Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.89■■□□□ 1.1
CLCNKAP51800 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CLCNKAP51800 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC21.89■■□□□ 1.09
CLCNKAP51800 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CLCNKAP51800 GRAMD4P4-201ENST00000613563 1115 ntBASIC21.89■■□□□ 1.09
CLCNKAP51800 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CLCNKAP51800 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.89■■□□□ 1.09
CLCNKAP51800 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CLCNKAP51800 AC079630.1-202ENST00000618127 1840 ntBASIC21.89■■□□□ 1.09
CLCNKAP51800 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CLCNKAP51800 LINC01529-204ENST00000636474 1715 ntBASIC21.89■■□□□ 1.09
CLCNKAP51800 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CLCNKAP51800 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CLCNKAP51800 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CLCNKAP51800 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.88■■□□□ 1.09
CLCNKAP51800 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CLCNKAP51800 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CLCNKAP51800 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
CLCNKAP51800 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
CLCNKAP51800 MIR939-201ENST00000401314 82 ntBASIC21.88■■□□□ 1.09
CLCNKAP51800 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC21.88■■□□□ 1.09
CLCNKAP51800 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.88■■□□□ 1.09
CLCNKAP51800 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.88■■□□□ 1.09
CLCNKAP51800 AL136967.2-201ENST00000623968 743 ntBASIC21.88■■□□□ 1.09
CLCNKAP51800 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CLCNKAP51800 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.88■■□□□ 1.09
CLCNKAP51800 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CLCNKAP51800 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CLCNKAP51800 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CLCNKAP51800 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CLCNKAP51800 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CLCNKAP51800 AP001330.3-201ENST00000520123 633 ntBASIC21.87■■□□□ 1.09
CLCNKAP51800 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.87■■□□□ 1.09
CLCNKAP51800 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
CLCNKAP51800 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CLCNKAP51800 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CLCNKAP51800 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CLCNKAP51800 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CLCNKAP51800 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
CLCNKAP51800 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.87■■□□□ 1.09
CLCNKAP51800 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CLCNKAP51800 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CLCNKAP51800 EBPL-204ENST00000378272 766 ntTSL 3 BASIC21.86■■□□□ 1.09
CLCNKAP51800 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.86■■□□□ 1.09
CLCNKAP51800 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.86■■□□□ 1.09
CLCNKAP51800 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.86■■□□□ 1.09
CLCNKAP51800 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
CLCNKAP51800 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.86■■□□□ 1.09
CLCNKAP51800 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.86■■□□□ 1.09
CLCNKAP51800 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CLCNKAP51800 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
CLCNKAP51800 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CLCNKAP51800 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CLCNKAP51800 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CLCNKAP51800 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC21.85■■□□□ 1.09
CLCNKAP51800 AF213884.3-201ENST00000563833 479 ntBASIC21.85■■□□□ 1.09
CLCNKAP51800 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.85■■□□□ 1.09
CLCNKAP51800 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CLCNKAP51800 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CLCNKAP51800 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CLCNKAP51800 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CLCNKAP51800 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.84■■□□□ 1.09
CLCNKAP51800 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CLCNKAP51800 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CLCNKAP51800 AC091305.1-201ENST00000479476 895 ntBASIC21.84■■□□□ 1.09
CLCNKAP51800 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC21.84■■□□□ 1.09
CLCNKAP51800 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
CLCNKAP51800 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CLCNKAP51800 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
CLCNKAP51800 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CLCNKAP51800 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CLCNKAP51800 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.83■■□□□ 1.09
CLCNKAP51800 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
CLCNKAP51800 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.83■■□□□ 1.09
CLCNKAP51800 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CLCNKAP51800 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.83■■□□□ 1.09
CLCNKAP51800 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.83■■□□□ 1.09
CLCNKAP51800 BX842568.3-201ENST00000418104 571 ntBASIC21.83■■□□□ 1.09
CLCNKAP51800 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.83■■□□□ 1.09
CLCNKAP51800 AC027682.1-201ENST00000562846 899 ntBASIC21.83■■□□□ 1.09
CLCNKAP51800 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.83■■□□□ 1.09
CLCNKAP51800 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.83■■□□□ 1.09
CLCNKAP51800 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
CLCNKAP51800 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CLCNKAP51800 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.83■■□□□ 1.08
CLCNKAP51800 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CLCNKAP51800 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.82■■□□□ 1.08
CLCNKAP51800 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.82■■□□□ 1.08
CLCNKAP51800 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CLCNKAP51800 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CLCNKAP51800 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.82■■□□□ 1.08
CLCNKAP51800 RASA4CP-201ENST00000424092 1398 ntBASIC21.82■■□□□ 1.08
CLCNKAP51800 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CLCNKAP51800 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.82■■□□□ 1.08
CLCNKAP51800 AC133637.1-201ENST00000624115 1537 ntBASIC21.81■■□□□ 1.08
CLCNKAP51800 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.81■■□□□ 1.08
CLCNKAP51800 ANOS2P-203ENST00000472227 1816 ntBASIC21.81■■□□□ 1.08
CLCNKAP51800 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CLCNKAP51800 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CLCNKAP51800 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21.81■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms