Protein–RNA interactions for Protein: Q86WB0

ZC3HC1, Nuclear-interacting partner of ALK, humanhuman

Known RBP Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3HC1Q86WB0 ECEL1P1-201ENST00000373592 1742 ntBASIC22.21■■□□□ 1.15
ZC3HC1Q86WB0 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC22.21■■□□□ 1.15
ZC3HC1Q86WB0 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
ZC3HC1Q86WB0 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
ZC3HC1Q86WB0 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC22.21■■□□□ 1.15
ZC3HC1Q86WB0 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
ZC3HC1Q86WB0 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC22.2■■□□□ 1.15
ZC3HC1Q86WB0 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.15
ZC3HC1Q86WB0 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
ZC3HC1Q86WB0 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
ZC3HC1Q86WB0 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
ZC3HC1Q86WB0 LINC00526-201ENST00000581067 1875 ntBASIC22.2■■□□□ 1.14
ZC3HC1Q86WB0 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
ZC3HC1Q86WB0 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
ZC3HC1Q86WB0 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
ZC3HC1Q86WB0 CLTA-206ENST00000466396 695 ntTSL 2 BASIC22.2■■□□□ 1.14
ZC3HC1Q86WB0 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
ZC3HC1Q86WB0 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
ZC3HC1Q86WB0 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC22.2■■□□□ 1.14
ZC3HC1Q86WB0 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC22.2■■□□□ 1.14
ZC3HC1Q86WB0 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC22.2■■□□□ 1.14
ZC3HC1Q86WB0 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC22.2■■□□□ 1.14
ZC3HC1Q86WB0 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
ZC3HC1Q86WB0 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC22.19■■□□□ 1.14
ZC3HC1Q86WB0 LSR-203ENST00000360798 1963 ntTSL 2 BASIC22.19■■□□□ 1.14
ZC3HC1Q86WB0 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC22.19■■□□□ 1.14
ZC3HC1Q86WB0 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC22.19■■□□□ 1.14
ZC3HC1Q86WB0 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
ZC3HC1Q86WB0 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
ZC3HC1Q86WB0 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC22.19■■□□□ 1.14
ZC3HC1Q86WB0 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
ZC3HC1Q86WB0 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
ZC3HC1Q86WB0 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
ZC3HC1Q86WB0 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
ZC3HC1Q86WB0 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
ZC3HC1Q86WB0 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
ZC3HC1Q86WB0 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
ZC3HC1Q86WB0 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
ZC3HC1Q86WB0 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
ZC3HC1Q86WB0 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
ZC3HC1Q86WB0 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC22.18■■□□□ 1.14
ZC3HC1Q86WB0 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
ZC3HC1Q86WB0 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
ZC3HC1Q86WB0 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC22.18■■□□□ 1.14
ZC3HC1Q86WB0 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
ZC3HC1Q86WB0 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
ZC3HC1Q86WB0 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
ZC3HC1Q86WB0 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC22.17■■□□□ 1.14
ZC3HC1Q86WB0 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
ZC3HC1Q86WB0 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC22.17■■□□□ 1.14
ZC3HC1Q86WB0 RNF146-205ENST00000477776 762 ntTSL 3 BASIC22.17■■□□□ 1.14
ZC3HC1Q86WB0 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC22.17■■□□□ 1.14
ZC3HC1Q86WB0 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
ZC3HC1Q86WB0 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
ZC3HC1Q86WB0 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
ZC3HC1Q86WB0 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
ZC3HC1Q86WB0 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
ZC3HC1Q86WB0 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
ZC3HC1Q86WB0 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
ZC3HC1Q86WB0 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC22.16■■□□□ 1.14
ZC3HC1Q86WB0 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
ZC3HC1Q86WB0 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
ZC3HC1Q86WB0 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
ZC3HC1Q86WB0 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
ZC3HC1Q86WB0 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC22.16■■□□□ 1.14
ZC3HC1Q86WB0 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC22.16■■□□□ 1.14
ZC3HC1Q86WB0 AC092028.1-203ENST00000608262 953 ntBASIC22.16■■□□□ 1.14
ZC3HC1Q86WB0 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
ZC3HC1Q86WB0 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
ZC3HC1Q86WB0 AC127496.7-201ENST00000625110 1798 ntBASIC22.16■■□□□ 1.14
ZC3HC1Q86WB0 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
ZC3HC1Q86WB0 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
ZC3HC1Q86WB0 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
ZC3HC1Q86WB0 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
ZC3HC1Q86WB0 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
ZC3HC1Q86WB0 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC22.15■■□□□ 1.14
ZC3HC1Q86WB0 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC22.15■■□□□ 1.14
ZC3HC1Q86WB0 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC22.15■■□□□ 1.14
ZC3HC1Q86WB0 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC22.15■■□□□ 1.14
ZC3HC1Q86WB0 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
ZC3HC1Q86WB0 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
ZC3HC1Q86WB0 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
ZC3HC1Q86WB0 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC22.15■■□□□ 1.14
ZC3HC1Q86WB0 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
ZC3HC1Q86WB0 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
ZC3HC1Q86WB0 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
ZC3HC1Q86WB0 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
ZC3HC1Q86WB0 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
ZC3HC1Q86WB0 AC242852.2-201ENST00000615738 1807 ntBASIC22.14■■□□□ 1.13
ZC3HC1Q86WB0 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC22.14■■□□□ 1.13
ZC3HC1Q86WB0 LINC01529-204ENST00000636474 1715 ntBASIC22.14■■□□□ 1.13
ZC3HC1Q86WB0 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
ZC3HC1Q86WB0 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
ZC3HC1Q86WB0 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
ZC3HC1Q86WB0 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC22.13■■□□□ 1.13
ZC3HC1Q86WB0 LINC00565-201ENST00000562710 2331 ntBASIC22.13■■□□□ 1.13
ZC3HC1Q86WB0 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
ZC3HC1Q86WB0 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
ZC3HC1Q86WB0 Z92544.1-202ENST00000571933 1220 ntBASIC22.13■■□□□ 1.13
ZC3HC1Q86WB0 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC22.13■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms