Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
RNF144AP50876 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RNF144AP50876 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RNF144AP50876 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.67■□□□□ 0.9
RNF144AP50876 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.67■□□□□ 0.9
RNF144AP50876 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.67■□□□□ 0.9
RNF144AP50876 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.67■□□□□ 0.9
RNF144AP50876 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RNF144AP50876 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
RNF144AP50876 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RNF144AP50876 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RNF144AP50876 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RNF144AP50876 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.67■□□□□ 0.9
RNF144AP50876 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.67■□□□□ 0.9
RNF144AP50876 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF144AP50876 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
RNF144AP50876 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.66■□□□□ 0.9
RNF144AP50876 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.66■□□□□ 0.9
RNF144AP50876 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF144AP50876 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF144AP50876 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
RNF144AP50876 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
RNF144AP50876 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RNF144AP50876 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
RNF144AP50876 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RNF144AP50876 C1orf229-201ENST00000623686 2258 ntBASIC20.66■□□□□ 0.9
RNF144AP50876 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF144AP50876 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.65■□□□□ 0.9
RNF144AP50876 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF144AP50876 AL353803.4-201ENST00000565882 1934 ntBASIC20.65■□□□□ 0.9
RNF144AP50876 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF144AP50876 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF144AP50876 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF144AP50876 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RNF144AP50876 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RNF144AP50876 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.65■□□□□ 0.9
RNF144AP50876 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF144AP50876 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.65■□□□□ 0.9
RNF144AP50876 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF144AP50876 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF144AP50876 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RNF144AP50876 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
RNF144AP50876 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RNF144AP50876 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
RNF144AP50876 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RNF144AP50876 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.64■□□□□ 0.89
RNF144AP50876 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF144AP50876 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RNF144AP50876 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF144AP50876 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.64■□□□□ 0.89
RNF144AP50876 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.64■□□□□ 0.89
RNF144AP50876 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.64■□□□□ 0.89
RNF144AP50876 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.64■□□□□ 0.89
RNF144AP50876 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF144AP50876 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.64■□□□□ 0.89
RNF144AP50876 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF144AP50876 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF144AP50876 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF144AP50876 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RNF144AP50876 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
RNF144AP50876 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF144AP50876 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF144AP50876 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.63■□□□□ 0.89
RNF144AP50876 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.63■□□□□ 0.89
RNF144AP50876 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RNF144AP50876 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF144AP50876 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF144AP50876 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
RNF144AP50876 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
RNF144AP50876 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.63■□□□□ 0.89
RNF144AP50876 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
RNF144AP50876 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF144AP50876 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RNF144AP50876 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF144AP50876 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.62■□□□□ 0.89
RNF144AP50876 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.62■□□□□ 0.89
RNF144AP50876 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF144AP50876 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF144AP50876 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
RNF144AP50876 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF144AP50876 AC009102.2-201ENST00000606772 1639 ntBASIC20.61■□□□□ 0.89
RNF144AP50876 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.61■□□□□ 0.89
RNF144AP50876 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.61■□□□□ 0.89
RNF144AP50876 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
RNF144AP50876 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
RNF144AP50876 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF144AP50876 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF144AP50876 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF144AP50876 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.6■□□□□ 0.89
RNF144AP50876 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF144AP50876 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.6■□□□□ 0.89
RNF144AP50876 MIR6724-1-201ENST00000616420 92 ntBASIC20.6■□□□□ 0.89
RNF144AP50876 MIR6724-2-201ENST00000616483 92 ntBASIC20.6■□□□□ 0.89
RNF144AP50876 MIR6724-4-201ENST00000617390 92 ntBASIC20.6■□□□□ 0.89
RNF144AP50876 MIR6724-3-201ENST00000622482 92 ntBASIC20.6■□□□□ 0.89
RNF144AP50876 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.6■□□□□ 0.89
RNF144AP50876 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF144AP50876 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
RNF144AP50876 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF144AP50876 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms