Protein–RNA interactions for Protein: Q2M2D7

TBC1D28, TBC1 domain family member 28, humanhuman

Predictions only

Length 210 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D28Q2M2D7 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC19.36■□□□□ 0.69
TBC1D28Q2M2D7 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TBC1D28Q2M2D7 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TBC1D28Q2M2D7 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
TBC1D28Q2M2D7 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.36■□□□□ 0.69
TBC1D28Q2M2D7 DUX4L19-201ENST00000557448 1267 ntBASIC19.36■□□□□ 0.69
TBC1D28Q2M2D7 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
TBC1D28Q2M2D7 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
TBC1D28Q2M2D7 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
TBC1D28Q2M2D7 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
TBC1D28Q2M2D7 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TBC1D28Q2M2D7 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TBC1D28Q2M2D7 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TBC1D28Q2M2D7 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TBC1D28Q2M2D7 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TBC1D28Q2M2D7 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.35■□□□□ 0.69
TBC1D28Q2M2D7 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TBC1D28Q2M2D7 PEMT-206ENST00000435340 960 ntTSL 5 BASIC19.35■□□□□ 0.69
TBC1D28Q2M2D7 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
TBC1D28Q2M2D7 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TBC1D28Q2M2D7 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
TBC1D28Q2M2D7 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
TBC1D28Q2M2D7 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TBC1D28Q2M2D7 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TBC1D28Q2M2D7 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.34■□□□□ 0.69
TBC1D28Q2M2D7 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TBC1D28Q2M2D7 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.34■□□□□ 0.69
TBC1D28Q2M2D7 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TBC1D28Q2M2D7 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.34■□□□□ 0.69
TBC1D28Q2M2D7 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.34■□□□□ 0.69
TBC1D28Q2M2D7 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.34■□□□□ 0.69
TBC1D28Q2M2D7 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TBC1D28Q2M2D7 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.34■□□□□ 0.69
TBC1D28Q2M2D7 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.33■□□□□ 0.69
TBC1D28Q2M2D7 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.69
TBC1D28Q2M2D7 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.33■□□□□ 0.69
TBC1D28Q2M2D7 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TBC1D28Q2M2D7 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
TBC1D28Q2M2D7 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.33■□□□□ 0.69
TBC1D28Q2M2D7 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC19.33■□□□□ 0.69
TBC1D28Q2M2D7 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TBC1D28Q2M2D7 DUSP8P5-201ENST00000422884 1815 ntBASIC19.33■□□□□ 0.69
TBC1D28Q2M2D7 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TBC1D28Q2M2D7 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.33■□□□□ 0.68
TBC1D28Q2M2D7 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TBC1D28Q2M2D7 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.33■□□□□ 0.68
TBC1D28Q2M2D7 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
TBC1D28Q2M2D7 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TBC1D28Q2M2D7 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
TBC1D28Q2M2D7 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
TBC1D28Q2M2D7 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.68
TBC1D28Q2M2D7 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TBC1D28Q2M2D7 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TBC1D28Q2M2D7 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.32■□□□□ 0.68
TBC1D28Q2M2D7 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
TBC1D28Q2M2D7 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.32■□□□□ 0.68
TBC1D28Q2M2D7 SYT6-210ENST00000641643 1587 ntBASIC19.32■□□□□ 0.68
TBC1D28Q2M2D7 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TBC1D28Q2M2D7 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.32■□□□□ 0.68
TBC1D28Q2M2D7 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TBC1D28Q2M2D7 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
TBC1D28Q2M2D7 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TBC1D28Q2M2D7 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TBC1D28Q2M2D7 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC19.32■□□□□ 0.68
TBC1D28Q2M2D7 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TBC1D28Q2M2D7 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TBC1D28Q2M2D7 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
TBC1D28Q2M2D7 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TBC1D28Q2M2D7 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.32■□□□□ 0.68
TBC1D28Q2M2D7 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
TBC1D28Q2M2D7 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TBC1D28Q2M2D7 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.31■□□□□ 0.68
TBC1D28Q2M2D7 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
TBC1D28Q2M2D7 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TBC1D28Q2M2D7 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TBC1D28Q2M2D7 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TBC1D28Q2M2D7 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TBC1D28Q2M2D7 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
TBC1D28Q2M2D7 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19.31■□□□□ 0.68
TBC1D28Q2M2D7 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TBC1D28Q2M2D7 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TBC1D28Q2M2D7 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.31■□□□□ 0.68
TBC1D28Q2M2D7 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TBC1D28Q2M2D7 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TBC1D28Q2M2D7 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TBC1D28Q2M2D7 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
TBC1D28Q2M2D7 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TBC1D28Q2M2D7 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TBC1D28Q2M2D7 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
TBC1D28Q2M2D7 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.3■□□□□ 0.68
TBC1D28Q2M2D7 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TBC1D28Q2M2D7 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TBC1D28Q2M2D7 DUSP8P3-201ENST00000399571 1760 ntBASIC19.3■□□□□ 0.68
TBC1D28Q2M2D7 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.3■□□□□ 0.68
TBC1D28Q2M2D7 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TBC1D28Q2M2D7 AC006455.2-201ENST00000429931 906 ntBASIC19.3■□□□□ 0.68
TBC1D28Q2M2D7 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.3■□□□□ 0.68
TBC1D28Q2M2D7 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TBC1D28Q2M2D7 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.3■□□□□ 0.68
TBC1D28Q2M2D7 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms