.04■■□□□ 1.28
PHTF2Q8N3S3 pRNA.13-201ENST00000619112 90 ntBASIC23.04■■□□□ 1.28
PHTF2Q8N3S3 MPST-208ENST00000628507 698 ntTSL 5 BASIC23.04■■□□□ 1.28
PHTF2Q8N3S3 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
PHTF2Q8N3S3 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PHTF2Q8N3S3 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC23.04■■□□□ 1.28
PHTF2Q8N3S3 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC23.04■■□□□ 1.28
PHTF2Q8N3S3 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
PHTF2Q8N3S3 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
PHTF2Q8N3S3 AC141586.4-201ENST00000624558 1573 ntBASIC23.03■■□□□ 1.28
PHTF2Q8N3S3 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PHTF2Q8N3S3 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
PHTF2Q8N3S3 RHOF-204ENST00000537265 699 ntTSL 2 BASIC23.03■■□□□ 1.28
PHTF2Q8N3S3 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
PHTF2Q8N3S3 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
PHTF2Q8N3S3 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC23.03■■□□□ 1.28
PHTF2Q8N3S3 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
PHTF2Q8N3S3 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PHTF2Q8N3S3 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PHTF2Q8N3S3 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC23.02■■□□□ 1.28
PHTF2Q8N3S3 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC23.02■■□□□ 1.28
PHTF2Q8N3S3 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
PHTF2Q8N3S3 ASB1-202ENST00000409297 878 ntTSL 5 BASIC23.02■■□□□ 1.28
PHTF2Q8N3S3 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC23.02■■□□□ 1.28
PHTF2Q8N3S3 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC23.02■■□□□ 1.28
PHTF2Q8N3S3 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PHTF2Q8N3S3 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
PHTF2Q8N3S3 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC23.01■■□□□ 1.27
PHTF2Q8N3S3 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC23.01■■□□□ 1.27
PHTF2Q8N3S3 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PHTF2Q8N3S3 IRS3P-201ENST00000223076 1006 ntBASIC23.01■■□□□ 1.27
PHTF2Q8N3S3 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PHTF2Q8N3S3 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PHTF2Q8N3S3 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
PHTF2Q8N3S3 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC23.01■■□□□ 1.27
PHTF2Q8N3S3 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PHTF2Q8N3S3 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
PHTF2Q8N3S3 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
PHTF2Q8N3S3 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC23.01■■□□□ 1.27
PHTF2Q8N3S3 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PHTF2Q8N3S3 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PHTF2Q8N3S3 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms