Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LCA10Q71F78 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LCA10Q71F78 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LCA10Q71F78 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC11.94□□□□□ -0.5
LCA10Q71F78 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
LCA10Q71F78 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
LCA10Q71F78 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC11.94□□□□□ -0.5
LCA10Q71F78 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC11.94□□□□□ -0.5
LCA10Q71F78 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
LCA10Q71F78 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
LCA10Q71F78 LSR-203ENST00000360798 1963 ntTSL 2 BASIC11.94□□□□□ -0.5
LCA10Q71F78 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
LCA10Q71F78 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
LCA10Q71F78 AC026310.3-201ENST00000625186 2373 ntBASIC11.93□□□□□ -0.5
LCA10Q71F78 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
LCA10Q71F78 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
LCA10Q71F78 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
LCA10Q71F78 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
LCA10Q71F78 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
LCA10Q71F78 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
LCA10Q71F78 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
LCA10Q71F78 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
LCA10Q71F78 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
LCA10Q71F78 MIR219A2-201ENST00000608502 1504 ntBASIC11.93□□□□□ -0.5
LCA10Q71F78 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
LCA10Q71F78 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC11.93□□□□□ -0.5
LCA10Q71F78 AC008813.1-201ENST00000536597 885 ntBASIC11.93□□□□□ -0.5
LCA10Q71F78 HGH1-207ENST00000628266 258 ntTSL 5 BASIC11.93□□□□□ -0.5
LCA10Q71F78 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
LCA10Q71F78 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
LCA10Q71F78 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
LCA10Q71F78 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
LCA10Q71F78 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
LCA10Q71F78 PODN-203ENST00000395871 2744 ntTSL 5 BASIC11.93□□□□□ -0.5
LCA10Q71F78 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
LCA10Q71F78 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
LCA10Q71F78 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
LCA10Q71F78 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
LCA10Q71F78 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
LCA10Q71F78 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
LCA10Q71F78 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
LCA10Q71F78 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
LCA10Q71F78 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
LCA10Q71F78 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LCA10Q71F78 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LCA10Q71F78 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
LCA10Q71F78 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LCA10Q71F78 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LCA10Q71F78 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC11.92□□□□□ -0.5
LCA10Q71F78 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LCA10Q71F78 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC11.92□□□□□ -0.5
LCA10Q71F78 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
LCA10Q71F78 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LCA10Q71F78 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LCA10Q71F78 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC11.91□□□□□ -0.5
LCA10Q71F78 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LCA10Q71F78 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LCA10Q71F78 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
LCA10Q71F78 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LCA10Q71F78 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC11.91□□□□□ -0.5
LCA10Q71F78 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
LCA10Q71F78 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LCA10Q71F78 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC11.91□□□□□ -0.5
LCA10Q71F78 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC11.91□□□□□ -0.5
LCA10Q71F78 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC11.91□□□□□ -0.5
LCA10Q71F78 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
LCA10Q71F78 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC11.91□□□□□ -0.5
LCA10Q71F78 DUX4L13-201ENST00000554103 1267 ntBASIC11.91□□□□□ -0.5
LCA10Q71F78 DUX4L15-201ENST00000611059 1267 ntBASIC11.91□□□□□ -0.5
LCA10Q71F78 DUX4L23-201ENST00000615195 1269 ntBASIC11.91□□□□□ -0.5
LCA10Q71F78 DUX4L24-201ENST00000617576 1269 ntBASIC11.91□□□□□ -0.5
LCA10Q71F78 DUX4L22-201ENST00000618238 1269 ntBASIC11.91□□□□□ -0.5
LCA10Q71F78 DUX4L20-201ENST00000619712 1269 ntBASIC11.91□□□□□ -0.5
LCA10Q71F78 DUX4L21-201ENST00000622058 1269 ntBASIC11.91□□□□□ -0.5
LCA10Q71F78 DUX4L10-201ENST00000622460 1267 ntBASIC11.91□□□□□ -0.5
LCA10Q71F78 DUX4L25-201ENST00000624915 1269 ntBASIC11.91□□□□□ -0.5
LCA10Q71F78 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LCA10Q71F78 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LCA10Q71F78 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC11.91□□□□□ -0.5
LCA10Q71F78 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LCA10Q71F78 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LCA10Q71F78 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LCA10Q71F78 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LCA10Q71F78 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC11.91□□□□□ -0.5
LCA10Q71F78 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LCA10Q71F78 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
LCA10Q71F78 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
LCA10Q71F78 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
LCA10Q71F78 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
LCA10Q71F78 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
LCA10Q71F78 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
LCA10Q71F78 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC11.9□□□□□ -0.5
LCA10Q71F78 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC11.9□□□□□ -0.5
LCA10Q71F78 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC11.9□□□□□ -0.5
LCA10Q71F78 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
LCA10Q71F78 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
LCA10Q71F78 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
LCA10Q71F78 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
LCA10Q71F78 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
LCA10Q71F78 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC11.9□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms